Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_023714.1 Length=153882 Score E Sequences producing significant alignments: (Bits) Value seq38569 91.5 1e-13 >seq38569 Length=123680 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/165 (73%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 114264 GCCCAAGCCCTGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTA 114323 ||||| | | | || || ||| |||||||| || || | || |||||||||||| |||| Sbjct 60803 GCCCAGGGCATTCCGGT-CGGGCCGGGCCGCGGTTCGGGCGCGGGCTCGCTGGTCGCCTA 60745 Query 114324 CGTCATGGGCATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCAT 114383 | || ||| ||| |||| |||||| || || |||| |||||||||||||| | Sbjct 60744 TGCGCTGACCATTACCGACCTCGATCCGATCCGGTTCGGCCTGCTGTTCGAGCGCTTCCT 60685 Query 114384 CAACCCGGACCGC--CCCGACTTCCCCGACATCGACGTCGACTTC 114426 ||| ||||| ||| ||| | || ||| ||||| |||||||| Sbjct 60684 CAATCCGGAACGCGTGTCGA--TGCCGGACTTCGACATCGACTTC 60642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491880669632560