Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq64713 284 6e-72 >seq64713 Length=190342 Score = 284 bits (314), Expect = 6e-72 Identities = 526/766 (69%), Gaps = 7/766 (1%) Strand=Plus/Minus Query 65907 GACACCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCG 65966 || || ||| || | |||||| | | ||||| ||| || || |||| || ||| Sbjct 164049 GAGACGATTTCCTCGGGCTCGCTCGGGCTGGATATCGCGCTGGGTGTCGGCGGCCTGCCG 163990 Query 65967 AGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTC 66026 | ||| ||||| || ||||| |||||||| || || || || ||| | ||| || || Sbjct 163989 AAGGGGCGGGTGGTCGAGATTTACGGTCCGGAATCCTCCGGCAAGACCACGCTGGCGCTG 163930 Query 66027 CACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACAT 66086 ||| |||||||| | ||||||||| || |||| ||||| ||||||||| ||||| Sbjct 163929 CACACGGTGGCCGAGGCCCAGAAGAAAGGCGGCATTTGCGCCTTCATCGACGCTGAACAC 163870 Query 66087 TCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTG 66146 | ||||| || | || ||| |||||| || ||||||| | || || | | Sbjct 163869 GCGCTCGATCCCGTCTATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTTCTGATCTCG 163810 Query 66147 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 66206 ||||| || |||||| ||||| ||||| |||| ||| || || || |||| | Sbjct 163809 CAGCCGGATCATGGCGAACAGGCGCTGGAAATCGCCGACACGCTGGTGCGCTCCGGCGCG 163750 Query 66207 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 66266 || | | ||||||||||| |||||||| ||||||||||| || || |||||||| Sbjct 163749 GTCGATGTGCTGGTTGTGGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAACTCGAAGGC 163690 Query 66267 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 66326 || || || ||| | ||||||||| || || |||||| ||||| |||||||| Sbjct 163689 GAGATGGGCGACAGCCTTCCCGGCCTGCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAG 163630 Query 66327 CTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAG 66386 || |||| | |||| || || |||| | | | | || ||| | ||| | Sbjct 163629 CTCACCGCCTCGATCAACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATG 163570 Query 66387 AAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGC 66446 |||||||| ||| |||||| || || |||||||| || ||||| ||| || Sbjct 163569 AAGATCGGT---GTGATGTACGGCTCGCCGGAAACCACCACTGGCGGTAACGCTTTGAAG 163513 Query 66447 TTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAG-AAGGAAGGCGATGA 66505 |||||||| || ||||| | || | ||| | |||| | | || |||||| |||| || Sbjct 163512 TTCTACGCGTCCGTGCGCCTCGACATTCGCCGCATCGGC-CAGATCAAGGAACGCGACGA 163454 Query 66506 GGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCG 66565 | |||||||| || ||||| ||||| || ||||||||||||||||||||| | Sbjct 163453 AGTGATCGGCAACTCGACCCGCGTCAAGGTGGTGAAGAACAAGCTGGCGCCTCCGTTCAA 163394 Query 66566 CCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTC-CCGCGAGGCTGAACTCCTCG 66624 |||| ||||| |||| | |||||||||||| | || || ||| ||| | |||| Sbjct 163393 GCAGGTCGAGTTCGACATCATGTACGGCGAGGGCGTCTCGAAGCTGGGC-GAAATTCTCG 163335 Query 66625 ACATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTT 66670 | | | ||| ||| || || ||||||| || || ||||| Sbjct 163334 ATCTCGGCGTGAAAGCAGGAATCGTCGAGAAGTCCGGCGCATGGTT 163289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242271719223836