Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq34497 104 8e-18 >seq34497 Length=166879 Score = 104 bits (114), Expect = 8e-18 Identities = 136/185 (74%), Gaps = 10/185 (5%) Strand=Plus/Plus Query 24822 GGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTC 24881 || |||||| |||||||||||||||||| ||||| || |||||||||||||||||| Sbjct 40262 GGCAAGCTGTCCTGCCAGCTCTACCAGCGTTCAGCGGATGTCTTCCTCGGCGTGCCGTTC 40321 Query 24882 AATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCT---CGGACTGAAG 24938 || |||||| ||| ||||||||||| | | | || ||| | ||| |||||| Sbjct 40322 AACATCGCGTCCTATGCGCTGCTGAC---AATGATGGTGGCGCAGGTCACCGGCCTGAAG 40378 Query 24939 GTCGGCGAATTCATCTGGACCGGC--GGCGACGTCCACCTGTATTCGAACCACGTCGAGC 24996 |||||| ||| || | || ||||| | || || ||||| |||||| |||| | Sbjct 40379 CCCGGCGATTTC--GTGCATTCGCTTGGCGATGCGCATCTTTATTCAAACCACCTCGACC 40436 Query 24997 AGGCG 25001 ||||| Sbjct 40437 AGGCG 40441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164041725770384