Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq58101 360 2e-94 seq49189 360 2e-94 seq38874 360 2e-94 seq65323 197 1e-45 >seq58101 Length=8023 Score = 360 bits (398), Expect = 2e-94 Identities = 928/1396 (66%), Gaps = 52/1396 (4%) Strand=Plus/Minus Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 || ||||| | | | |||||| ||||||| |||| ||||||||||||||||||||| | Sbjct 5707 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATC 5648 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGAC 94272 | ||| |||||||| |||||||||||||| || ||||| | ||| | || Sbjct 5647 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGA---GGAGAACCGCGCCCGCGAT 5591 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCC 94332 |||||||||| || ||| | || || || || ||||| ||||| |||| | || | Sbjct 5590 CTCTTCTACGGCCTGTGGATTCCCGATCTCTTCATGAAGCGCGTGGAGATGGGCGGCGAC 5531 Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||| || ||||| ||||| ||| ||||| |||| ||| || || | || Sbjct 5530 TGGTCGCTCTTTTGCCCCAACGAAGCCCCCGGCCTGTTTGACTCGTGGGGCAAGGAGTTC 5471 Query 94393 GAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC---CAGGAAGGTTATGGATGCT 94449 || || ||| | || ||||| | ||||| || | | ||| | || | Sbjct 5470 GAGGAGAAGTACGAGCGCTACGAGCAGGAGGGCCGCGCGCGCCGCGTGGTCAAGGC--CC 5413 Query 94450 AGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTG 94509 |||| ||||||| ||| | || ||| | ||||| || ||||||||||| || Sbjct 5412 AGGA-GCTGTGGTTCGCCATCCTCGAGTCTCAGATCGAGACTGGCACGCCCTACATGCTG 5354 Query 94510 TTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 | ||||||| | ||||| |||||||||||||||||||||||| ||| || ||| Sbjct 5353 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCG 5294 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || |||||||| ||| | ||| |||| || || || |||||| | || ||||| |||||| Sbjct 5293 AACCTGTGCACGGAGGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTG 5234 Query 94630 GGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGAT 94689 | ||| || ||| ||| ||| | ||| | || || ||| || Sbjct 5233 GCCTCGCTCGCGCTGCCCAAGTTCAT------------CAC--CAACGGCGA-GTTTGAC 5189 Query 94690 CTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT---GAACCTGAACAGGGTAAT 94745 | || |||| | || || || |||| ||||| |||||| |||| ||| || Sbjct 5188 CACAAGAAGCT---GCACGACGTCGTCAAGG-TGGTCACCAAGAACCTCAACAAGGTGAT 5133 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| ||||||||| || ||||| ||||| ||| || || ||||||| Sbjct 5132 CGACATCAACTACTACCCCGTGCCCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCAT 5073 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865 |||||| || || |||||| | || |||| | |||| |||| | || | || Sbjct 5072 CGGCATTGGAGTGCAGGGTCTGGCCGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAG 5013 Query 94866 TGTCGACGCG-GCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGA 94924 | ||| || ||| | | | | ||| ||||| | ||| || ||| ||| || Sbjct 5012 CGACGAGGCCCGCGAGCTCAACCGCGC-CATCTTCGAGACCATCTACCACGCCGCCCTGG 4954 Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983 || | | | || ||| ||| | ||| | || || | | | || ||| Sbjct 4953 TTGCCTCGAACGAGCTCGCGCAGGTCG-AGGGCAC-CTACCAGAC-CTATGAG-GGCTCG 4898 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 ||| | ||||| | ||| |||||||||||| || ||| |||| || Sbjct 4897 CCCGCGTCCATGGGCAAGCTCCAGCCCGACCTCTGGGGAGTCGTGCCGTCGGACAGGTGG 4838 Query 95044 GACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTG 95103 ||||||| | || ||||| | | | | |||||| || ||| |||| || ||| Sbjct 4837 GACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTG 4778 Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||||||||| || |||||||||| ||||||||||||| || || ||| Sbjct 4777 GCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCC 4718 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| ||||| | |||| | | || | |||||||| || ||| ||||| ||||| || Sbjct 4717 TACACGACCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAG 4658 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG--GGTGACAAGGTCAAGAACCAAC 95281 ||||| || || || ||| | | || | ||| | | | | |||||||| | | Sbjct 4657 CACCTTCTGCGCGAGCTGCAGCAGCGCGGCCTCTGGTCGCCGGC--GCTCAAGAACAAGC 4600 Query 95282 TGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCG 95340 | | | ||| ||||||||| || ||| |||| | | || || || ||||||||| | Sbjct 4599 T-CGTCTCGCACAACGGCTCGGTTCAGCGCATCGAGGAGATCCCCGACGACATCAAGAAG 4541 Query 95341 CTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGC 95400 || |||||||||||||||||| ||||||||||||| || ||||| || || | ||| Sbjct 4540 CTGTACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCATCATCGACATGGCCGCTGATCGC 4481 Query 95401 GGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCG--CG 95458 | ||| |||| |||||| |||| ||||||| ||| || Sbjct 4480 TCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCC--TCGTTCG 4423 Query 95459 GAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATT 95518 || | || || ||| ||||||| ||| | ||||| ||||||||||| ||||| | Sbjct 4422 CCAAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACT 4363 Query 95519 ATTTGCGAACCAGGCC 95534 | | || ||| |||| Sbjct 4362 ACCTTCGCACCCGGCC 4347 Score = 167 bits (184), Expect = 2e-36 Identities = 298/435 (69%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||| | |||||| || || ||| ||||||||| ||| | | || |||| | | | Sbjct 6240 TACTTCGGCTTCAAGACCCTCGAGCGCTCGTACCTCTTCAGGGTCGACGGCAAGATCGTC 6181 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || |||| |||||||| ||| |||| | ||| || |||| || Sbjct 6180 GAGCGACCCCAGCACATGCTCATGCGCGTGGCCGTCGGCCTGCACAAGGACAACATCCCC 6121 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | | | || | | || | ||| ||||||||||| Sbjct 6120 GCCGTGATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACCCCGACG 6061 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || |||||| || ||| |||| || || |||||| | || | ||| Sbjct 6060 CTCTTCAACGCCGGAACCCCGCGCCCGCAGCTGTCGTCTTGCTTCCTGCTCACCATGAAG 6001 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| ||| || || | ||| | ||||||| | ||||| |||||| || | Sbjct 6000 GAGGACTCGATCGAGGGCATCTACGATACCCTCAAGCAGTGTGCCCTCATCTCCAAGTCG 5941 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || || ||| | | || ||| || ||||||||||| Sbjct 5940 GCCGGCGGCATCGGCCTCGCTGCGCACCGCATCCGCGCCTCCAACTCGTACATCCGCGGC 5881 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| |||||||||||||| ||| |||| |||||||| || | |||| || | || ||| Sbjct 5880 ACCAACGGCACCTCCAACGGTCTCATCCCCATGCTCCGCGTATACAACGACACTGCCCGC 5821 Query 94144 TACGTGGACCAGGGT 94158 ||||| ||||| ||| Sbjct 5820 TACGTCGACCAAGGT 5806 >seq49189 Length=7476 Score = 360 bits (398), Expect = 2e-94 Identities = 928/1396 (66%), Gaps = 52/1396 (4%) Strand=Plus/Minus Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 || ||||| | | | |||||| ||||||| |||| ||||||||||||||||||||| | Sbjct 6385 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATC 6326 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGAC 94272 | ||| |||||||| |||||||||||||| || ||||| | ||| | || Sbjct 6325 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGA---GGAGAACCGCGCCCGCGAT 6269 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCC 94332 |||||||||| || ||| | || || || || ||||| ||||| |||| | || | Sbjct 6268 CTCTTCTACGGCCTGTGGATTCCCGATCTCTTCATGAAGCGCGTGGAGATGGGCGGCGAC 6209 Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||| || ||||| ||||| ||| ||||| |||| ||| || || | || Sbjct 6208 TGGTCGCTCTTTTGCCCCAACGAAGCCCCCGGCCTGTTTGACTCGTGGGGCAAGGAGTTC 6149 Query 94393 GAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC---CAGGAAGGTTATGGATGCT 94449 || || ||| | || ||||| | ||||| || | | ||| | || | Sbjct 6148 GAGGAGAAGTACGAGCGCTACGAGCAGGAGGGCCGCGCGCGCCGCGTGGTCAAGGC--CC 6091 Query 94450 AGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTG 94509 |||| ||||||| ||| | || ||| | ||||| || ||||||||||| || Sbjct 6090 AGGA-GCTGTGGTTCGCCATCCTCGAGTCTCAGATCGAGACTGGCACGCCCTACATGCTG 6032 Query 94510 TTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 | ||||||| | ||||| |||||||||||||||||||||||| ||| || ||| Sbjct 6031 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCG 5972 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || |||||||| ||| | ||| |||| || || || |||||| | || ||||| |||||| Sbjct 5971 AACCTGTGCACGGAGGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTG 5912 Query 94630 GGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGAT 94689 | ||| || ||| ||| ||| | ||| | || || ||| || Sbjct 5911 GCCTCGCTCGCGCTGCCCAAGTTCAT------------CAC--CAACGGCGA-GTTTGAC 5867 Query 94690 CTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT---GAACCTGAACAGGGTAAT 94745 | || |||| | || || || |||| ||||| |||||| |||| ||| || Sbjct 5866 CACAAGAAGCT---GCACGACGTCGTCAAGG-TGGTCACCAAGAACCTCAACAAGGTGAT 5811 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| ||||||||| || ||||| ||||| ||| || || ||||||| Sbjct 5810 CGACATCAACTACTACCCCGTGCCCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCAT 5751 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865 |||||| || || |||||| | || |||| | |||| |||| | || | || Sbjct 5750 CGGCATTGGAGTGCAGGGTCTGGCCGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAG 5691 Query 94866 TGTCGACGCG-GCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGA 94924 | ||| || ||| | | | | ||| ||||| | ||| || ||| ||| || Sbjct 5690 CGACGAGGCCCGCGAGCTCAACCGCGC-CATCTTCGAGACCATCTACCACGCCGCCCTGG 5632 Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983 || | | | || ||| ||| | ||| | || || | | | || ||| Sbjct 5631 TTGCCTCGAACGAGCTCGCGCAGGTCG-AGGGCAC-CTACCAGAC-CTATGAG-GGCTCG 5576 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 ||| | ||||| | ||| |||||||||||| || ||| |||| || Sbjct 5575 CCCGCGTCCATGGGCAAGCTCCAGCCCGACCTCTGGGGAGTCGTGCCGTCGGACAGGTGG 5516 Query 95044 GACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTG 95103 ||||||| | || ||||| | | | | |||||| || ||| |||| || ||| Sbjct 5515 GACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTG 5456 Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||||||||| || |||||||||| ||||||||||||| || || ||| Sbjct 5455 GCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCC 5396 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| ||||| | |||| | | || | |||||||| || ||| ||||| ||||| || Sbjct 5395 TACACGACCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAG 5336 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG--GGTGACAAGGTCAAGAACCAAC 95281 ||||| || || || ||| | | || | ||| | | | | |||||||| | | Sbjct 5335 CACCTTCTGCGCGAGCTGCAGCAGCGCGGCCTCTGGTCGCCGGC--GCTCAAGAACAAGC 5278 Query 95282 TGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCG 95340 | | | ||| ||||||||| || ||| |||| | | || || || ||||||||| | Sbjct 5277 T-CGTCTCGCACAACGGCTCGGTTCAGCGCATCGAGGAGATCCCCGACGACATCAAGAAG 5219 Query 95341 CTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGC 95400 || |||||||||||||||||| ||||||||||||| || ||||| || || | ||| Sbjct 5218 CTGTACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCATCATCGACATGGCCGCTGATCGC 5159 Query 95401 GGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCG--CG 95458 | ||| |||| |||||| |||| ||||||| ||| || Sbjct 5158 TCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCC--TCGTTCG 5101 Query 95459 GAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATT 95518 || | || || ||| ||||||| ||| | ||||| ||||||||||| ||||| | Sbjct 5100 CCAAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACT 5041 Query 95519 ATTTGCGAACCAGGCC 95534 | | || ||| |||| Sbjct 5040 ACCTTCGCACCCGGCC 5025 Score = 167 bits (184), Expect = 2e-36 Identities = 298/435 (69%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||| | |||||| || || ||| ||||||||| ||| | | || |||| | | | Sbjct 6918 TACTTCGGCTTCAAGACCCTCGAGCGCTCGTACCTCTTCAGGGTCGACGGCAAGATCGTC 6859 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || |||| |||||||| ||| |||| | ||| || |||| || Sbjct 6858 GAGCGACCCCAGCACATGCTCATGCGCGTGGCCGTCGGCCTGCACAAGGACAACATCCCC 6799 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | | | || | | || | ||| ||||||||||| Sbjct 6798 GCCGTGATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACCCCGACG 6739 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || |||||| || ||| |||| || || |||||| | || | ||| Sbjct 6738 CTCTTCAACGCCGGAACCCCGCGCCCGCAGCTGTCGTCTTGCTTCCTGCTCACCATGAAG 6679 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| ||| || || | ||| | ||||||| | ||||| |||||| || | Sbjct 6678 GAGGACTCGATCGAGGGCATCTACGATACCCTCAAGCAGTGTGCCCTCATCTCCAAGTCG 6619 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || || ||| | | || ||| || ||||||||||| Sbjct 6618 GCCGGCGGCATCGGCCTCGCTGCGCACCGCATCCGCGCCTCCAACTCGTACATCCGCGGC 6559 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| |||||||||||||| ||| |||| |||||||| || | |||| || | || ||| Sbjct 6558 ACCAACGGCACCTCCAACGGTCTCATCCCCATGCTCCGCGTATACAACGACACTGCCCGC 6499 Query 94144 TACGTGGACCAGGGT 94158 ||||| ||||| ||| Sbjct 6498 TACGTCGACCAAGGT 6484 >seq38874 Length=7777 Score = 360 bits (398), Expect = 2e-94 Identities = 928/1396 (66%), Gaps = 52/1396 (4%) Strand=Plus/Plus Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 || ||||| | | | |||||| ||||||| |||| ||||||||||||||||||||| | Sbjct 2071 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATC 2130 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGAC 94272 | ||| |||||||| |||||||||||||| || ||||| | ||| | || Sbjct 2131 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGA---GGAGAACCGCGCCCGCGAT 2187 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCC 94332 |||||||||| || ||| | || || || || ||||| ||||| |||| | || | Sbjct 2188 CTCTTCTACGGCCTGTGGATTCCCGATCTCTTCATGAAGCGCGTGGAGATGGGCGGCGAC 2247 Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||| || ||||| ||||| ||| ||||| |||| ||| || || | || Sbjct 2248 TGGTCGCTCTTTTGCCCCAACGAAGCCCCCGGCCTGTTTGACTCGTGGGGCAAGGAGTTC 2307 Query 94393 GAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC---CAGGAAGGTTATGGATGCT 94449 || || ||| | || ||||| | ||||| || | | ||| | || | Sbjct 2308 GAGGAGAAGTACGAGCGCTACGAGCAGGAGGGCCGCGCGCGCCGCGTGGTCAAGGC--CC 2365 Query 94450 AGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTG 94509 |||| ||||||| ||| | || ||| | ||||| || ||||||||||| || Sbjct 2366 AGGA-GCTGTGGTTCGCCATCCTCGAGTCTCAGATCGAGACTGGCACGCCCTACATGCTG 2424 Query 94510 TTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 | ||||||| | ||||| |||||||||||||||||||||||| ||| || ||| Sbjct 2425 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCG 2484 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || |||||||| ||| | ||| |||| || || || |||||| | || ||||| |||||| Sbjct 2485 AACCTGTGCACGGAGGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTG 2544 Query 94630 GGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGAT 94689 | ||| || ||| ||| ||| | ||| | || || ||| || Sbjct 2545 GCCTCGCTCGCGCTGCCCAAGTTCAT------------CAC--CAACGGCGA-GTTTGAC 2589 Query 94690 CTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT---GAACCTGAACAGGGTAAT 94745 | || |||| | || || || |||| ||||| |||||| |||| ||| || Sbjct 2590 CACAAGAAGCT---GCACGACGTCGTCAAGG-TGGTCACCAAGAACCTCAACAAGGTGAT 2645 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| ||||||||| || ||||| ||||| ||| || || ||||||| Sbjct 2646 CGACATCAACTACTACCCCGTGCCCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCAT 2705 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865 |||||| || || |||||| | || |||| | |||| |||| | || | || Sbjct 2706 CGGCATTGGAGTGCAGGGTCTGGCCGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAG 2765 Query 94866 TGTCGACGCG-GCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGA 94924 | ||| || ||| | | | | ||| ||||| | ||| || ||| ||| || Sbjct 2766 CGACGAGGCCCGCGAGCTCAACCGCGC-CATCTTCGAGACCATCTACCACGCCGCCCTGG 2824 Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983 || | | | || ||| ||| | ||| | || || | | | || ||| Sbjct 2825 TTGCCTCGAACGAGCTCGCGCAGGTCG-AGGGCAC-CTACCAGAC-CTATGAG-GGCTCG 2880 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 ||| | ||||| | ||| |||||||||||| || ||| |||| || Sbjct 2881 CCCGCGTCCATGGGCAAGCTCCAGCCCGACCTCTGGGGAGTCGTGCCGTCGGACAGGTGG 2940 Query 95044 GACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTG 95103 ||||||| | || ||||| | | | | |||||| || ||| |||| || ||| Sbjct 2941 GACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTG 3000 Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||||||||| || |||||||||| ||||||||||||| || || ||| Sbjct 3001 GCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCC 3060 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| ||||| | |||| | | || | |||||||| || ||| ||||| ||||| || Sbjct 3061 TACACGACCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAG 3120 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG--GGTGACAAGGTCAAGAACCAAC 95281 ||||| || || || ||| | | || | ||| | | | | |||||||| | | Sbjct 3121 CACCTTCTGCGCGAGCTGCAGCAGCGCGGCCTCTGGTCGCCGGC--GCTCAAGAACAAGC 3178 Query 95282 TGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCG 95340 | | | ||| ||||||||| || ||| |||| | | || || || ||||||||| | Sbjct 3179 T-CGTCTCGCACAACGGCTCGGTTCAGCGCATCGAGGAGATCCCCGACGACATCAAGAAG 3237 Query 95341 CTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGC 95400 || |||||||||||||||||| ||||||||||||| || ||||| || || | ||| Sbjct 3238 CTGTACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCATCATCGACATGGCCGCTGATCGC 3297 Query 95401 GGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCG--CG 95458 | ||| |||| |||||| |||| ||||||| ||| || Sbjct 3298 TCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCC--TCGTTCG 3355 Query 95459 GAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATT 95518 || | || || ||| ||||||| ||| | ||||| ||||||||||| ||||| | Sbjct 3356 CCAAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACT 3415 Query 95519 ATTTGCGAACCAGGCC 95534 | | || ||| |||| Sbjct 3416 ACCTTCGCACCCGGCC 3431 Score = 167 bits (184), Expect = 2e-36 Identities = 298/435 (69%), Gaps = 0/435 (0%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||| | |||||| || || ||| ||||||||| ||| | | || |||| | | | Sbjct 1538 TACTTCGGCTTCAAGACCCTCGAGCGCTCGTACCTCTTCAGGGTCGACGGCAAGATCGTC 1597 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || |||| |||||||| ||| |||| | ||| || |||| || Sbjct 1598 GAGCGACCCCAGCACATGCTCATGCGCGTGGCCGTCGGCCTGCACAAGGACAACATCCCC 1657 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | | | || | | || | ||| ||||||||||| Sbjct 1658 GCCGTGATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACCCCGACG 1717 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || |||||| || ||| |||| || || |||||| | || | ||| Sbjct 1718 CTCTTCAACGCCGGAACCCCGCGCCCGCAGCTGTCGTCTTGCTTCCTGCTCACCATGAAG 1777 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| ||| || || | ||| | ||||||| | ||||| |||||| || | Sbjct 1778 GAGGACTCGATCGAGGGCATCTACGATACCCTCAAGCAGTGTGCCCTCATCTCCAAGTCG 1837 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || || ||| | | || ||| || ||||||||||| Sbjct 1838 GCCGGCGGCATCGGCCTCGCTGCGCACCGCATCCGCGCCTCCAACTCGTACATCCGCGGC 1897 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| |||||||||||||| ||| |||| |||||||| || | |||| || | || ||| Sbjct 1898 ACCAACGGCACCTCCAACGGTCTCATCCCCATGCTCCGCGTATACAACGACACTGCCCGC 1957 Query 94144 TACGTGGACCAGGGT 94158 ||||| ||||| ||| Sbjct 1958 TACGTCGACCAAGGT 1972 >seq65323 Length=85180 Score = 197 bits (218), Expect = 1e-45 Identities = 369/546 (68%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 94995 GGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGC 95054 ||||||| ||||| ||| | ||||| || || || | | ||| ||||||| | Sbjct 58347 GGGCATTCTTCAGCCGGACATGTGGGGCGTCGTCCCGTCCGCTATGTGGGACTGGGCCGG 58406 Query 95055 TCTACGCGCTGATGTTATCAAAC---ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCAT 95111 || || || | ||||| | |||| || | ||| | ||||| ||||| || || Sbjct 58407 GCTTCGTGCCAAC---ATCAAGCTCCACGGCGTCTACAACTCTCTGCTGGTGGCGCCGAT 58463 Query 95112 GCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTC 95171 |||||| || || || |||||||||| || ||| |||| |||||||||||| ||| Sbjct 58464 GCCCACCGCTTCAACATCGCAGATCCTCGGTAACTGCGAGGCGTTCGAACCCTACACGAA 58523 Query 95172 CAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT 95231 |||| | ||||| | ||||||| || || ||| || ||||| ||||||| | Sbjct 58524 CAACATCTACAAGCGCATCGTGCTCGGAGGCGACTTCATGGTGGTCAACCCGCACCTCGT 58583 Query 95232 ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC 95291 || ||||| | | || | ||| || ||| | |||||| | | | Sbjct 58584 GCGCGACCTCATGCAGAGAGGGCTCTGGTCCGAGAAGATGAAGAACGCCATCGTCGGGAA 58643 Query 95292 CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGAC 95351 |||||||||||| |||| |||| | || ||| | ||| ||||||| ||||||||||| Sbjct 58644 CAACGGCTCCGTGCAGAGCATCGACGAGATCCCGCAAGACCTCAAGGCCCTCTACAAGAC 58703 Query 95352 CGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411 ||||||||||||| |||||||||| || |||||| || |||| |||| | ||| ||| Sbjct 58704 CGTGTGGGAGATCTCGCAGCGCGTCATCATCGACCTGGCCGCCGACCGCTCGGCCTACAT 58763 Query 95412 CTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTC 95471 | |||||| |||||||| |||| | || | ||||| Sbjct 58764 CGACCAGAGCCAGTCGCTCAACCTCTACATGGCCGACCCCACCTTCCCCAAGCTCACGTC 58823 Query 95472 CATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACC-A 95530 |||| ||||||| ||| | ||||| ||||||||||| ||||| || | || ||| | Sbjct 58824 CATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTACCTCCGCACCAA 58883 Query 95531 GGCCAA 95536 |||||| Sbjct 58884 GGCCAA 58889 Score = 131 bits (144), Expect = 2e-25 Identities = 296/441 (67%), Gaps = 7/441 (2%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| ||| ||||| |||||||| ||||| |||||||| |||||| | || Sbjct 55722 TACTTTGGGTTCCGGACTCTCGAGAAGTCCTACCTGCTCAAGATCGATGGCGTCATCGCC 55781 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTC----ACGGCCACGACAT 93839 ||||| || || || || | |||||||| ||| | |||| || | | | || | Sbjct 55782 GAGCGCCCCCAGCACATGGTCATGCGCGTGGCCGT-GGGAGTCTACAAGGACGGCGGTCT 55840 Query 93840 GCCGAATGTTTTGCGGGCTTTCAGAGA-CATGCGGGACAAGAGGTATACCATGGCCACCC 93898 | | | || | || || | | ||| |||| | || || ||||||| Sbjct 55841 CCAGGAAGTGCTCCGAGCCTAC-GAGTTCATGTCTCAGCTTCTCTACACGCACGCCACCC 55899 Query 93899 CGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGA 93958 ||||||| |||||||| || || ||||| || |||||| || ||||| || | Sbjct 55900 CGACCCTCTTCAACGCTGGCACGCCGGTCCCCCAGATGAGCAGTTGCTTCCTCTTGGACA 55959 Query 93959 ACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAA 94018 |||| ||||||||| | | || | ||| | ||||||| || ||| |||||| | Sbjct 55960 TGAAGGAGGACTCCATCGACAGCATCTACGAGACCCTCAAGCGGTGCGCGCTCATCTCCA 56019 Query 94019 AATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCC 94078 | |||||| || ||||| | | ||| | | || || |||||||| | Sbjct 56020 AGAGCGCGGGAGGCATCGGCTTGGCCGCGCACAAGATCCGCGCAGCCAACTCCTACATTC 56079 Query 94079 GCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGG 94138 |||| ||||| || || ||||||||||||||||| ||||| || |||| |||| | | | Sbjct 56080 GCGGCACCAACGGGACTTCCAACGGCCTCGTCCCCATGCTGCGCGTCTACAACGATACTG 56139 Query 94139 CGCGCTACGTGGACCAGGGTG 94159 | |||||||| || || |||| Sbjct 56140 CCCGCTACGTAGATCAAGGTG 56160 Score = 93.3 bits (102), Expect = 4e-14 Identities = 122/168 (73%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 || ||||| | | | ||||| | |||||| |||| || ||||||||||| ||||| | Sbjct 56240 GGCGGTGGCAAGCGAAAGGGAGCCTTCGCGATCTACCTGGAGCCCTGGCATTCGGACATC 56299 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGAC 94272 | ||| |||| || ||||||||||||||| || ||||| | || | ||| Sbjct 56300 TTCGAGTTCCTCGATCTCAAAAAGAACCACGGCAAGGA---GGAGAACCGCGCTCGCGAC 56356 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 |||||||||| || ||| | || || || || ||||| ||||||||| Sbjct 56357 CTCTTCTACGGCCTGTGGATTCCCGATCTCTTCATGAAGCGCGTCGAG 56404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494307428438680