Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_022085.1 Length=76483 Score E Sequences producing significant alignments: (Bits) Value seq64713 329 2e-85 >seq64713 Length=190342 Score = 329 bits (364), Expect = 2e-85 Identities = 535/762 (70%), Gaps = 11/762 (1%) Strand=Plus/Minus Query 66151 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 66210 ||| || | ||||| ||| ||||| ||| ||||| |||| || |||| ||| Sbjct 164043 ATTTCCTCGGGCTCGCTCGGGCTGGATATCGCGCTGGGTGTCGGCGGCCTGCCGAAGGGG 163984 Query 66211 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 66270 |||||||| || || ||||| || ||||| || || ||| | || ||| || ||| || Sbjct 163983 CGGGTGGTCGAGATTTACGGTCCGGAATCCTCCGGCAAGACCACGCTGGCGCTGCACACG 163924 Query 66271 GTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTG 66330 |||||| | || |||||| || |||| ||||| |||||||||||| ||| | || Sbjct 163923 GTGGCCGAGGCCCAGAAGAAAGGCGGCATTTGCGCCTTCATCGACGCTGAACACGCGCTC 163864 Query 66331 GACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCG 66390 || || | || ||| |||||| || | |||| | || || | |||||| Sbjct 163863 GATCCCGTCTATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTTCTGATCTCGCAGCCG 163804 Query 66391 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 66450 || |||||| ||||| ||||| |||| ||| || || || |||| | ||| Sbjct 163803 GATCATGGCGAACAGGCGCTGGAAATCGCCGACACGCTGGTGCGCTCCGGCGCG--GTCG 163746 Query 66451 ATCGTC--GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACA 66508 || | || || ||||| |||||||| ||||||||||||||||| ||||||||||| | Sbjct 163745 ATGTGCTGGTTGTGGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAACTCGAAGGCGAGA 163686 Query 66509 TCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCA 66568 | || ||||| | ||||||||| || || || ||| ||||| |||||||||||| Sbjct 163685 TGGGCGACAGCCTTCCCGGCCTGCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTCA 163626 Query 66569 CCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGA 66628 ||| | | ||| || || |||| || | ||| |||||||| | ||| ||||| Sbjct 163625 CCGCCTCGATCAACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGA 163566 Query 66629 TCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCT 66688 |||| ||| |||||| || || |||||||| ||||| || ||||||| ||||| Sbjct 163565 TCGGT---GTGATGTACGGCTCGCCGGAAACCACCACTGGCGGTAACGCTTTGAAGTTCT 163509 Query 66689 ACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAG-AAGGAAGGCGATGAGGCT 66747 |||| || || ||| | || | || ||||||| | | || |||||| |||| || | Sbjct 163508 ACGCGTCCGTGCGCCTCGACATTCGCCGCATCGGC-CAGATCAAGGAACGCGACGAAGTG 163450 Query 66748 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAAC 66807 |||||||| ||||| || ||||| || |||||||||||||| || ||| | | Sbjct 163449 ATCGGCAACTCGACCCGCGTCAAGGTGGTGAAGAACAAGCTGGCGCCTCCGTTCAAGCAG 163390 Query 66808 GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTG 66867 | ||||||| | || ||||||| |||||| ||||| || |||| | ||||| || Sbjct 163389 GTCGAGTTCGACATCATGTACGGCGAGGGCGTCTCGAAGCTGGGCGAAATTCTCGATCTC 163330 Query 66868 GCCGTG-TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 66908 | |||| ||| || | || ||||||| ||||| ||||| Sbjct 163329 GGCGTGAAAGCA-GGAATCGTCGAGAAGTCCGGCGCATGGTT 163289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244420357181372