Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq34444 122 7e-22 seq46367 116 3e-20 seq55480 113 3e-19 seq55479 113 3e-19 seq47455 111 1e-18 seq36817 111 1e-18 seq52016 104 2e-16 seq48697 102 6e-16 seq40567 102 6e-16 seq48515 100 2e-15 seq41773 98.7 7e-15 seq34978 98.7 7e-15 seq39211 95.1 9e-14 seq62351 93.3 3e-13 seq61869 93.3 3e-13 seq61372 93.3 3e-13 seq61371 93.3 3e-13 seq52451 93.3 3e-13 seq52450 93.3 3e-13 seq51760 93.3 3e-13 seq65776 91.5 1e-12 seq65678 91.5 1e-12 seq64573 91.5 1e-12 seq40234 91.5 1e-12 seq40074 91.5 1e-12 seq37636 91.5 1e-12 seq57258 87.8 1e-11 seq57257 87.8 1e-11 seq58486 86.0 5e-11 >seq34444 Length=63150 Score = 122 bits (134), Expect = 7e-22 Identities = 196/282 (70%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 1049868 CCAAAATCACTAACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGA 1049927 ||||| ||| || |||||||||||||| | || | || ||||||| |||||||| Sbjct 18551 CCAAAGTCAGAGACCTTGACATTCCACTTGGTGTCCAAGAGAAGATTCAGGGACTTGAGG 18610 Query 1049928 TCACGATGAGTGATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCA 1049987 || ||||| ||| || || || || | ||| | ||| ||||| | |||||| || || Sbjct 18611 TCGCGATGGACGATGCCCGACGAGTGGAGGAATTCCATGCCCTTGGCTGCTTGGTAGGCC 18670 Query 1049988 ATTTTGACTTTGAGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAAATCATGC 1050047 || ||| | ||| || | || || || || | | ||||| | || | |||| Sbjct 18671 ATCTTGGCAGAGAGCGCGTAGGGGATGTCGGGTACCAACTCGTTGTGCAGGAGATCAAAG 18730 Query 1050048 AATGAGCCAAGAGCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCA 1050107 | || || ||||||||| | ||||| || ||| |||| ||| || || || | || Sbjct 18731 AGCGATCCGAGAGCCATGTACTCCATGACGATGAACATCCGGGGCGGCTTGGTGCAGGCG 18790 Query 1050108 GCCATGAAAAGAACAACGTTAGGATGTCGCAAAGTTGTCATT 1050149 |||||||| || || ||||| ||||| |||| | |||||| Sbjct 18791 GCCATGAACAGCACCACGTTGGGATGACGCAGCGCCGTCATT 18832 Score = 105 bits (116), Expect = 5e-17 Identities = 190/278 (68%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 1039913 GTAAGACCAAAATCACTGACCTTGACATTCCATTTTGAATCCAAAAGCAAATTAAGCGAC 1039972 || || ||||| ||| ||||||||||||||| || | ||||| || | ||| || ||| Sbjct 18545 GTGAGGCCAAAGTCAGAGACCTTGACATTCCACTTGGTGTCCAAGAGAAGATTCAGGGAC 18604 Query 1039973 TTCAAATCTCGATGAACAATACCTGATGAATGAAGAAAATGCATACCTTTTGAAGCCTGA 1040032 || | || ||||| || || || || || || || || | ||| || || | || || Sbjct 18605 TTGAGGTCGCGATGGACGATGCCCGACGAGTGGAGGAATTCCATGCCCTTGGCTGCTTGG 18664 Query 1040033 TAAGCCATCTTAATTTTAAGAGCATAAGGAATTTCTGGAATAAGTTCGTTACCAAGAAGA 1040092 || |||||||| || || || || || || || | | ||||| || ||| Sbjct 18665 TAGGCCATCTTGGCAGAGAGCGCGTAGGGGATGTCGGGTACCAACTCGTTGTGCAGGAGA 18724 Query 1040093 TCGTAAAGAGATCCAAGAGACATAAACTCCATCACAATACACATATTTGGTGATTTTGTA 1040152 || | || ||||| |||| ||| ||||||| || || |||| || | || || Sbjct 18725 TCAAAGAGCGATCCGAGAGCCATGTACTCCATGACGATGAACATCCGGGGCGGCTTGGTG 18784 Query 1040153 CTAGCAGCCATAAACAAAACCACATTGGGATGACGTAG 1040190 | || ||||| |||| ||||| ||||||||||| || Sbjct 18785 CAGGCGGCCATGAACAGCACCACGTTGGGATGACGCAG 18822 >seq46367 Length=2701 Score = 116 bits (128), Expect = 3e-20 Identities = 183/262 (70%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 1039931 ACCTTGACATTCCATTTTGAATCCAAAAGCAAATTAAGCGACTTCAAATCTCGATGAACA 1039990 |||||||| |||||||| || | |||||||| || ||||| | || ||||| ||| Sbjct 1939 ACCTTGACGTTCCATTTGCTGTCGAGGAGCAAATTGAGGGACTTGAGGTCGCGATGCACA 1998 Query 1039991 ATACCTGATGAATGAAGAAAATGCATACCTTTTGAAGCCTGATAAGCCATCTTAATTTTA 1040050 || || || || || || || ||||| || || | ||||| || |||||||| | ||| Sbjct 1999 ATGCCCGACGAGTGGAGGAAGTGCATCCCCTTGGCCGCCTGGTAGGCCATCTTGAATTTG 2058 Query 1040051 AGAGCATAAGGAATTTCTGGAATAAGTTCGTTACCAAGAAGATCGTAAAGAGATCCAAGA 1040110 || | | || || || || || || ||||| || || ||||| || || ||||| Sbjct 2059 AGGCCGTGGGGGATGTCCGGTATGAGCTCGTTCTGGAGCAGGTCGTAGAGCGACCCAAGC 2118 Query 1040111 GACATAAACTCCATCACAATACACATATTTGGTGATTTTGTACTAGCAGCCATAAACAAA 1040170 | ||| ||||||||||| || |||| || | | || | || ||||| || | Sbjct 2119 GCCATGAACTCCATCACGATGCACAGCCGCGGCGGTCGCGTGCAGGCCGCCATGAAGAGG 2178 Query 1040171 ACCACATTGGGATGACGTAGAC 1040192 ||||| ||||| || || |||| Sbjct 2179 ACCACGTTGGGGTGCCGCAGAC 2200 >seq55480 Length=4197 Score = 113 bits (124), Expect = 3e-19 Identities = 181/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || || ||||||||||| | || || || || || | || ||||| || || || | Sbjct 291 ACCTTAACATTCCACTTGTTGTCGAGCAGGAGGTTGAGCGATTTGAGGTCGCGGTGGACG 350 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || || || || | ||| ||||| ||||| | || || || || | ||||| ||| Sbjct 351 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCAGCTTGACCTTG 410 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAAATCATGCAATGAGCCAAGA 1050059 || | | || | || || || || ||||| | || || || | || |||||| || Sbjct 411 AGTGGGAGCGGCAGCTCCGGTATCAGCTCGTTGTGCAGCACGTCGTACAGTGAGCCGAGG 470 Query 1050060 GCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCCATGAAAAGA 1050119 ||||||| ||||| || | |||||| || || ||||| || || |||||||| || Sbjct 471 GCCATGAGCTCCATCACCAGGCACATCTTCTCGGGCTTAGTCGAGGCCGCCATGAACAGC 530 Query 1050120 ACAACGTTAGGATGTCGCAA 1050139 || ||||| || || ||||| Sbjct 531 ACCACGTTGGGGTGCCGCAA 550 >seq55479 Length=4283 Score = 113 bits (124), Expect = 3e-19 Identities = 181/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || || ||||||||||| | || || || || || | || ||||| || || || | Sbjct 291 ACCTTAACATTCCACTTGTTGTCGAGCAGGAGGTTGAGCGATTTGAGGTCGCGGTGGACG 350 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || || || || | ||| ||||| ||||| | || || || || | ||||| ||| Sbjct 351 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCAGCTTGACCTTG 410 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAAATCATGCAATGAGCCAAGA 1050059 || | | || | || || || || ||||| | || || || | || |||||| || Sbjct 411 AGTGGGAGCGGCAGCTCCGGTATCAGCTCGTTGTGCAGCACGTCGTACAGTGAGCCGAGG 470 Query 1050060 GCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCCATGAAAAGA 1050119 ||||||| ||||| || | |||||| || || ||||| || || |||||||| || Sbjct 471 GCCATGAGCTCCATCACCAGGCACATCTTCTCGGGCTTAGTCGAGGCCGCCATGAACAGC 530 Query 1050120 ACAACGTTAGGATGTCGCAA 1050139 || ||||| || || ||||| Sbjct 531 ACCACGTTGGGGTGCCGCAA 550 >seq47455 Length=4091 Score = 111 bits (122), Expect = 1e-18 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1047960 TCAGGAGCAGTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATG 1048019 || || || ||||| || || || || || || |||||| |||||||||| || |||||| Sbjct 3059 TCGGGTGCGGTCCAGCAGGGCGTGCCGCAGCGGGTCATGGTGGCGTTCTCCTCCTTGATG 3118 Query 1048020 CGAGCAAATCCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGAT 1048079 || || || || |||||||| | || || ||||| || ||||| | || | ||| ||| Sbjct 3119 CGCGCGAACCCGAAATCGGCCACCTTCACGTTCCAGTTCTCATCCACCAGCAGATTGGAT 3178 Query 1048080 GGCTTAATGTCACGATGAATAATC 1048103 ||||| | ||| |||||||||||| Sbjct 3179 GGCTTGAGGTCGCGATGAATAATC 3202 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 1061536 ACTTCCCACATAACAATTCCAAAAGAGAATACATCTACTTTCTCTGTATATTTTTCTCCA 1061595 || |||||||| | || || || ||||| || ||| | || | || || || || Sbjct 2990 ACCTCCCACATGATGATGCCGAACGAGAAAACGTCTGCGGATTCGGAGTACTTCTCGCCG 3049 Query 1061596 CGAATAATTTCAGGAGCAGTCCAACAAGGAGTTCCACAACGTGTCATTACGGAATTTTCC 1061655 || | | || || || ||||| || || || || || || ||||| || || ||| Sbjct 3050 CGCAGTACCTCGGGTGCGGTCCAGCAGGGCGTGCCGCAGCGGGTCATGGTGGCGTTCTCC 3109 Query 1061656 TCTTTGATACGTGCAAATCCAAAATCAGCAATTTTCACATTCATACTATCATCAACTAGA 1061715 || ||||| || || || || ||||| || | ||||| ||| | ||||| || || Sbjct 3110 TCCTTGATGCGCGCGAACCCGAAATCGGCCACCTTCACGTTCCAGTTCTCATCCACCAGC 3169 Query 1061716 ATATTGGATGGTTTAATGTCACGATGAATAATAATTGG 1061753 | ||||||||| || | ||| ||||||||||| || || Sbjct 3170 AGATTGGATGGCTTGAGGTCGCGATGAATAATCATCGG 3207 >seq36817 Length=2297 Score = 111 bits (122), Expect = 1e-18 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1047960 TCAGGAGCAGTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATG 1048019 || || || ||||| || || || || || || |||||| |||||||||| || |||||| Sbjct 1265 TCGGGTGCGGTCCAGCAGGGCGTGCCGCAGCGGGTCATGGTGGCGTTCTCCTCCTTGATG 1324 Query 1048020 CGAGCAAATCCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGAT 1048079 || || || || |||||||| | || || ||||| || ||||| | || | ||| ||| Sbjct 1325 CGCGCGAACCCGAAATCGGCCACCTTCACGTTCCAGTTCTCATCCACCAGCAGATTGGAT 1384 Query 1048080 GGCTTAATGTCACGATGAATAATC 1048103 ||||| | ||| |||||||||||| Sbjct 1385 GGCTTGAGGTCGCGATGAATAATC 1408 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 1061536 ACTTCCCACATAACAATTCCAAAAGAGAATACATCTACTTTCTCTGTATATTTTTCTCCA 1061595 || |||||||| | || || || ||| | || ||| | ||| | || || || || Sbjct 1196 ACCTCCCACATGATGATGCCGAACGAGTAAACGTCTGCGGACTCGGAGTACTTCTCGCCG 1255 Query 1061596 CGAATAATTTCAGGAGCAGTCCAACAAGGAGTTCCACAACGTGTCATTACGGAATTTTCC 1061655 || | | || || || ||||| || || || || || || ||||| || || ||| Sbjct 1256 CGCAGTACCTCGGGTGCGGTCCAGCAGGGCGTGCCGCAGCGGGTCATGGTGGCGTTCTCC 1315 Query 1061656 TCTTTGATACGTGCAAATCCAAAATCAGCAATTTTCACATTCATACTATCATCAACTAGA 1061715 || ||||| || || || || ||||| || | ||||| ||| | ||||| || || Sbjct 1316 TCCTTGATGCGCGCGAACCCGAAATCGGCCACCTTCACGTTCCAGTTCTCATCCACCAGC 1375 Query 1061716 ATATTGGATGGTTTAATGTCACGATGAATAATAATTGG 1061753 | ||||||||| || | ||| ||||||||||| || || Sbjct 1376 AGATTGGATGGCTTGAGGTCGCGATGAATAATCATCGG 1413 >seq52016 Length=2700 Score = 104 bits (114), Expect = 2e-16 Identities = 180/262 (69%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 1039931 ACCTTGACATTCCATTTTGAATCCAAAAGCAAATTAAGCGACTTCAAATCTCGATGAACA 1039990 |||||||| |||||||| || | |||| ||| || ||||| | |||||||| || Sbjct 763 ACCTTGACGTTCCATTTGCCGTCGAGGAGCAGATTGAGGGACTTGAGGTCTCGATGCACG 704 Query 1039991 ATACCTGATGAATGAAGAAAATGCATACCTTTTGAAGCCTGATAAGCCATCTTAATTTTA 1040050 || || || || || || || ||||| || || | ||||| || |||||||| | || Sbjct 703 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCATCTTGAACTTG 644 Query 1040051 AGAGCATAAGGAATTTCTGGAATAAGTTCGTTACCAAGAAGATCGTAAAGAGATCCAAGA 1040110 || | | || || || || || || ||||| || || ||||| || || || || Sbjct 643 AGGCCGTGGGGGATGTCCGGTATGAGCTCGTTCTGGAGCAGGTCGTAGAGCGACCCTAGC 584 Query 1040111 GACATAAACTCCATCACAATACACATATTTGGTGATTTTGTACTAGCAGCCATAAACAAA 1040170 | ||| ||||||||||| || |||| || | | || | || ||||| || | Sbjct 583 GCCATGAACTCCATCACGATGCACAGCCGCGGCGGTCGAGTGCAGGCCGCCATGAAGAGG 524 Query 1040171 ACCACATTGGGATGACGTAGAC 1040192 ||||| ||||| || || |||| Sbjct 523 ACCACGTTGGGGTGCCGCAGAC 502 >seq48697 Length=3077 Score = 102 bits (112), Expect = 6e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1050051 GAGCCAAGAGCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCC 1050110 ||||| || |||||| | ||||| ||||||||||| |||||||| || || | || ||| Sbjct 26 GAGCCGAGGGCCATGTACTCCATGACAATGCACATCTTGGGTGGCTTGGTGCATGCCGCC 85 Query 1050111 ATGAAAAGAACAACGTTAGGATGTCGCAAAGTTGTCATTACTCTGACCTCATCCTTGAA 1050169 ||||| || || ||||| ||||| |||| | |||||| || | ||||| |||||||| Sbjct 86 ATGAACAGCACCACGTTGGGATGCCGCAGTGCTGTCATCACCCGCACCTCCTCCTTGAA 144 >seq40567 Length=1799 Score = 102 bits (112), Expect = 6e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1050051 GAGCCAAGAGCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCC 1050110 ||||| || |||||| | ||||| ||||||||||| |||||||| || || | || ||| Sbjct 1774 GAGCCGAGGGCCATGTACTCCATGACAATGCACATCTTGGGTGGCTTGGTGCATGCCGCC 1715 Query 1050111 ATGAAAAGAACAACGTTAGGATGTCGCAAAGTTGTCATTACTCTGACCTCATCCTTGAA 1050169 ||||| || || ||||| ||||| |||| | |||||| || | ||||| |||||||| Sbjct 1714 ATGAACAGCACCACGTTGGGATGCCGCAGTGCTGTCATCACCCGCACCTCCTCCTTGAA 1656 >seq48515 Length=7621 Score = 100 bits (110), Expect = 2e-15 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 1049853 TTGAATTTAGTCAATCCAAAATCACTAACTTTGACATTCCACTTAATATCAAGAAGTAGA 1049912 ||||| || || | ||||| || || || ||||| |||||||| || || || || Sbjct 6508 TTGAACTTGGTGAGACCAAAGTCGCTCACCTTGACGTTCCACTTGGCGTCCAGCAGCAGG 6449 Query 1049913 TTCAAAGACTTGAGATCACGATGAGTGATTCCTGAGGAATGCAAGAAATGCATACCCTTT 1049972 || | ||||||||||| || || ||| || || || || | ||| ||||| ||||| Sbjct 6448 TTGAGCGACTTGAGATCGCGGTGCACGATGCCCGACGAGTGGAGGAAGTGCATGCCCTTG 6389 Query 1049973 GATGCTTGATATGCAATTTTGACTTTGAGAGCAAAAGGTATATCTGGGATGAGTTCGTTT 1050032 || || || || || || ||| | ||||| || || || || || ||||| |||||||| Sbjct 6388 GAGGCCTGGTAGGCCATCTTGGCCTTGAGCGCGAACGGAATGTCCGGGATCAGTTCGTTG 6329 Query 1050033 TTCAACAA 1050040 | || ||| Sbjct 6328 TGCAGCAA 6321 >seq41773 Length=1161 Score = 98.7 bits (108), Expect = 7e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1050051 GAGCCAAGAGCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCC 1050110 ||||||||||||||| | ||||| || |||||||| ||||| | ||| || || || ||| Sbjct 888 GAGCCAAGAGCCATGTACTCCATGACGATGCACATCTTGGGCGCTTTGGTCGACGCCGCC 947 Query 1050111 ATGAAAAGAACAACGTTAGGATGTCGCAAAGTTGTCATTACTCTGACCT 1050159 ||||| || || ||||| ||||| ||||| | ||||| |||| |||| Sbjct 948 ATGAACAGCACCACGTTGGGATGCCGCAACGCCGTCATCACTCGCACCT 996 >seq34978 Length=2237 Score = 98.7 bits (108), Expect = 7e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1050051 GAGCCAAGAGCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCC 1050110 ||||| ||||||||||| ||||| || |||||||| ||||| || || || || || ||| Sbjct 164 GAGCCGAGAGCCATGAACTCCATGACGATGCACATCTTGGGCGGCTTGGTCGACGCCGCC 223 Query 1050111 ATGAAAAGAACAACGTTAGGATGTCGCAAAGTTGTCATTACTCTGACCT 1050159 ||||| ||||| ||||| ||||| ||||| | ||||| || | |||| Sbjct 224 ATGAACAGAACCACGTTGGGATGCCGCAACGCCGTCATCACCCGCACCT 272 >seq39211 Length=765 Score = 95.1 bits (104), Expect = 9e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 1050051 GAGCCAAGAGCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCC 1050110 ||||| || |||||||| ||||| ||||||||||| ||||| || || || || || ||| Sbjct 182 GAGCCGAGGGCCATGAACTCCATGACAATGCACATCTTGGGCGGCTTGGTCGACGCCGCC 241 Query 1050111 ATGAAAAGAACAACGTTAGGATGTCGCAAAGTTGTCATTACTCTGACCTCAT 1050162 ||||| || || ||||| ||||| ||||| | ||||| || | |||| || Sbjct 242 ATGAACAGCACCACGTTGGGATGCCGCAACGCCGTCATCACCCGCACCTGAT 293 >seq62351 Length=3034 Score = 93.3 bits (102), Expect = 3e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 ||||| || || || || || || |||||| ||||||||||||| |||||||| || || Sbjct 2547 GTCCAGCAGGGGGTGCCGCAGCGGGTCATGGTGGCGTTCTCTTCCTTGATGCGCGCGAAC 2606 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTT 1048084 || || ||||| | || || ||||| ||||| |||| ||| | ||| || ||||| Sbjct 2607 CCGAAGTCGGCCACCTTCACGTTCCAGTTTTCGTCGACGAGCAGATTGGAGGGCTT 2662 >seq61869 Length=2361 Score = 93.3 bits (102), Expect = 3e-13 Identities = 238/360 (66%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 1049682 CTCATACCAAAATAGGGTTGATCACGAGTTATCAATTCCCACATAATAATGCCAAACGAA 1049741 ||||| |||| ||||||||| || || | | ||||| | || |||||||| || Sbjct 1531 CTCATGCCAATGTAGGGTTGAGTGCGGGTGAGGAGCTCCCAGAGGATGATGCCAAAGGAG 1472 Query 1049742 TAAACATCCGACAAAATGTAGTCCACTTCTCTATCTTCACTAAGAATTTCAGGAGCTGTC 1049801 || || || | || ||| ||||||| || | || |||| | || || || ||| Sbjct 1471 TAGACGTCGGCCAGGATGAAGTCCACGTCGCCCGACTCGTTAAGCACCTCCGGCGCCGTC 1412 Query 1049802 CATTGAATAGTACCTGCAAATTTTTCAGGATTAATAGA-CTTAACATCTGATTTGAATTT 1049860 || || | | || || | | | ||| | | ||| || || ||||| || Sbjct 1411 CAGTGCACGCTCCCAGCCACGTCG-CGTGATGTCTTGTTCTTGACGTCCTCCTTGAACTT 1353 Query 1049861 AGTCAATCCAAAATCACTAACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGA 1049920 || | ||||| || || || ||||| |||||||| || || || || || | || Sbjct 1352 GGTGAGACCAAAGTCGCTCACCTTGACGTTCCACTTGGAGTCGAGCAGCAGGTTGAGCGA 1293 Query 1049921 CTTGAGATCACGATGAGTGATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTG 1049980 ||||||||| || || ||| || || || || | ||| ||||| ||||| || || || Sbjct 1292 CTTGAGATCGCGGTGCACGATGCCCGACGAGTGAAGGAAGTGCATGCCCTTGGAGGCCTG 1233 Query 1049981 ATATGCAATTTTGACTTTGAGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAA 1050040 || || || ||| | ||||| || || || | || ||||| || ||||| | || ||| Sbjct 1232 GTAGGCCATCTTGGCCTTGAGCGCGAACGGCAGCTCCGGGATCAGCTCGTTGTGCAGCAA 1173 >seq61372 Length=6290 Score = 93.3 bits (102), Expect = 3e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || |||||||||||||| || || || || || | ||||||||||| ||||| | Sbjct 5574 ACCTTGACATTCCACTTGGAGTCGAGCAGCAGGTTGAGGGACTTGAGATCGCGATGCACG 5515 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || |||||||||||||||||||| || || || ||||| || || | ||||| || Sbjct 5514 ATGCCAGAGGAATGCAAGAAATGCATTCCTTTGGAGGCTTGGTAGGCGACCTTGACCTTC 5455 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAA 1050040 | | | ||| || || || || ||||| | |||||| Sbjct 5454 ATAATGATAGGGATCTCCACGACTAGCTCGTTGTGCAACAA 5414 >seq61371 Length=6309 Score = 93.3 bits (102), Expect = 3e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || |||||||||||||| || || || || || | ||||||||||| ||||| | Sbjct 5593 ACCTTGACATTCCACTTGGAGTCGAGCAGCAGGTTGAGGGACTTGAGATCGCGATGCACG 5534 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || |||||||||||||||||||| || || || ||||| || || | ||||| || Sbjct 5533 ATGCCAGAGGAATGCAAGAAATGCATTCCTTTGGAGGCTTGGTAGGCGACCTTGACCTTC 5474 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAA 1050040 | | | ||| || || || || ||||| | |||||| Sbjct 5473 ATAATGATAGGGATCTCCACGACTAGCTCGTTGTGCAACAA 5433 >seq52451 Length=6202 Score = 93.3 bits (102), Expect = 3e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || |||||||||||||| || || || || || | ||||||||||| ||||| | Sbjct 3640 ACCTTGACATTCCACTTGGAGTCGAGCAGCAGGTTGAGGGACTTGAGATCGCGATGCACG 3581 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || |||||||||||||||||||| || || || ||||| || || | ||||| || Sbjct 3580 ATGCCAGAGGAATGCAAGAAATGCATTCCTTTGGAGGCTTGGTAGGCGACCTTGACCTTC 3521 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAA 1050040 | | | ||| || || || || ||||| | |||||| Sbjct 3520 ATAATGATAGGGATCTCCACGACTAGCTCGTTGTGCAACAA 3480 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1047951 CGAATAATTTCAGGAGCAGTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCT 1048010 || || || || || || |||||||| || || || || |||||||| | |||||||| Sbjct 5968 CGGATGATCTCCGGCGCCGTCCAACAGGGCGTGCCGCATCGAGTCATCGTCGCGTTCTCC 5909 Query 1048011 TCTTTGATGCGAGCAAATCCAAAATCGGCAATTTTGACATTCCAATTTTCATC 1048063 || ||||| || ||||| ||||| ||||| | || ||||||||||| || || Sbjct 5908 TCCTTGATCCGCGCAAACCCAAAGTCGGCCACCTTCACATTCCAATTCTCGTC 5856 >seq52450 Length=6202 Score = 93.3 bits (102), Expect = 3e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || |||||||||||||| || || || || || | ||||||||||| ||||| | Sbjct 3640 ACCTTGACATTCCACTTGGAGTCGAGCAGCAGGTTGAGGGACTTGAGATCGCGATGCACG 3581 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || |||||||||||||||||||| || || || ||||| || || | ||||| || Sbjct 3580 ATGCCAGAGGAATGCAAGAAATGCATTCCTTTGGAGGCTTGGTAGGCGACCTTGACCTTC 3521 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAA 1050040 | | | ||| || || || || ||||| | |||||| Sbjct 3520 ATAATGATAGGGATCTCCACGACTAGCTCGTTGTGCAACAA 3480 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1047951 CGAATAATTTCAGGAGCAGTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCT 1048010 || || || || || || |||||||| || || || || |||||||| | |||||||| Sbjct 5968 CGGATGATCTCCGGCGCCGTCCAACAGGGCGTGCCGCATCGAGTCATCGTCGCGTTCTCC 5909 Query 1048011 TCTTTGATGCGAGCAAATCCAAAATCGGCAATTTTGACATTCCAATTTTCATC 1048063 || ||||| || ||||| ||||| ||||| | || ||||||||||| || || Sbjct 5908 TCCTTGATCCGCGCAAACCCAAAGTCGGCCACCTTCACATTCCAATTCTCGTC 5856 >seq51760 Length=3033 Score = 93.3 bits (102), Expect = 3e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 ||||| || || || || || || |||||| ||||||||||||| |||||||| || || Sbjct 2546 GTCCAGCAGGGGGTGCCGCAGCGGGTCATGGTGGCGTTCTCTTCCTTGATGCGCGCGAAC 2605 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTT 1048084 || || ||||| | || || ||||| ||||| |||| ||| | ||| || ||||| Sbjct 2606 CCGAAGTCGGCCACCTTCACGTTCCAGTTTTCGTCGACGAGCAGATTGGAGGGCTT 2661 >seq65776 Length=1573 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 ||||| || ||||| || || || |||||| ||||||| || || ||||||||||| || Sbjct 1161 GTCCAGCAGGGAGTGCCGCAGCGGGTCATGGTGGCGTTGTCCTCCTTGATGCGAGCGAAC 1102 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTTAATG 1048088 || || ||||| | ||||| ||||| | || || | ||| | || |||||||| | | Sbjct 1101 CCGAAGTCGGCCACCTTGACGTTCCACTCGTCGTCCACGAGCAGGTTGGATGGCTTCACG 1042 Query 1048089 TCACGATG 1048096 || ||||| Sbjct 1041 TCCCGATG 1034 >seq65678 Length=3820 Score = 91.5 bits (100), Expect = 1e-12 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || ||||| |||||||| | || || || || || | ||||||||||| || || | Sbjct 2317 ACCTTGACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAGATCGCGGTGCACG 2258 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || || || |||||||| ||||| ||||| | || || || || || || || ||| Sbjct 2257 ATGCCCGACGAGTGCAAGAAGTGCATGCCCTTGGCCGCCTGGTACGCCATCTTCACCTTG 2198 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACA 1050039 || || || || | || |||||||| ||||| | || || Sbjct 2197 AGCGCGAATGGCAGCTCCGGGATGAGCTCGTTGTGCAGCA 2158 Score = 86.0 bits (94), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1049880 ACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGAGTG 1049939 || ||||| |||||||| | || || || || || | |||||||| || || || | Sbjct 1671 ACCTTGACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAGRTCGCGGTGCACG 1612 Query 1049940 ATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGACTTTG 1049999 || || || || |||| ||| ||||| ||||| | || || || || || ||| | ||| Sbjct 1611 ATGCCCGACGAGTGCAGGAAGTGCATGCCCTTGGCCGCCTGGTACGCCATCTTGGCCTTG 1552 Query 1050000 AGAGCAAAAGGTATATCTGGGATGAGTTCGTTTTTCAACAA 1050040 |||| || || | || |||||||| ||||| | || ||| Sbjct 1551 AGAGTGAAGGGCAGCTCCGGGATGAGCTCGTTGTGCAGCAA 1511 >seq64573 Length=12375 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 ||||| || || || || || || |||||| ||||||||||||| |||||||| || ||| Sbjct 168 GTCCAGCAGGGGGTGCCGCAGCGGGTCATGGTGGCGTTCTCTTCCTTGATGCGTGCGAAT 227 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTTAATG 1048088 || || ||||| | || || ||||| || || |||| || | ||| || ||||| | | Sbjct 228 CCGAAGTCGGCCACCTTTACGTTCCAGTTCTCGTCGACCAGCAGATTGGAGGGCTTGAGG 287 Query 1048089 TCACGATG 1048096 || || || Sbjct 288 TCGCGGTG 295 >seq40234 Length=812 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 ||||| || || || || || || |||||| ||||||||||||| |||||||| || ||| Sbjct 791 GTCCAGCAGGGGGTGCCGCAGCGGGTCATGGTGGCGTTCTCTTCCTTGATGCGTGCGAAT 732 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTTAATG 1048088 || || ||||| | || || ||||| || || |||| || | ||| || ||||| | | Sbjct 731 CCGAAGTCGGCCACCTTTACGTTCCAGTTCTCGTCGACCAGCAGATTGGAGGGCTTGAGG 672 Query 1048089 TCACGATG 1048096 || || || Sbjct 671 TCGCGGTG 664 >seq40074 Length=595 Score = 91.5 bits (100), Expect = 1e-12 Identities = 135/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 1050051 GAGCCAAGAGCCATGAATTCCATTACAATGCACATTTTGGGTGGTTTAGTTGAAGCAGCC 1050110 ||||| || |||||||| ||||| || |||||||| ||||| || || || || || ||| Sbjct 194 GAGCCGAGGGCCATGAACTCCATGACGATGCACATCTTGGGCGGCTTGGTGGAGGCGGCC 135 Query 1050111 ATGAAAAGAACAACGTTAGGATGTCGCAAAGTTGTCATTACTCTGACCTCATCCTTGAAA 1050170 ||||| || || ||||| || || |||| | ||||| || | ||||| |||||||| Sbjct 134 ATGAAGAGGACCACGTTGGGGTGCCGCAGCGCGGTCATGACGCGCACCTCGTCCTTGAAG 75 Query 1050171 TTTCTTTCAATATCTTTGGTGATGGTTTTATCTGGCGATATCATCTTGACAGCAACTTCA 1050230 || | || || || || | | || | | | ||||||||||| || || || Sbjct 74 TTGCGCTCCATGTCGCGCGTCACG---TTGGCCGAGGTCATCATCTTGACCGCCACCTCG 18 Query 1050231 GTACCTCTCCA 1050241 || || |||| Sbjct 17 GTGCCCTTCCA 7 >seq37636 Length=1455 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 ||||| || || || || || || |||||| ||||||||||||| |||||||| || ||| Sbjct 278 GTCCAGCAGGGGGTGCCGCAGCGGGTCATGGTGGCGTTCTCTTCCTTGATGCGTGCGAAT 219 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTTAATG 1048088 || || ||||| | || || ||||| || || |||| || | ||| || ||||| | | Sbjct 218 CCGAAGTCGGCCACCTTTACGTTCCAGTTCTCGTCGACCAGCAGATTGGAGGGCTTGAGG 159 Query 1048089 TCACGATG 1048096 || || || Sbjct 158 TCGCGGTG 151 >seq57258 Length=3412 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1047951 CGAATAATTTCAGGAGCAGTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCT 1048010 || || || || || || |||||||| || || || || |||||||| | |||||||| Sbjct 1928 CGGATGATCTCCGGCGCCGTCCAACAGGGCGTGCCGCATCGAGTCATCGTCGCGTTCTCC 1987 Query 1048011 TCTTTGATGCGAGCAAATCCAAAATCGGCAATTTTGACATTCCAATTTTCATC 1048063 || ||||| || ||||| ||||| ||||| | || ||||||||||| || || Sbjct 1988 TCCTTGATCCGCGCAAACCCAAAGTCGGCCACCTTCACATTCCAATTCTCGTC 2040 >seq57257 Length=3524 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1047951 CGAATAATTTCAGGAGCAGTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCT 1048010 || || || || || || |||||||| || || || || |||||||| | |||||||| Sbjct 2040 CGGATGATCTCCGGCGCCGTCCAACAGGGCGTGCCGCATCGAGTCATCGTCGCGTTCTCC 2099 Query 1048011 TCTTTGATGCGAGCAAATCCAAAATCGGCAATTTTGACATTCCAATTTTCATC 1048063 || ||||| || ||||| ||||| ||||| | || ||||||||||| || || Sbjct 2100 TCCTTGATCCGCGCAAACCCAAAGTCGGCCACCTTCACATTCCAATTCTCGTC 2152 >seq58486 Length=3886 Score = 86.0 bits (94), Expect = 5e-11 Identities = 96/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 1049877 CTAACTTTGACATTCCACTTAATATCAAGAAGTAGATTCAAAGACTTGAGATCACGATGA 1049936 || || ||||| |||||||| ||| || || ||||| | |||||||||||||||||| Sbjct 337 CTTACCTTGACGTTCCACTTGGAATCCAGCAGAAGATTGAGGGACTTGAGATCACGATGA 396 Query 1049937 GTGATTCCTGAGGAATGCAAGAAATGCATACCCTTTGATGCTTGATATGCAATTTTGA-C 1049995 ||| || || || ||||| || ||||| ||||| || || || || || | |||| | Sbjct 397 ACGATGCCCGACGAGTGCAAAAAGTGCATGCCCTTGGAGGCCTGGTAGGCCACCTTGACC 456 Query 1049996 TTTGAGA 1050002 |||| || Sbjct 457 TTTGGGA 463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3737329543826658