Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq39416 80.6 7e-11 >seq39416 Length=45366 Score = 80.6 bits (88), Expect = 7e-11 Identities = 111/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 || ||||| || ||||||||||||||||||||||||||| || | |||| | Sbjct 44184 GCCAAGGAGCTGAGCGTTCCGATCATCGCGCTGTCGCAGCTGTCGCGTCAGGTCGAAAGC 44243 Query 8938 CGCCCAAACAAGCGGCCCGTCA-TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGA 8996 ||| |||||| ||||| | | || || |||| || ||||| ||||||| ||||| Sbjct 44244 CGCGACGACAAGC-GCCCGCAACTCTCGGACTTGCGTGAATCGGGATCGATCGAACAGGA 44302 Query 8997 TGCCGACGTGATCCTCTTTATCTACCGCGATGA 9029 |||||||| | || || |||| ||||| || Sbjct 44303 CGCCGACGTCGTGCTGTTCGTCTATCGCGAGGA 44335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127443768629268