Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015-
01-07] 67,233 sequences; 106,836,370 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq58327 158 3e-33
seq52016 118 3e-21
seq57533 113 1e-19
seq34444 113 1e-19
seq55480 109 1e-18
seq55479 109 1e-18
seq49679 105 2e-17
seq46367 105 2e-17
seq41198 102 2e-16
seq37153 98.7 2e-15
seq65093 96.9 8e-15
seq35527 96.9 8e-15
seq63570 93.3 1e-13
seq58611 93.3 1e-13
seq49680 93.3 1e-13
seq64879 87.8 4e-12
seq63440 86.0 1e-11
seq62961 86.0 1e-11
seq62844 86.0 1e-11
seq55627 86.0 1e-11
seq55626 86.0 1e-11
seq54035 86.0 1e-11
seq53890 86.0 1e-11
seq49559 86.0 1e-11
seq48929 86.0 1e-11
seq65788 84.2 5e-11
seq40702 84.2 5e-11
>seq58327
Length=11981
Score = 158 bits (174), Expect = 3e-33
Identities = 198/272 (73%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || |||||||| | | ||| || | ||||| || |||||||| ||||||||
Sbjct 8696 GCCAAAGTCGGAGACCTTGAGGTTCCACTTGTTGTCGAGCAGGAGGTTGAGCGACTTGAG 8637
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGC 92984
||| | ||| |||| ||| || ||||| || ||||| ||||| ||||| ||| |
Sbjct 8636 GTCGCAGTGGGCGACGCCGGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGAG 8577
Query 92985 GAGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTA 93044
|||| | | |||| ||| || || |||| | |||||||||||| |||| |||||
Sbjct 8576 CAGCTTGATGCGGAGAAGCGGGGGAATGTCGGGGACGAGCTCGTTGTGGAGGAGCTCGTA 8517
Query 93045 GAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGC 93104
||| || || || |||| | ||||| | ||| ||||| || ||||| || || ||
Sbjct 8516 GAGGGAGCCGAGGGCCATGAACTCCATGATGATGAACATGCGCGGGGGCTTGGTGCAGGC 8457
Query 93105 TGCCATAAAGAGGATGACGTTCGGATGGCGCA 93136
|||| ||||||| ||||| || |||||||
Sbjct 8456 GCCCATGAAGAGGACTACGTTGGGGTGGCGCA 8425
>seq52016
Length=2700
Score = 118 bits (130), Expect = 3e-21
Identities = 185/261 (71%), Gaps = 4/261 (2%)
Strand=Plus/Minus
Query 92878 ACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCG 92937
||||| ||| |||||| |||||| | || ||||| ||||||||||||| || ||
Sbjct 763 ACCTTGACGTTCCATTTGCCGTCGAGGAGCAGATTGAGGGACTTGAGGTCTCGATGCACG 704
Query 92938 ATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCGAGC-TGAACACA 92996
||||| || ||||| || ||||| ||||| ||||| ||| ||| | | |||||
Sbjct 703 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCATCTTGAACTTG 644
Query 92997 AAGAACCG-GAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAGAGAGAACCAA 93055
| | ||| | || || | || ||||||||||| || || | |||||||| || || |
Sbjct 643 AGG--CCGTGGGGGATGTCCGGTATGAGCTCGTTCTGGAGCAGGTCGTAGAGCGACCCTA 586
Query 93056 GACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCTGCCATAAAGA 93115
| |||| | |||||||| ||||||| || || || || || ||||| ||||
Sbjct 585 GCGCCATGAACTCCATCACGATGCACAGCCGCGGCGGTCGAGTGCAGGCCGCCATGAAGA 526
Query 93116 GGATGACGTTCGGATGGCGCA 93136
||| ||||| || || ||||
Sbjct 525 GGACCACGTTGGGGTGCCGCA 505
>seq57533
Length=4825
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || ||||||||| | || || || || || |||
Sbjct 2824 CAGATCTTCGTCAAGACTCTCACCGGTAAGACGATCACTCTCGAGGTCGAGAGCTCGGAC 2765
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || || ||| ||| ||
Sbjct 2764 ACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAGCAG 2705
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || | ||||| |||||| ||
Sbjct 2704 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAACATC 2645
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| || |||||||| |||
Sbjct 2644 CAGAAGGAGTCCACCCTTCACCTCGTT 2618
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || || || || | ||||| || || || |||
Sbjct 3052 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATTACCCTCGAAGTCGAGAGCTCGGAC 2993
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||||||||| || || || || || ||| || || ||
Sbjct 2992 ACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAGCAG 2933
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || || || | || ||||||| |||||| ||
Sbjct 2932 CGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAACATC 2873
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| || || ||||| |||
Sbjct 2872 CAGAAGGAGTCCACGCTCCACCTCGTT 2846
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || ||||||||| | || || || ||||| ||||
Sbjct 2584 AAGACCCTGACCGGCAAGACGATCACTCTCGAGGTCGAGTCGAGCGACACCATCGAGAAC 2525
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||| ||||| || || || || || || |||||| || | || ||||||
Sbjct 2524 GTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTTC 2465
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || ||||||| |||||| ||||||| |||||
Sbjct 2464 GCCGGCAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCG 2405
Query 206365 ACTCTTCACCTTGT 206378
||||| ||||| ||
Sbjct 2404 ACTCTCCACCTCGT 2391
>seq34444
Length=63150
Score = 113 bits (124), Expect = 1e-19
Identities = 188/272 (69%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| ||||||||||| || ||| || ||| | | ||| || || ||||||||
Sbjct 18550 GCCAAAGTCAGAGACCTTGACATTCCACTTGGTGTCCAAGAGAAGATTCAGGGACTTGAG 18609
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGC 92984
||| | || ||||||| || ||||| || | ||| ||||| || |||||| |||
Sbjct 18610 GTCGCGATGGACGATGCCCGACGAGTGGAGGAATTCCATGCCCTTGGCTGCTTGGTAGGC 18669
Query 92985 GAGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTA 93044
| || || | || | || || |||| | | ||||||||| |||| || |
Sbjct 18670 CATCTTGGCAGAGAGCGCGTAGGGGATGTCGGGTACCAACTCGTTGTGCAGGAGATCAAA 18729
Query 93045 GAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGC 93104
||| || || ||| |||| || ||||| || ||| |||| || ||||| || || ||
Sbjct 18730 GAGCGATCCGAGAGCCATGTACTCCATGACGATGAACATCCGGGGCGGCTTGGTGCAGGC 18789
Query 93105 TGCCATAAAGAGGATGACGTTCGGATGGCGCA 93136
||||| || || | ||||| ||||| ||||
Sbjct 18790 GGCCATGAACAGCACCACGTTGGGATGACGCA 18821
>seq55480
Length=4197
Score = 109 bits (120), Expect = 1e-18
Identities = 180/260 (69%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 92878 ACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCG 92937
||||| || ||| || | ||||| || |||||||| || |||||||| | ||| ||
Sbjct 291 ACCTTAACATTCCACTTGTTGTCGAGCAGGAGGTTGAGCGATTTGAGGTCGCGGTGGACG 350
Query 92938 ATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCGAGCTGAACACAA 92997
||||| || ||||| || ||||| ||||| ||||| ||| ||| |||| ||
Sbjct 351 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCAGCTTGACCTTG 410
Query 92998 AGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAGAGAGAACCAAGA 93057
|| | |||| | || || ||||||||||| || || ||||| || || || ||
Sbjct 411 AGTGGGAGCGGCAGCTCCGGTATCAGCTCGTTGTGCAGCACGTCGTACAGTGAGCCGAGG 470
Query 93058 CCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCTGCCATAAAGAGG 93117
|||| |||||||| | |||||| || ||||| || | || ||||| || ||
Sbjct 471 GCCATGAGCTCCATCACCAGGCACATCTTCTCGGGCTTAGTCGAGGCCGCCATGAACAGC 530
Query 93118 ATGACGTTCGGATGGCGCAA 93137
| ||||| || || |||||
Sbjct 531 ACCACGTTGGGGTGCCGCAA 550
>seq55479
Length=4283
Score = 109 bits (120), Expect = 1e-18
Identities = 180/260 (69%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 92878 ACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCG 92937
||||| || ||| || | ||||| || |||||||| || |||||||| | ||| ||
Sbjct 291 ACCTTAACATTCCACTTGTTGTCGAGCAGGAGGTTGAGCGATTTGAGGTCGCGGTGGACG 350
Query 92938 ATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCGAGCTGAACACAA 92997
||||| || ||||| || ||||| ||||| ||||| ||| ||| |||| ||
Sbjct 351 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCAGCTTGACCTTG 410
Query 92998 AGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAGAGAGAACCAAGA 93057
|| | |||| | || || ||||||||||| || || ||||| || || || ||
Sbjct 411 AGTGGGAGCGGCAGCTCCGGTATCAGCTCGTTGTGCAGCACGTCGTACAGTGAGCCGAGG 470
Query 93058 CCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCTGCCATAAAGAGG 93117
|||| |||||||| | |||||| || ||||| || | || ||||| || ||
Sbjct 471 GCCATGAGCTCCATCACCAGGCACATCTTCTCGGGCTTAGTCGAGGCCGCCATGAACAGC 530
Query 93118 ATGACGTTCGGATGGCGCAA 93137
| ||||| || || |||||
Sbjct 531 ACCACGTTGGGGTGCCGCAA 550
>seq49679
Length=1067
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| ||||| || || || || ||||| | ||||| || || || |||
Sbjct 1048 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAAGTCGAGAGCTCGGAC 989
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || ||| || ||| ||
Sbjct 988 ACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAG 929
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || | ||||| |||||| ||
Sbjct 928 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAACATC 869
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||| ||||| ||
Sbjct 868 CAGAAGGAGTCGACTCTCCACCTCGT 843
>seq46367
Length=2701
Score = 105 bits (116), Expect = 2e-17
Identities = 182/261 (70%), Gaps = 4/261 (2%)
Strand=Plus/Plus
Query 92878 ACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCG 92937
||||| ||| |||||| ||||| | | ||||| ||||||||||| | || |
Sbjct 1939 ACCTTGACGTTCCATTTGCTGTCGAGGAGCAAATTGAGGGACTTGAGGTCGCGATGCACA 1998
Query 92938 ATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCGAGCT-GAACACA 92996
||||| || ||||| || ||||||||||| ||||| ||| ||| | || |||
Sbjct 1999 ATGCCCGACGAGTGGAGGAAGTGCATCCCCTTGGCCGCCTGGTAGGCCATCTTGAATTTG 2058
Query 92997 AAGAACCG-GAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAGAGAGAACCAA 93055
| | ||| | || || | || ||||||||||| || || | |||||||| || ||||
Sbjct 2059 AGG--CCGTGGGGGATGTCCGGTATGAGCTCGTTCTGGAGCAGGTCGTAGAGCGACCCAA 2116
Query 93056 GACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCTGCCATAAAGA 93115
| |||| | |||||||| ||||||| || || || || || ||||| ||||
Sbjct 2117 GCGCCATGAACTCCATCACGATGCACAGCCGCGGCGGTCGCGTGCAGGCCGCCATGAAGA 2176
Query 93116 GGATGACGTTCGGATGGCGCA 93136
||| ||||| || || ||||
Sbjct 2177 GGACCACGTTGGGGTGCCGCA 2197
>seq41198
Length=3949
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| ||||| || || || || ||||| | || || || || || |||
Sbjct 1492 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTCGAGAGCTCGGAC 1551
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| |||||||| || || || || || ||| || ||
Sbjct 1552 ACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGATCAGCAG 1611
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || |||| || |||||| ||
Sbjct 1612 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCTGACTACAACATC 1671
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||||||| || || ||||| ||
Sbjct 1672 CAGAAAGAGTCCACCCTCCACCTCGT 1697
>seq37153
Length=844
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || ||||| ||| | || || || || ||||| ||||
Sbjct 314 AAGACCCTGACCGGCAAGACGATTACTCTCGAGGTCGAGTCGTCCGACACGATCGAGAAC 373
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||||||||| || || || ||||| || || ||| || | || ||||||
Sbjct 374 GTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGCCTCATCTTC 433
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || ||||||| |||||| ||||||| |||||
Sbjct 434 GCCGGCAAGCAGCTTGAGGACGGCCGTACCCTGGCCGACTACAACATCCAGAAGGAGTCC 493
Query 206365 ACTCTTCACCTTGT 206378
|| |||||||| ||
Sbjct 494 ACCCTTCACCTCGT 507
>seq65093
Length=7051
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || |||||||| | || || || || || |||
Sbjct 4509 CAGATCTTCGTCAAGACCCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCCGAC 4450
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || ||| || ||| ||
Sbjct 4449 ACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAGCAG 4390
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || ||||||| |||||| |
Sbjct 4389 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAACATT 4330
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 4329 CAGAAGGAGTCCACCCTCCACCTCGT 4304
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || ||||| ||| | || || || |||
Sbjct 4902 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACTCTCGAGGTCGAGTCGAGCGAC 4843
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||||||||| || || || ||||| || |||||| ||
Sbjct 4842 ACGATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAG 4783
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || || || | || | ||||| |||||| ||
Sbjct 4782 CGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACGCTCGCCGACTACAACATC 4723
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| ||||| ||||| |||
Sbjct 4722 CAGAAGGAGTCGACTCTCCACCTCGTT 4696
>seq35527
Length=2822
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| ||||| || || || || || || | ||||| || || || |||
Sbjct 29 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATTACCCTCGAAGTCGAGAGCTCGGAC 88
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || ||| || || ||
Sbjct 89 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAGCAG 148
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || ||||||| |||||| ||
Sbjct 149 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAACATC 208
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 209 CAGAAGGAGTCCACCCTCCACCTCGT 234
>seq63570
Length=11955
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| ||||| || || || || ||||| | || || || || || |||
Sbjct 7175 CAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCGGAC 7234
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||||| ||||| || || || ||||| || || || ||
Sbjct 7235 ACGATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAGCAG 7294
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || ||||||| |||||| ||
Sbjct 7295 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAACATC 7354
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 7355 CAGAAGGAGTCCACCCTCCACCTCGT 7380
>seq58611
Length=1931
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || || || || || ||||| ||||
Sbjct 1620 AAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGAGCTCGGACACGATCGAGAAC 1679
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||| ||||| ||||| || ||||| || || || || | || ||||||
Sbjct 1680 GTCAAGCAGAAGATCCAAGACAAGGAAGGCATCCCCCCTGATCAGCAGCGCCTCATCTTC 1739
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || ||||||| |||||| ||||||| |||||
Sbjct 1740 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCC 1799
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 1800 ACCCTCCACCTCGT 1813
>seq49680
Length=1134
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || |||||||| | || || || || || ||||| ||||
Sbjct 1028 AAGACCCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCGGACACGATCGAGAAC 969
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||| ||||| || || || || || || || || || | || ||||||
Sbjct 968 GTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAGCAGCGTCTCATCTTC 909
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || ||||||| |||||| ||||||| |||||
Sbjct 908 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCC 849
Query 206365 ACTCTTCACCTTGT 206378
|| |||||||| ||
Sbjct 848 ACCCTTCACCTCGT 835
>seq64879
Length=5350
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 92857 GCGGCCATGCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGA 92916
|| || | |||||| || |||||||| ||| ||| || | ||||| || ||||||||
Sbjct 4734 GCCGCGAGGCCAAAGTCGGAGACCTTGACGTTCCACTTGTTGTCGAGCAGTAGGTTGAGC 4675
Query 92917 GACTTGAGGTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCT 92976
||||||||||| | ||| ||||| |||| ||||| || ||||| ||||| || ||
Sbjct 4674 GACTTGAGGTCCCGGTGCACGATGTCAGACGAGTGGAGGAAGTGCATGCCCTTGGCGGCC 4615
Query 92977 TGG 92979
|||
Sbjct 4614 TGG 4612
>seq63440
Length=3144
Score = 86.0 bits (94), Expect = 1e-11
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
|||||||| || ||||| ||| ||| || | ||||| || |||||||| |||||||||
Sbjct 651 CCAAAATCCGACACCTTGACGTTCCACTTGTGGTCGAGCAGCAGGTTGAGCGACTTGAGG 592
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||| ||||| ||||| ||| |||
Sbjct 591 TCGCGGTGCACGATGCCCGACGAGTGGAGGAAGGCCATGCCCTTGGCCGCCTGGTAGGCC 532
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAG 93035
|||| || || || | || || || | | ||||||||||| ||
Sbjct 531 AGCTTGACCTTCAGTGCCAGCGGTATGGCTGTCACCAGCTCGTTGTGCAG 482
>seq62961
Length=1819
Score = 86.0 bits (94), Expect = 1e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || || ||||||||| ||| || | ||||| || |||||||| ||||||||
Sbjct 799 GCCAAAGTCCGACACCTTCACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAG 740
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGG 92979
||| | ||| ||||||| || || || || ||||| ||||| ||||| |||
Sbjct 739 GTCGCGGTGCACGATGCCTGACGAGTGCAGGAAGTGCATGCCCTTGGCCGCCTGG 685
>seq62844
Length=5660
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 92878 ACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCG 92937
||||| ||| ||| || |||||| || |||||||| ||||||||||| | ||| ||
Sbjct 935 ACCTTGACGTTCCACTTGGCGTCGAGCAGCAGGTTGAGCGACTTGAGGTCGCGGTGCACG 994
Query 92938 ATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCGAGCTGAACACAA 92997
||||| || || || || ||||||||||| ||||| ||| || | || ||
Sbjct 995 ATGCCCGACGAGTGCAGGAAGTGCATCCCCTTCGCCGCCTGGTACGCCATCTTCACTGTG 1054
Query 92998 AGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTG 93032
|| || | || || | |||||||||||||||||
Sbjct 1055 AGCTCCAGCGGTATGTCTGGAATGAGCTCGTTGTG 1089
>seq55627
Length=7213
Score = 86.0 bits (94), Expect = 1e-11
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
|||||||| || ||||| ||| ||| || | ||||| || |||||||| |||||||||
Sbjct 196 CCAAAATCCGACACCTTGACGTTCCACTTGTGGTCGAGCAGCAGGTTGAGCGACTTGAGG 255
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||| ||||| ||||| ||| |||
Sbjct 256 TCGCGGTGCACGATGCCCGACGAGTGGAGGAAGGCCATGCCCTTGGCCGCCTGGTAGGCC 315
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAG 93035
|||| || || || | || || || | | ||||||||||| ||
Sbjct 316 AGCTTGACCTTCAGTGCCAGCGGTATGGCTGTCACCAGCTCGTTGTGCAG 365
>seq55626
Length=1188
Score = 86.0 bits (94), Expect = 1e-11
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
|||||||| || ||||| ||| ||| || | ||||| || |||||||| |||||||||
Sbjct 196 CCAAAATCCGACACCTTGACGTTCCACTTGTGGTCGAGCAGCAGGTTGAGCGACTTGAGG 255
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||| ||||| ||||| ||| |||
Sbjct 256 TCGCGGTGCACGATGCCCGACGAGTGGAGGAAGGCCATGCCCTTGGCCGCCTGGTAGGCC 315
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAG 93035
|||| || || || | || || || | | ||||||||||| ||
Sbjct 316 AGCTTGACCTTCAGTGCCAGCGGTATGGCTGTCACCAGCTCGTTGTGCAG 365
>seq54035
Length=1910
Score = 86.0 bits (94), Expect = 1e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || || ||||||||| ||| || | ||||| || |||||||| ||||||||
Sbjct 1774 GCCAAAGTCCGACACCTTCACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAG 1833
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGG 92979
||| | ||| ||||||| || || || || ||||| ||||| ||||| |||
Sbjct 1834 GTCGCGGTGCACGATGCCTGACGAGTGCAGGAAGTGCATGCCCTTGGCCGCCTGG 1888
>seq53890
Length=1930
Score = 86.0 bits (94), Expect = 1e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || || ||||||||| ||| || | ||||| || |||||||| ||||||||
Sbjct 137 GCCAAAGTCCGACACCTTCACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAG 78
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGG 92979
||| | ||| ||||||| || || || || ||||| ||||| ||||| |||
Sbjct 77 GTCGCGGTGCACGATGCCTGACGAGTGCAGGAAGTGCATGCCCTTGGCCGCCTGG 23
>seq49559
Length=4415
Score = 86.0 bits (94), Expect = 1e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || || ||||||||| ||| || | ||||| || |||||||| ||||||||
Sbjct 3395 GCCAAAGTCCGACACCTTCACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAG 3336
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGG 92979
||| | ||| ||||||| || || || || ||||| ||||| ||||| |||
Sbjct 3335 GTCGCGGTGCACGATGCCTGACGAGTGCAGGAAGTGCATGCCCTTGGCCGCCTGG 3281
>seq48929
Length=2969
Score = 86.0 bits (94), Expect = 1e-11
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
|||||||| || ||||| ||| ||| || | ||||| || |||||||| |||||||||
Sbjct 2319 CCAAAATCCGACACCTTGACGTTCCACTTGTGGTCGAGCAGCAGGTTGAGCGACTTGAGG 2378
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||| ||||| ||||| ||| |||
Sbjct 2379 TCGCGGTGCACGATGCCCGACGAGTGGAGGAAGGCCATGCCCTTGGCCGCCTGGTAGGCC 2438
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAG 93035
|||| || || || | || || || | | ||||||||||| ||
Sbjct 2439 AGCTTGACCTTCAGTGCCAGCGGTATGGCTGTCACCAGCTCGTTGTGCAG 2488
>seq65788
Length=3562
Score = 84.2 bits (92), Expect = 5e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| | ||||| || |||
Sbjct 1001 CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCGAGCGAC 1060
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || ||| || ||| ||
Sbjct 1061 ACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAGCAG 1120
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || ||||||| |||||| ||
Sbjct 1121 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAACATC 1180
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 1181 CAGAAGGAGTCCACCCTCCACCTCGT 1206
>seq40702
Length=677
Score = 84.2 bits (92), Expect = 5e-11
Identities = 83/106 (78%), Gaps = 1/106 (1%)
Strand=Plus/Minus
Query 93032 GAAGG-ACTTCGTAGAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGA 93090
||||| || ||| ||||||| || || |||| || ||||| || |||||||| || ||
Sbjct 276 GAAGGTACGTCGAAGAGAGAGCCGAGGGCCATGTACTCCATGACGATGCACATCTTGGGT 217
Query 93091 GGCTTTGTACATGCTGCCATAAAGAGGATGACGTTCGGATGGCGCA 93136
||||| || ||||||||||| || || | ||||| ||||| ||||
Sbjct 216 GGCTTGGTGCATGCTGCCATGAACAGCACCACGTTGGGATGCCGCA 171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1180802752602593
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |