Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq57661 206 5e-48 seq42187 206 5e-48 seq37095 206 5e-48 seq58101 174 3e-38 seq49189 174 3e-38 seq38874 174 3e-38 seq65323 165 2e-35 seq47653 132 9e-26 >seq57661 Length=1717 Score = 206 bits (228), Expect = 5e-48 Identities = 396/579 (68%), Gaps = 20/579 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| |||||||| | |||||| Sbjct 1695 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAAGAAGTCGATCTG 1636 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | |||||| | |||| | | || ||| |||||| ||| || ||||| || Sbjct 1635 AGCTCCGACATGAAGCACTGGGAATCGCTCAGCAACGACGAGAGGCACTTCATCAAGCAC 1576 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || |||| ||||| || ||| || || || ||| |||||| || || | ||| Sbjct 1575 GTCCTGGCCTTCTTCGCGGCCAGCGACGGCATCGTGGCCGAGAACCTCGCCGGCCGCTTC 1516 Query 25657 ACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 | | ||| || ||| ||| ||||| || |||||||| ||||| || |||||| Sbjct 1515 ATGATGGAGGTCCAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAAATCGCCATC 1459 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| |||| | ||| || || || ||| | | ||| | Sbjct 1458 GAGAACATCCACTCCGAGATGTACTC---GCTCCTCATCGACACCTACGTCAAGGACCAC 1402 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | ||||| || || || || | ||||||||| | | ||| |||||| ||| || Sbjct 1401 GTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAAGCC 1342 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT------ACGTTTGGCGAGCGGCTG 25884 |||||||||||||||||||||| || ||| | || || | |||||| || Sbjct 1341 GACTGGGCCATGAAGTGGATCAACAAGGAGGGCGGTGCCGAGACCTTCGCCGAGCGCCTC 1282 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTG 25943 | | || || || || ||||||||||| ||| ||| || ||| ||||||| || Sbjct 1281 ATCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCT-CCATCTTTTG 1223 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||||| || || |||||||| || ||| |||||| | |||||| | || Sbjct 1222 GCTCAAGAAGCGCGGCCTGATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGA 1163 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACAC 26042 |||||| |||||| | || ||||||||||| |||||||| Sbjct 1162 CGAGGGCCTCCACTGCGACTTTGCCTGCCTCCTCTACAC 1124 >seq42187 Length=1775 Score = 206 bits (228), Expect = 5e-48 Identities = 396/579 (68%), Gaps = 20/579 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| |||||||| | |||||| Sbjct 23 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAAGAAGTCGATCTG 82 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | |||||| | |||| | | || ||| |||||| ||| || ||||| || Sbjct 83 AGCTCCGACATGAAGCACTGGGAATCGCTCAGCAACGACGAGAGGCACTTCATCAAGCAC 142 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || |||| ||||| || ||| || || || ||| |||||| || || | ||| Sbjct 143 GTCCTGGCCTTCTTCGCGGCCAGCGACGGCATCGTGGCCGAGAACCTCGCCGGCCGCTTC 202 Query 25657 ACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 | | ||| || ||| ||| ||||| || |||||||| ||||| || |||||| Sbjct 203 ATGATGGAGGTCCAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAAATCGCCATC 259 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| |||| | ||| || || || ||| | | ||| | Sbjct 260 GAGAACATCCACTCCGAGATGTACTC---GCTCCTCATCGACACCTACGTCAAGGACCAC 316 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | ||||| || || || || | ||||||||| | | ||| |||||| ||| || Sbjct 317 GTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAAGCC 376 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT------ACGTTTGGCGAGCGGCTG 25884 |||||||||||||||||||||| || ||| | || || | |||||| || Sbjct 377 GACTGGGCCATGAAGTGGATCAACAAGGAGGGCGGTGCCGAGACCTTCGCCGAGCGCCTC 436 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTG 25943 | | || || || || ||||||||||| ||| ||| || ||| ||||||| || Sbjct 437 ATCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCT-CCATCTTTTG 495 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||||| || || |||||||| || ||| |||||| | |||||| | || Sbjct 496 GCTCAAGAAGCGCGGCCTGATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGA 555 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACAC 26042 |||||| |||||| | || ||||||||||| |||||||| Sbjct 556 CGAGGGCCTCCACTGCGACTTTGCCTGCCTCCTCTACAC 594 >seq37095 Length=1954 Score = 206 bits (228), Expect = 5e-48 Identities = 396/579 (68%), Gaps = 20/579 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| |||||||| | |||||| Sbjct 1128 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAAGAAGTCGATCTG 1187 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | |||||| | |||| | | || ||| |||||| ||| || ||||| || Sbjct 1188 AGCTCCGACATGAAGCACTGGGAATCGCTCAGCAACGACGAGAGGCACTTCATCAAGCAC 1247 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || |||| ||||| || ||| || || || ||| |||||| || || | ||| Sbjct 1248 GTCCTGGCCTTCTTCGCGGCCAGCGACGGCATCGTGGCCGAGAACCTCGCCGGCCGCTTC 1307 Query 25657 ACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 | | ||| || ||| ||| ||||| || |||||||| ||||| || |||||| Sbjct 1308 ATGATGGAGGTCCAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAAATCGCCATC 1364 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| |||| | ||| || || || ||| | | ||| | Sbjct 1365 GAGAACATCCACTCCGAGATGTACTC---GCTCCTCATCGACACCTACGTCAAGGACCAC 1421 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | ||||| || || || || | ||||||||| | | ||| |||||| ||| || Sbjct 1422 GTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAAGCC 1481 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT------ACGTTTGGCGAGCGGCTG 25884 |||||||||||||||||||||| || ||| | || || | |||||| || Sbjct 1482 GACTGGGCCATGAAGTGGATCAACAAGGAGGGCGGTGCCGAGACCTTCGCCGAGCGCCTC 1541 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTG 25943 | | || || || || ||||||||||| ||| ||| || ||| ||||||| || Sbjct 1542 ATCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCT-CCATCTTTTG 1600 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||||| || || |||||||| || ||| |||||| | |||||| | || Sbjct 1601 GCTCAAGAAGCGCGGCCTGATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGA 1660 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACAC 26042 |||||| |||||| | || ||||||||||| |||||||| Sbjct 1661 CGAGGGCCTCCACTGCGACTTTGCCTGCCTCCTCTACAC 1699 >seq58101 Length=8023 Score = 174 bits (192), Expect = 3e-38 Identities = 314/452 (69%), Gaps = 24/452 (5%) Strand=Plus/Plus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG-CCTCGGGAG 221477 |||||| ||||||||||||||||| ||||| |||||| ||| || ||||| Sbjct 4955 CAGGGCGGCGTGGTAGATGGTCTCGAAGATGGCGCGGTTGAG-CTCGCGGGCCTCGTCGC 5013 Query 221478 AAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 | || ||||| ||| |||||||||||||| ||||| ||||| || |||| Sbjct 5014 TCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCCGA 5073 Query 221538 TGGGCCTGTGTCTCCTGTTGGA--AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595 |||||||||| | | |||| || |||| || || |||||||| || |||||| ||| Sbjct 5074 TGGGCCTGTGGCGCATGTTCGAGTTGCGG--GCCTCGGGCACGGGGTAGTAGTTGATGTC 5131 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 ||||| |||||||||||| |||| || || || || ||| |||||||| ||| | Sbjct 5132 GATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTGGT- 5190 Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715 | ||||||||| | ||| | || | |||| | || | ||| Sbjct 5191 -----CAAACTCGCCG--TTGGTGATGAACTTGGGC---AGCG---CGAGCGA----GGC 5233 Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775 |||||| ||||||||||||||||| || ||||| | || ||| || || ||||| Sbjct 5234 CAGGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTT 5293 Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835 ||| |||||| || ||||| | || || ||||||| ||| ||||||||||| Sbjct 5294 CGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTA 5353 Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAG 221867 ||||| |||| ||||||||| | ||||| Sbjct 5354 CAGCATGTAGGGCGTGCCAGTCTCGATCTGAG 5385 Score = 105 bits (116), Expect = 1e-17 Identities = 233/342 (68%), Gaps = 8/342 (2%) Strand=Plus/Plus Query 222302 GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 |||| | |||||| || ||||| || ||||| | ||| || |||||| || || Sbjct 5918 GCAGCGAGGCCGATGCCGCCGGCCGACTTGGAGATGAGGGCACACTGCTTGAGGGTATCG 5977 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||||||| || ||||||||||| | | | ||||| || |||||||||| ||| | Sbjct 5978 TAGATGCCCTCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCAAGACGACAGCTGCGGG 6037 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACAT 222480 | || | |||||| || ||||| || ||||||| || ||| ||| || |||| Sbjct 6038 CGCGGGGTTCCGGCGTTGAAGAGCGTCGGGGTGGCGTGGGTGAAG-AGCTGCTGCGACAA 6096 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCT 222540 || ||||| ||||| | || || |||||||||| ||| | | ||| | Sbjct 6097 GAGGTCGTAGGTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGGCCGACGGCCACGCG 6156 Query 222541 CATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGA 222597 |||| ||||| |||||| | ||| || | | || | || | || || |||||||| Sbjct 6157 CATGAGCATGTGCTGGGGTCGCTCGAC-GATCTTGCCGTCGACCCTGA-AG-AGGTACGA 6213 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 || || |||||||| || |||||| || || ||||| Sbjct 6214 GCGCTCGAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTC 6255 >seq49189 Length=7476 Score = 174 bits (192), Expect = 3e-38 Identities = 314/452 (69%), Gaps = 24/452 (5%) Strand=Plus/Plus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG-CCTCGGGAG 221477 |||||| ||||||||||||||||| ||||| |||||| ||| || ||||| Sbjct 5633 CAGGGCGGCGTGGTAGATGGTCTCGAAGATGGCGCGGTTGAG-CTCGCGGGCCTCGTCGC 5691 Query 221478 AAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 | || ||||| ||| |||||||||||||| ||||| ||||| || |||| Sbjct 5692 TCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCCGA 5751 Query 221538 TGGGCCTGTGTCTCCTGTTGGA--AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595 |||||||||| | | |||| || |||| || || |||||||| || |||||| ||| Sbjct 5752 TGGGCCTGTGGCGCATGTTCGAGTTGCGG--GCCTCGGGCACGGGGTAGTAGTTGATGTC 5809 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 ||||| |||||||||||| |||| || || || || ||| |||||||| ||| | Sbjct 5810 GATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTGGT- 5868 Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715 | ||||||||| | ||| | || | |||| | || | ||| Sbjct 5869 -----CAAACTCGCCG--TTGGTGATGAACTTGGGC---AGCG---CGAGCGA----GGC 5911 Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775 |||||| ||||||||||||||||| || ||||| | || ||| || || ||||| Sbjct 5912 CAGGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTT 5971 Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835 ||| |||||| || ||||| | || || ||||||| ||| ||||||||||| Sbjct 5972 CGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTA 6031 Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAG 221867 ||||| |||| ||||||||| | ||||| Sbjct 6032 CAGCATGTAGGGCGTGCCAGTCTCGATCTGAG 6063 Score = 105 bits (116), Expect = 1e-17 Identities = 233/342 (68%), Gaps = 8/342 (2%) Strand=Plus/Plus Query 222302 GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 |||| | |||||| || ||||| || ||||| | ||| || |||||| || || Sbjct 6596 GCAGCGAGGCCGATGCCGCCGGCCGACTTGGAGATGAGGGCACACTGCTTGAGGGTATCG 6655 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||||||| || ||||||||||| | | | ||||| || |||||||||| ||| | Sbjct 6656 TAGATGCCCTCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCAAGACGACAGCTGCGGG 6715 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACAT 222480 | || | |||||| || ||||| || ||||||| || ||| ||| || |||| Sbjct 6716 CGCGGGGTTCCGGCGTTGAAGAGCGTCGGGGTGGCGTGGGTGAAG-AGCTGCTGCGACAA 6774 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCT 222540 || ||||| ||||| | || || |||||||||| ||| | | ||| | Sbjct 6775 GAGGTCGTAGGTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGGCCGACGGCCACGCG 6834 Query 222541 CATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGA 222597 |||| ||||| |||||| | ||| || | | || | || | || || |||||||| Sbjct 6835 CATGAGCATGTGCTGGGGTCGCTCGAC-GATCTTGCCGTCGACCCTGA-AG-AGGTACGA 6891 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 || || |||||||| || |||||| || || ||||| Sbjct 6892 GCGCTCGAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTC 6933 >seq38874 Length=7777 Score = 174 bits (192), Expect = 3e-38 Identities = 314/452 (69%), Gaps = 24/452 (5%) Strand=Plus/Minus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG-CCTCGGGAG 221477 |||||| ||||||||||||||||| ||||| |||||| ||| || ||||| Sbjct 2823 CAGGGCGGCGTGGTAGATGGTCTCGAAGATGGCGCGGTTGAG-CTCGCGGGCCTCGTCGC 2765 Query 221478 AAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 | || ||||| ||| |||||||||||||| ||||| ||||| || |||| Sbjct 2764 TCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCCGA 2705 Query 221538 TGGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595 |||||||||| | | |||| || |||| || || |||||||| || |||||| ||| Sbjct 2704 TGGGCCTGTGGCGCATGTTCGAGTTGCGG--GCCTCGGGCACGGGGTAGTAGTTGATGTC 2647 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 ||||| |||||||||||| |||| || || || || ||| |||||||| ||| | Sbjct 2646 GATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTGGT- 2588 Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715 | ||||||||| | ||| | || | |||| | || | ||| Sbjct 2587 -----CAAACTCGCCG--TTGGTGATGAACTTGGGC---AGCG---CGAGCGA----GGC 2545 Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775 |||||| ||||||||||||||||| || ||||| | || ||| || || ||||| Sbjct 2544 CAGGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTT 2485 Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835 ||| |||||| || ||||| | || || ||||||| ||| ||||||||||| Sbjct 2484 CGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTA 2425 Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAG 221867 ||||| |||| ||||||||| | ||||| Sbjct 2424 CAGCATGTAGGGCGTGCCAGTCTCGATCTGAG 2393 Score = 105 bits (116), Expect = 1e-17 Identities = 233/342 (68%), Gaps = 8/342 (2%) Strand=Plus/Minus Query 222302 GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 |||| | |||||| || ||||| || ||||| | ||| || |||||| || || Sbjct 1860 GCAGCGAGGCCGATGCCGCCGGCCGACTTGGAGATGAGGGCACACTGCTTGAGGGTATCG 1801 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||||||| || ||||||||||| | | | ||||| || |||||||||| ||| | Sbjct 1800 TAGATGCCCTCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCAAGACGACAGCTGCGGG 1741 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACAT 222480 | || | |||||| || ||||| || ||||||| || ||| ||| || |||| Sbjct 1740 CGCGGGGTTCCGGCGTTGAAGAGCGTCGGGGTGGCGTGGGTGAAG-AGCTGCTGCGACAA 1682 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCT 222540 || ||||| ||||| | || || |||||||||| ||| | | ||| | Sbjct 1681 GAGGTCGTAGGTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGGCCGACGGCCACGCG 1622 Query 222541 CATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGA 222597 |||| ||||| |||||| | ||| || | | || | || | || || |||||||| Sbjct 1621 CATGAGCATGTGCTGGGGTCGCTCGAC-GATCTTGCCGTCGACCCTGA-AG-AGGTACGA 1565 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 || || |||||||| || |||||| || || ||||| Sbjct 1564 GCGCTCGAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTC 1523 >seq65323 Length=85180 Score = 165 bits (182), Expect = 2e-35 Identities = 344/509 (68%), Gaps = 18/509 (4%) Strand=Plus/Minus Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGC 25875 |||| |||||| |||||||||| ||||||||||| || | || || |||| | Sbjct 60736 AAGAAGAAGGCCGAGTGGGCCATGCGGTGGATCAACAAGGAGGGTCTCGACACCTTTGCC 60677 Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 ||||| || || | || || || || ||||||||||| ||| || || || || Sbjct 60676 GAGCGCCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGTTCC 60617 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCAT 25994 ||||||||||||||| | | | || | ||||||||| || ||| |||||||||||||| Sbjct 60616 ATCTTCTGGCTCAAGAA-ACGCGGTCTCATGCCCGGCCTCGCCTTCTCCAACGAGCTCAT 60558 Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCT 26054 |||| | |||||||| || ||| ||| ||||||||||| || |||| | || | | Sbjct 60557 CAGCCGCGACGAGGGCCTGCACGCAGAGTTTGCCTGCCTCCTGTACA--GTATGCTCG-T 60501 Query 26055 CCACAAACCTTCTCAAGAGACCGTCTACAG--TATCATCAAAGAGGCTGTGGAGATCGAG 26112 |||| || || || ||| | | || ||| || ||||| || ||||||||| Sbjct 60500 GAACAAGCC--GTCGAGCGACGTGCCAAAGCAGATCGTCCTCGAGGCCGTCGAGATCGAG 60443 Query 26113 AAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATG 26172 ||||||||| | ||||||||| | |||||| Sbjct 60442 AAGGAGTTTGTCACGGAGTCGCTCCCGGTGGCGCTCATCGGCATGAACGCGGGCCTCATG 60383 Query 26173 AGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACT 26231 |||| ||||| |||| ||| ||||||| |||||| ||| || || || || || || Sbjct 60382 TGCCAGTACATCGAGTTTGTCGCCGACCGTCTGCTCGTGGCA-CTCGGGTGCGACAAACA 60324 Query 26232 CTACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACC 26289 ||||| |||| | ||||| ||| || ||||| || || | || || |||||| Sbjct 60323 CTACA--ACGCCACGAACCCCTTCCCCTGGATGGAGCTGATCTCACTCGAGGGCAAGACC 60266 Query 26290 AACTTCTTTGAAAAGAGGGTCGGCGACTA 26318 |||||||| || | |||||||| || Sbjct 60265 AACTTCTTCGAGCGCCGAGTCGGCGAGTA 60237 Score = 104 bits (114), Expect = 4e-17 Identities = 178/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||||||||| ||| | ||||| Sbjct 61155 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTCGATCTC 61096 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | |||||| | |||| | |||| | ||||| | ||| || ||||| || Sbjct 61095 GGTGATGACATGAAGCACTGGCAATCTCTCACGGCCGACGAACGGCACTTCATCAAGCAC 61036 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG-AGATT 25655 || ||||||||||||| || || || || ||| ||||| ||| ||| | | || Sbjct 61035 GTTCTGGCATTCTTTGCCGCTAGCGACGGCATCGTGGCAGAGAACCTG-GCGGGTCGCTT 60977 Query 25656 CACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 || | || |||| ||| | || || | |||||||||||| ||||| || ||||||| Sbjct 60976 CATGAAAGAGGTGCAAGTGC-CCGAAGCGAGGTGTTTCTACGGCTTCCAAATCGCCATCG 60918 Query 25715 AAAATGTGCACTC 25727 | || | ||||| Sbjct 60917 AGAACATTCACTC 60905 >seq47653 Length=11216 Score = 132 bits (146), Expect = 9e-26 Identities = 233/335 (70%), Gaps = 11/335 (3%) Strand=Plus/Minus Query 25683 CAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAA 25742 ||| || ||||| || |||||||| ||||||||||| | ||| || |||| | Sbjct 8588 CAACTGCTTCTATGGCTTCCAGATCGCCATCGAAAACATCCACAGCTAGATGTACTC--- 8532 Query 25743 GCTTCTGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCAT 25799 ||| || || || ||| | | ||| |||||||| | | ||||| ||| Sbjct 8531 GCTGCTCATCGACACCTACGTCAAGGACACCGCCGAGAAGGCCCACCTGTTCAACGCCGC 8472 Query 25800 CGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA 25859 | || ||| || ||||||| |||||| ||||| | ||||||||| || | | Sbjct 8471 CCAGACCATCCCGTCTATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATCGCCACCGA 8412 Query 25860 GAGCGCT---ACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTT 25916 ||| || |||||| |||| ||||| | || || || || ||||||||||| || Sbjct 8411 AGGCGTAGAGACCTTTGGCCAGCGCCTGGTCGGATTCGCCGCCGTTGAGGGCATCTTCTT 8352 Query 25917 CAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGT 25975 | ||| ||||| ||| ||||||||||||||||| || || ||||||||| ||| Sbjct 8351 CTCCGGGTCGTTCTGCT-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGG 8293 Query 25976 ACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 ||| ||||||||||||||||| | ||||| ||| Sbjct 8292 CCTTCTCCAACGAGCTCATCAGTCGCGACGAAGGT 8258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928064187219520