Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq48913 118 9e-22 >seq48913 Length=4472 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||||| ||||||| |||| || ||| || Sbjct 735 ATGCAGATCTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTCGAGAGCTCC 676 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||||| || ||| ||||| || || ||||| || ||||| Sbjct 675 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 616 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || || | ||||| ||| ||| ||||| Sbjct 615 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 556 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 555 ATCCAGAAGGAGTCCACCCTCCA 533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432972930088895