Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq34751 82.4 2e-11 >seq34751 Length=102729 Score = 82.4 bits (90), Expect = 2e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 3882 TAGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGAG 3941 |||| |||||||||| |||||||||| ||||||||||| ||| || ||||||||||| Sbjct 45086 TAGGAGCGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAG 45027 Query 3942 TCCTGCCGCGTCTGC 3956 |||||||| |||| Sbjct 45026 CCCTGCCGCTCCTGC 45012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146775521981984