Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_023737.1 Length=155586 Score E Sequences producing significant alignments: (Bits) Value seq38569 89.7 5e-13 >seq38569 Length=123680 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/147 (74%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 115021 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 115080 ||| |||||||| || || | || |||||||||||| |||| | || ||| ||| Sbjct 60786 CGGGCCGGGCCGCGGTTCGGGCGCGGGCTCGCTGGTCGCCTATGCGCTGACCATTACCGA 60727 Query 115081 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC--CCC 115138 |||| |||||| || || |||| |||||||||||||| |||| ||||| ||| | Sbjct 60726 CCTCGATCCGATCCGGTTCGGCCTGCTGTTCGAGCGCTTCCTCAATCCGGAACGCGTGTC 60667 Query 115139 GACTTCCCCGACATCGACGTCGACTTC 115165 || | || ||| ||||| |||||||| Sbjct 60666 GA--TGCCGGACTTCGACATCGACTTC 60642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497328887031280