Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq34497 118 1e-21 >seq34497 Length=166879 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 146947 TGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACC 147006 ||||| || || || | ||||| || || || ||||| |||||||| || || |||||| Sbjct 40413 TGCGCATCGCCAAGCGAATGCACGAAATCGCCGGGCTTCAGGCCGGTGACCTGCGCCACC 40354 Query 147007 ATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCC 147066 || || ||||||| ||| || |||||||| || || || ||| | ||| | Sbjct 40353 ATCATTGTCAGCAGCGCATAGGACGCGATGTTGAACGGCACGCCGAGGAAGACATCCGCT 40294 Query 147067 GACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATG 147126 || | |||||| |||||||| || |||| || | ||| || |||||||| ||| | Sbjct 40293 GAACGCTGGTAGAGCTGGCAGGACAGCTTGCCCTTGGCGACATAAAACTGAAACAAGCAA 40234 Query 147127 TGGCACGGCGGCAGCGCCAT 147146 ||||| |||||||||||||| Sbjct 40233 TGGCAGGGCGGCAGCGCCAT 40214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582997629391200