Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq58101 235 7e-57 seq49189 235 7e-57 seq38874 235 7e-57 seq65323 134 2e-26 seq47653 96.9 4e-15 >seq58101 Length=8023 Score = 235 bits (260), Expect = 7e-57 Identities = 879/1359 (65%), Gaps = 32/1359 (2%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 4356 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 4415 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| || | || ||||| ||| ||| | ||| || |||||| || Sbjct 4416 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 4475 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | | || |||||||| || || Sbjct 4476 GCCGAGCGATCAGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 4535 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || ||||| || || || ||||| ||| |||| || | ||||| | | Sbjct 4536 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGAACCGAGCCGTTGTGCGAG 4595 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | | ||| | || |||||||| || || || || || || ||| Sbjct 4596 ACGAGCTTGTTCTTGAGCGCCGGCGACCAGAGGCCGCGCTGCTGCAGCTCGCGCAGAAGG 4655 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 |||| ||||| || || || || |||||| |||| | ||||||||||||||| Sbjct 4656 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 4715 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 4716 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 4775 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 |||| ||| || |||||| ||||| | ||| | ||| | | ||||| Sbjct 4776 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 4835 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || | || | | | | | |||| | || |||||| | || |||||| Sbjct 4836 TCCCACCTGTCCGACGGCACGACTCCCCAGAGGTCGGGCTGGAGCTTGCCCATGGACGCG 4895 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 116154 ||||| |||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 4896 GGCGAGCCCTCATAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCA 4952 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCATTGCCTTGGCCTCGTC 116213 | ||||| ||||| || || ||||| || ||| | || || | | ||||||||| Sbjct 4953 ACCAGGGCGGCGTGGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTC 5011 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || ||| | | || | || || || || || ||||| || || || | ||| Sbjct 5012 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCC 5071 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCT 116330 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 5072 GATGGGCCTGTGGCGCATGTTCGAGTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGAT 5128 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 5129 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTG 5188 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||||| || || | | || || |||| || || |||| || ||||| || || Sbjct 5189 GTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 5242 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 5243 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 5302 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||||| | || || || || ||||| ||| || || |||||||| ||||| || Sbjct 5303 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 5362 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGC 116628 ||||| || ||||| | || |||| ||| || || ||| | || ||| || | Sbjct 5363 GGGCGTGCCAGTCTCGATCTGAGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGAC 5422 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC-TTC 116687 | |||| || || ||||||| |||||| ||| |||| ||||| || Sbjct 5423 CACGCGGCGC--GCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 5480 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||||| | || | || || || || | | || || ||||| ||||| | || || Sbjct 5481 CCCCAC-GAGTCAAACAGGCCGGGGGCTTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCC 5539 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCGAC 116806 | ||| || |||||||||||||| || || ||||| || |||| |||||||||| || Sbjct 5540 CATCTCCACGCGCTTCATGAAGAGATCGGGAATCCACAG-GCCGTAGAAGAGATCGCG-- 5596 Query 116807 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 5597 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 5656 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||| || || ||||| | |||| | |||||||| Sbjct 5657 GTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 5695 Score = 104 bits (114), Expect = 3e-17 Identities = 234/347 (67%), Gaps = 6/347 (2%) Strand=Plus/Plus Query 116936 CGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT-- 116993 |||| ||||||| ||||| || |||| ||| | || ||| || || || || || Sbjct 5832 CGTTGTATACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCGCGGATGT 5891 Query 116994 ACGAGACTTGTTGGCTCTGACATCGTG-GATGTGCATACCAATACCCCCTGCCCACTTTG 117052 ||||| ||| ||| | || ||| | | | | || || || || ||| |||| | Sbjct 5892 ACGAG--TTGGAGGCGCGGATGCGGTGCGCAGCG-AGGCCGATGCCGCCGGCCGACTTGG 5948 Query 117053 AGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 117112 |||| | || |||| | |||| | ||||||| || ||||||||||| |||| | | Sbjct 5949 AGATGAGGGCACACTGCTTGAGGGTATCGTAGATGCCCTCGATCGAGTCCTCCTTCATGG 6008 Query 117113 CGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172 || |||||||| ||||| || || | || || || ||||||||||| || || | Sbjct 6009 TGAGCAGGAAGCAAGACGACAGCTGCGGGCGCGGGGTTCCGGCGTTGAAGAGCGTCGGGG 6068 Query 117173 TCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGT 117232 | |||||| |||| | || |||| ||||||||||| | || | ||| |||| Sbjct 6069 TGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGGGGATGT 6128 Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279 ||| ||| | |||| | || ||||| | ||||| |||||| Sbjct 6129 TGTCCTTGTGCAGGCCGACGGCCACGCGCATGAGCATGTGCTGGGGT 6175 >seq49189 Length=7476 Score = 235 bits (260), Expect = 7e-57 Identities = 879/1359 (65%), Gaps = 32/1359 (2%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 5034 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 5093 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| || | || ||||| ||| ||| | ||| || |||||| || Sbjct 5094 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 5153 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | | || |||||||| || || Sbjct 5154 GCCGAGCGATCAGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 5213 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || ||||| || || || ||||| ||| |||| || | ||||| | | Sbjct 5214 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGAACCGAGCCGTTGTGCGAG 5273 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | | ||| | || |||||||| || || || || || || ||| Sbjct 5274 ACGAGCTTGTTCTTGAGCGCCGGCGACCAGAGGCCGCGCTGCTGCAGCTCGCGCAGAAGG 5333 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 |||| ||||| || || || || |||||| |||| | ||||||||||||||| Sbjct 5334 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 5393 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 5394 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 5453 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 |||| ||| || |||||| ||||| | ||| | ||| | | ||||| Sbjct 5454 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 5513 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || | || | | | | | |||| | || |||||| | || |||||| Sbjct 5514 TCCCACCTGTCCGACGGCACGACTCCCCAGAGGTCGGGCTGGAGCTTGCCCATGGACGCG 5573 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 116154 ||||| |||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 5574 GGCGAGCCCTCATAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCA 5630 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCATTGCCTTGGCCTCGTC 116213 | ||||| ||||| || || ||||| || ||| | || || | | ||||||||| Sbjct 5631 ACCAGGGCGGCGTGGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTC 5689 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || ||| | | || | || || || || || ||||| || || || | ||| Sbjct 5690 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCC 5749 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCT 116330 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 5750 GATGGGCCTGTGGCGCATGTTCGAGTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGAT 5806 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 5807 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTG 5866 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||||| || || | | || || |||| || || |||| || ||||| || || Sbjct 5867 GTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 5920 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 5921 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 5980 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||||| | || || || || ||||| ||| || || |||||||| ||||| || Sbjct 5981 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 6040 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGC 116628 ||||| || ||||| | || |||| ||| || || ||| | || ||| || | Sbjct 6041 GGGCGTGCCAGTCTCGATCTGAGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGAC 6100 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC-TTC 116687 | |||| || || ||||||| |||||| ||| |||| ||||| || Sbjct 6101 CACGCGGCGC--GCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 6158 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||||| | || | || || || || | | || || ||||| ||||| | || || Sbjct 6159 CCCCAC-GAGTCAAACAGGCCGGGGGCTTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCC 6217 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCGAC 116806 | ||| || |||||||||||||| || || ||||| || |||| |||||||||| || Sbjct 6218 CATCTCCACGCGCTTCATGAAGAGATCGGGAATCCACAG-GCCGTAGAAGAGATCGCG-- 6274 Query 116807 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 6275 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 6334 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||| || || ||||| | |||| | |||||||| Sbjct 6335 GTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 6373 Score = 104 bits (114), Expect = 3e-17 Identities = 234/347 (67%), Gaps = 6/347 (2%) Strand=Plus/Plus Query 116936 CGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT-- 116993 |||| ||||||| ||||| || |||| ||| | || ||| || || || || || Sbjct 6510 CGTTGTATACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCGCGGATGT 6569 Query 116994 ACGAGACTTGTTGGCTCTGACATCGTG-GATGTGCATACCAATACCCCCTGCCCACTTTG 117052 ||||| ||| ||| | || ||| | | | | || || || || ||| |||| | Sbjct 6570 ACGAG--TTGGAGGCGCGGATGCGGTGCGCAGCG-AGGCCGATGCCGCCGGCCGACTTGG 6626 Query 117053 AGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 117112 |||| | || |||| | |||| | ||||||| || ||||||||||| |||| | | Sbjct 6627 AGATGAGGGCACACTGCTTGAGGGTATCGTAGATGCCCTCGATCGAGTCCTCCTTCATGG 6686 Query 117113 CGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172 || |||||||| ||||| || || | || || || ||||||||||| || || | Sbjct 6687 TGAGCAGGAAGCAAGACGACAGCTGCGGGCGCGGGGTTCCGGCGTTGAAGAGCGTCGGGG 6746 Query 117173 TCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGT 117232 | |||||| |||| | || |||| ||||||||||| | || | ||| |||| Sbjct 6747 TGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGGGGATGT 6806 Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279 ||| ||| | |||| | || ||||| | ||||| |||||| Sbjct 6807 TGTCCTTGTGCAGGCCGACGGCCACGCGCATGAGCATGTGCTGGGGT 6853 >seq38874 Length=7777 Score = 235 bits (260), Expect = 7e-57 Identities = 879/1359 (65%), Gaps = 32/1359 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 3422 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 3363 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| || | || ||||| ||| ||| | ||| || |||||| || Sbjct 3362 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 3303 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | | || |||||||| || || Sbjct 3302 GCCGAGCGATCAGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 3243 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || ||||| || || || ||||| ||| |||| || | ||||| | | Sbjct 3242 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGAACCGAGCCGTTGTGCGAG 3183 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | | ||| | || |||||||| || || || || || || ||| Sbjct 3182 ACGAGCTTGTTCTTGAGCGCCGGCGACCAGAGGCCGCGCTGCTGCAGCTCGCGCAGAAGG 3123 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 |||| ||||| || || || || |||||| |||| | ||||||||||||||| Sbjct 3122 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 3063 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 3062 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 3003 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 |||| ||| || |||||| ||||| | ||| | ||| | | ||||| Sbjct 3002 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 2943 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || | || | | | | | |||| | || |||||| | || |||||| Sbjct 2942 TCCCACCTGTCCGACGGCACGACTCCCCAGAGGTCGGGCTGGAGCTTGCCCATGGACGCG 2883 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 116154 ||||| |||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 2882 GGCGAGCCCTCATAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCA 2826 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCATTGCCTTGGCCTCGTC 116213 | ||||| ||||| || || ||||| || ||| | || || | | ||||||||| Sbjct 2825 ACCAGGGCGGCGTGGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTC 2767 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || ||| | | || | || || || || || ||||| || || || | ||| Sbjct 2766 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCC 2707 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCT 116330 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 2706 GATGGGCCTGTGGCGCATGTTCGAGTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGAT 2650 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 2649 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTG 2590 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||||| || || | | || || |||| || || |||| || ||||| || || Sbjct 2589 GTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 2536 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 2535 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 2476 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||||| | || || || || ||||| ||| || || |||||||| ||||| || Sbjct 2475 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 2416 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGC 116628 ||||| || ||||| | || |||| ||| || || ||| | || ||| || | Sbjct 2415 GGGCGTGCCAGTCTCGATCTGAGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGAC 2356 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC-TTC 116687 | |||| || || ||||||| |||||| ||| |||| ||||| || Sbjct 2355 CACGCGGCGC--GCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 2298 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||||| | || | || || || || | | || || ||||| ||||| | || || Sbjct 2297 CCCCAC-GAGTCAAACAGGCCGGGGGCTTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCC 2239 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCGAC 116806 | ||| || |||||||||||||| || || ||||| || |||| |||||||||| || Sbjct 2238 CATCTCCACGCGCTTCATGAAGAGATCGGGAATCCACAG-GCCGTAGAAGAGATCGCG-- 2182 Query 116807 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 2181 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 2122 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||| || || ||||| | |||| | |||||||| Sbjct 2121 GTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 2083 Score = 104 bits (114), Expect = 3e-17 Identities = 234/347 (67%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 116936 CGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT-- 116993 |||| ||||||| ||||| || |||| ||| | || ||| || || || || || Sbjct 1946 CGTTGTATACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCGCGGATGT 1887 Query 116994 ACGAGACTTGTTGGCTCTGACATCGTG-GATGTGCATACCAATACCCCCTGCCCACTTTG 117052 ||||| ||| ||| | || ||| | | | | || || || || ||| |||| | Sbjct 1886 ACGAG--TTGGAGGCGCGGATGCGGTGCGCAGCG-AGGCCGATGCCGCCGGCCGACTTGG 1830 Query 117053 AGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 117112 |||| | || |||| | |||| | ||||||| || ||||||||||| |||| | | Sbjct 1829 AGATGAGGGCACACTGCTTGAGGGTATCGTAGATGCCCTCGATCGAGTCCTCCTTCATGG 1770 Query 117113 CGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172 || |||||||| ||||| || || | || || || ||||||||||| || || | Sbjct 1769 TGAGCAGGAAGCAAGACGACAGCTGCGGGCGCGGGGTTCCGGCGTTGAAGAGCGTCGGGG 1710 Query 117173 TCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGT 117232 | |||||| |||| | || |||| ||||||||||| | || | ||| |||| Sbjct 1709 TGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGGGGATGT 1650 Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279 ||| ||| | |||| | || ||||| | ||||| |||||| Sbjct 1649 TGTCCTTGTGCAGGCCGACGGCCACGCGCATGAGCATGTGCTGGGGT 1603 >seq65323 Length=85180 Score = 134 bits (148), Expect = 2e-26 Identities = 178/245 (73%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||||||| ||| || |||||||| ||| |||||| || || |||||| || || Sbjct 60525 GCAAACTCTGCGTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGCGAGGCCG 60584 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| || ||||| | |||||| || | ||| || ||||| ||||||||||| Sbjct 60585 GGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAGAAGATG 60644 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAG-CGGGA--CTTTGTATCA 127696 ||||| || ||||| | | || ||||||||||||| | || || || | | Sbjct 60645 CCCTCGACGGCGGCGAATCCGACGAGGCGCTCGGCAAAGGTGTCGAGACCCTCCTTGTTG 60704 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | |||| ||| ||||||| ||||| |||| | | || || |||| ||| || | | Sbjct 60705 ATCCACCGCATGGCCCACTCGGCCTTCTTCTTCACCGAGGGCACCGTCTCGATGGCGTTA 60764 Query 127757 AAGAG 127761 ||||| Sbjct 60765 AAGAG 60769 Score = 96.9 bits (106), Expect = 4e-15 Identities = 243/361 (67%), Gaps = 10/361 (3%) Strand=Plus/Minus Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607 || || ||||| |||||||| || ||||| |||||||| ||| |||| ||| || || Sbjct 56607 CAAGCGTCCTTATAGAGCATGTAGGGCGTGCCCGTCTCGACTTGTGACTCGAGGATCGCG 56548 Query 116608 TTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 116667 ||| | || ||| | |||| | ||| || || ||| |||||| | | Sbjct 56547 AACCACAGCTCCTGGGCCTTGATAGTGCGGCGGGCGCGGCCTTCCCGCTCGTAGCGGGCG 56488 Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCT--CTGAGAGCCCTGGTGCCTTATCTGGAC 116725 ||||| |||| |||| || ||| ||| | |||| || || || || | | ||| Sbjct 56487 TAGAGTTCCTCGAACTTGTCTCCC-CAGACGTCCTGA-AGACCCGGCGCTTCGTTGGGAT 56430 Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785 ||| || ||||| | ||||| |||| || |||||||||||||| || || ||||| | Sbjct 56429 CGAACAGCGACCAGTAGCCACCAGCCTCGACGCGCTTCATGAAGAGATCGGGAATCCACA 56370 Query 116786 GCGCCG-AGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACT 116842 | |||| ||||||| || || |||| | |||| || | || || || | | Sbjct 56369 G-GCCGTAGAAGAGGTCGCG--AGCGCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGAT 56313 Query 116843 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGC 116902 | | || || | ||| |||| ||||| || |||||||| | ||||| | ||||| | Sbjct 56312 CGAGGAACTCGAAGATGTCCGAATGCCAGGGCTCCAGGTAGATCGCGAAGGCTCCCTTTC 56253 Query 116903 G 116903 | Sbjct 56252 G 56252 >seq47653 Length=11216 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 ||| ||||| || |||||| || || |||||| ||| || |||||||| || ||||| Sbjct 8258 ACCTTCGTCGCGACTGATGAGCTCGTTGGAGAAGGCCAGGCCGGGCATGAGGCCGCGCTT 8317 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 ||| | |||||| || | || || || || ||||||||||| ||||| || ||||| Sbjct 8318 CTTGAGCCAGAAGATGGAGCAGAACGACCCGGAGAAGAAGATGCCCTCAACGGCGGCGAA 8377 Query 127657 CGCAAATAGACGCTCGGCAAAGG--AGCGGGACTT-TGTATCAAACCACTTCATCGCCCA 127713 | | || |||| | |||||| | ||| || | | |||||| | ||||| Sbjct 8378 TCCGACCAGGCGCTGGCCAAAGGTCTCTACGCCTTCGGTGGCGATCCACTTGAGAGCCCA 8437 Query 127714 CTGTGCCTTTTTCTCGATACATGGGACGGTCTGG 127747 | ||||| |||| |||| | |||| ||||||| Sbjct 8438 GTCGGCCTTCTTCTTGATAGACGGGATGGTCTGG 8471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612991600880280