Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq66251 154 3e-32 seq65788 150 4e-31 seq57533 150 4e-31 seq49680 150 4e-31 seq42015 150 4e-31 seq37153 150 4e-31 seq63570 145 2e-29 seq54603 143 6e-29 seq37129 143 6e-29 seq65093 140 8e-28 seq35527 132 1e-25 seq49679 127 5e-24 seq41198 127 5e-24 seq48913 120 7e-22 seq23607 98.7 2e-15 seq2830 93.3 1e-13 seq25524 91.5 3e-13 seq65323 86.0 1e-11 seq42187 86.0 1e-11 seq57661 84.2 5e-11 >seq66251 Length=5749 Score = 154 bits (170), Expect = 3e-32 Identities = 173/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| ||||| || | ||| || || ||||| || ||||||||| Sbjct 3173 CCACCGCGGAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3114 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 3113 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTG---GTCGGGG 3057 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| || ||||| || || | ||||| || || Sbjct 3056 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGCTAGACTCG 2997 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || |||||||| |||||||| ||||| ||||| |||||||| Sbjct 2996 ACCTCGAGGGTAATCGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 2947 >seq65788 Length=3562 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || ||||| || | ||| || || ||||| || |||||||| Sbjct 1224 CCACCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1165 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 1164 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG---TCGGGG 1108 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| || ||||| || || | |||||||| || Sbjct 1107 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGCTCGACTCG 1048 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 1047 ACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 998 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | || || || ||||| || ||||||||| Sbjct 408 CCGCCGCGCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 349 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || || ||||| || ||||| || | ||| Sbjct 348 AGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGGGGG 289 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| || ||||| || || | |||||||| || || Sbjct 288 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCGACC 229 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 228 TCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 182 >seq57533 Length=4825 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| |||| ||| || || ||||| || ||||||||| Sbjct 2601 CCGCCGCGCAGACGAAGAACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 2660 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| || ||||| || | ||| Sbjct 2661 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 2720 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| ||| || ||||| || || | || |||| || Sbjct 2721 ATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCCGAGCTC---TCG 2777 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| ||||| |||||||||||||| |||||||| Sbjct 2778 ACCTCGAGAGTGATCGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCAT 2827 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || ||||| || | || || || ||||| || |||||||| Sbjct 2373 CCACCGCGCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 2432 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 2433 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 2492 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | |||||||| || || Sbjct 2493 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 2552 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 2553 TCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2599 Score = 138 bits (152), Expect = 3e-27 Identities = 174/234 (74%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| || | |||| || || ||||| || |||||||| Sbjct 2829 CCGCCGCGCAGACGAAGAACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2888 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| ||| || ||| Sbjct 2889 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGA---TCGGGG 2945 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 || || || || |||||||| ||| |||| |||||| || || | || |||| Sbjct 2946 GGAATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATCGTGTCCGAGCTC-- 3002 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || || ||||| ||||| || ||||||||||| |||||||| Sbjct 3003 -TCGACTTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3055 >seq49680 Length=1134 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| |||| ||| || || ||||| || |||||||| Sbjct 817 CCGCCGCGGAGGCGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 876 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| ||| | ||| Sbjct 877 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGG 936 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | || |||| || Sbjct 937 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTC---TCG 993 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 994 ACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 1043 >seq42015 Length=1920 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| || | ||| || || ||||| || |||||||| Sbjct 155 CCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 214 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| ||| | ||| Sbjct 215 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGAGGG 274 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || ||| || ||||| || || | |||||||| || || Sbjct 275 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCGATGGTGTCGCTCGACTCGACC 334 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct 335 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 382 Score = 111 bits (122), Expect = 4e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || |||||||| |||||||| ||| | ||||| || || || |||||||| Sbjct 8 TGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATC 67 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||| || ||||| || || | |||||||| || || ||||| || |||||||| || Sbjct 68 TTCTGCTTGACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCC 127 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| |||||||| Sbjct 128 GTGAGGGTCTTGACGAAGATCTGCAT 153 >seq37153 Length=844 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| ||||| |||| ||| || || ||||| || |||||||| Sbjct 297 CCACCGCGGAGGCGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 238 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || | ||| Sbjct 237 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGG 178 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || |||||||| ||| |||||||| || || | || |||| || Sbjct 177 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGCTC---TCG 121 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 120 ACTTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 71 >seq63570 Length=11955 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | ||| || || ||||| || |||||||| Sbjct 7398 CCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 7339 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| ||| ||| Sbjct 7338 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 7279 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || |||||||| ||| |||||||| || || | || |||| || Sbjct 7278 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATCGTGTCCGAGCTC---TCG 7222 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 7221 ACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 7172 Score = 104 bits (114), Expect = 6e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| || |||||||| ||| |||||||| || || | ||| ||||| Sbjct 7017 GGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGAGGATTCG 6958 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| |||||||| ||||||||||| |||||||| Sbjct 6957 ACCTCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 6908 >seq54603 Length=2606 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | || || || ||||| || ||||||||| Sbjct 2551 CCGCCGCGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2492 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| || ||||| ||| | || Sbjct 2491 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGA 2432 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | |||||||| || || Sbjct 2431 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACC 2372 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 2371 TCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATTTGCAT 2325 >seq37129 Length=1363 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | || || || ||||| || ||||||||| Sbjct 1272 CCGCCGCGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1213 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| || ||||| ||| | || Sbjct 1212 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGA 1153 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | |||||||| || || Sbjct 1152 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACC 1093 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 1092 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 1046 >seq65093 Length=7051 Score = 140 bits (154), Expect = 8e-28 Identities = 168/226 (74%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| || | || || || ||||| || ||||||||| Sbjct 4679 CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 4738 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || ||||| || | || || || |||||||| || ||||| || ||| Sbjct 4739 AGCGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 4798 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || |||||||| ||| || || ||||| || || | |||||||| || || Sbjct 4799 ATGCCTTCCTTGTCCTGGATCTTTTGC-TTGACGTTCTCGATCGTGTCGCTCGACTCGAC 4857 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471 ||||| || |||||||| || || || ||||||||||| |||||| Sbjct 4858 CTCGAGAGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGC 4903 Score = 134 bits (148), Expect = 3e-26 Identities = 171/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | ||| || || || || || |||||||| Sbjct 4286 CCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCC 4345 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 4346 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTG---GTCGGGG 4402 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || |||||||| ||| |||||||| || || | || |||| Sbjct 4403 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTC--- 4459 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| |||||||| ||||||||||| |||||||| Sbjct 4460 TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 4512 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | ||| || || ||||| || ||||||||| Sbjct 5012 CCGCCACGCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 5071 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| || ||||| ||| ||| Sbjct 5072 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGG 5131 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || ||| || ||||| || || | || |||| || Sbjct 5132 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGTGTCCGAGCTC---TCG 5188 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 5189 ACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 5238 >seq35527 Length=2822 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| ||||| || | ||| || || ||||| || |||||||| Sbjct 252 CCACCGCGCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 193 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| ||| || Sbjct 192 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGA 133 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | || |||| || Sbjct 132 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTC---TCG 76 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || ||||| ||||||||||| |||||||| Sbjct 75 ACTTCGAGGGTAATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 26 >seq49679 Length=1067 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | || || || ||||| || ||||||||| Sbjct 825 CCGCCGCGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 884 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| || ||||| || || Sbjct 885 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 944 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| ||| || ||||| || || | || |||| || Sbjct 945 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCCGAGCTC---TCG 1001 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 1002 ACTTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 1051 >seq41198 Length=3949 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| |||| || ||||| || | ||| ||||| ||||| || ||||| || Sbjct 1715 CCACCGCGCAGTCGGAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCC 1656 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| ||| ||| Sbjct 1655 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGCGGG 1596 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || ||| |||||||| || || | || |||| || Sbjct 1595 ATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTC---TCG 1539 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 1538 ACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 1489 >seq48913 Length=4472 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || |||||||| Sbjct 509 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 568 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || ||||| || || ||| Sbjct 569 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGG---TCGGGG 625 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || |||||||| ||| |||||||| || || | ||| ||| Sbjct 626 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGAGCTC--- 682 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 683 TCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 735 >seq23607 Length=196 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/111 (81%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || || |||||||| ||| |||| |||||| || || | |||||||| || Sbjct 14 GGAATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATCGTGTCGCTCGACTC 72 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 73 GACCTCGAGAGTGATCGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 123 >seq2830 Length=160 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Plus Query 288339 GAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||||| |||||||| ||| | ||||| || || || |||||||| ||| ||||| Sbjct 1 GAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCAC 60 Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 |||||| || | || |||| || || ||||| ||||| ||||| |||||||| || Sbjct 61 GTTTTCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGT 117 Query 288456 CTTGACGAATATCTGCAT 288473 ||| || || |||||||| Sbjct 118 CTTCACAAAGATCTGCAT 135 >seq25524 Length=166 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| ||| |||||||| || || | ||| ||||| Sbjct 147 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGAGGATTCG 88 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || |||||||| || ||||| ||||||||||| |||||||| Sbjct 87 ACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 38 >seq65323 Length=85180 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| || | |||||| || || ||||| || || || || ||| | || Sbjct 60406 ATCGGCATGAACGCGGGCCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTGCTC 60347 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||||||||| | || ||| ||||| | | ||| |||||| ||| ||||| || Sbjct 60346 GTGGCACTCGGGTGCGACAAACACTACAACGCCACGAACCCCTTCCCCTGGATGGAGCTG 60287 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || || ||||| || ||||| ||||||||||| || ||| |||| || Sbjct 60286 ATCTCACTCGAGGGCAAGACCAACTTCTTCGAGCGCCGAGTCGGCGAGTA 60237 >seq42187 Length=1775 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| ||||| |||||| || || ||||| ||||| || || || || || Sbjct 698 ATCGGCATGAACGCCGACCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTC 757 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | || ||||| | ||||| ||||| || || || ||| | | ||||| || Sbjct 758 GCCGCCCTCGGCTGCGAGAAGCACTACAACCAGACCAACCCGTTCCCGTGGATGGAGCTC 817 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || || ||||| || ||||| |||||||||||| || ||| |||| || Sbjct 818 ATCTCCCTCGAGGGCAAGACCAACTTCTTCGAACGCCGCGTCGGCGAGTA 867 >seq57661 Length=1717 Score = 84.2 bits (92), Expect = 5e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| ||||| |||||| || || ||||| ||||| || || || || || Sbjct 1020 ATCGGCATGAACGCCGACCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTC 961 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | || ||||| | ||||| ||||| || || || ||| | | ||||| || Sbjct 960 GCCGCCCTCGGCTGCGAGAAGCACTACAACCAGACCAACCCGTTCCCGTGGATGGAGCTC 901 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTAT 269322 || || ||||| || ||||| ||||||||||| || ||| |||| ||| Sbjct 900 ATCTCCCTCGAGGGCAAGACCAACTTCTTCGAGCGCCGCGTCGGCGAGTAT 850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178638218788974