Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq38361 100 4e-16 >seq38361 Length=167166 Score = 100 bits (110), Expect = 4e-16 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 147391 TCGACCGCCTTCTGGGCCAGCGACGCGGCGGTGAAGATGAAGCGCTTATCGCCCTTCAGG 147450 ||||||||||| ||||||| | || || || ||||| ||||||||| || || Sbjct 2651 TCGACCGCCTTTTGGGCCAATGCAGCTGCAGTAAAGATCGCGCGCTTATCTGATTTGAGC 2710 Query 147451 ACCTTCAGCCAGGAGGCGACGTAGGAGGCGTGGTCT--TCGCGGACTTCCGGGGTCAGGC 147508 || ||||||| | | | ||||| ||||||||| |||||| || | || | | Sbjct 2711 ACAGCCAGCCAGTTGCCAAGGTAGGCGGCGTGGTCGGGTCGCGGC--TCGAGCGTGATGG 2768 Query 147509 CGAGGATGGCGCAGAGGAAGGCCGAGCCCAGTTCGGCGACCAGTTCCTCGGCGGCGTAGG 147568 ||| ||| |||||||| || | || | ||| || |||||||||||| || |||| Sbjct 2769 AGAGATCGGCACAGAGGAACGCGGCACCGATTTCTGCAACCAGTTCCTCGCGCGCATAGG 2828 Query 147569 CCTCGTCACCGAAGCGCTTGCCGAACTCGCGGT 147601 | | ||| || ||||||||||| | ||||||| Sbjct 2829 CGTGGTCGCCAAAGCGCTTGCCAAGATCGCGGT 2861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 699856137434520