Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq58101 215 6e-51 seq49189 215 6e-51 seq38874 215 6e-51 seq65323 131 2e-25 seq47653 96.9 4e-15 >seq58101 Length=8023 Score = 215 bits (238), Expect = 6e-51 Identities = 876/1361 (64%), Gaps = 36/1361 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 4356 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 4415 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||||| || | || ||||| ||| ||| | ||| || |||||| || Sbjct 4416 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 4475 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 ||||| || ||||| || || | | | | || |||||||| ||| || Sbjct 4476 GCCGAGCGATCAGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 4535 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || || ||||| || || || ||||| ||| |||| || | || || | | Sbjct 4536 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGAACCGAGCCGTTGTGCGAG 4595 Query 118077 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136 || | | ||| | || |||||||| || || | || || || || Sbjct 4596 ACGAGCTTGTTCTTGAGCGCCGGCGACCAGAGGCCGCGCTGCTGCAGCTCGCGCAGAAGG 4655 Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196 |||| ||||| || || || || |||||| |||| | ||||| ||||||||| Sbjct 4656 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 4715 Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 4716 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 4775 Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316 |||| ||| || ||| || ||||| | | ||| | ||| | | ||||| Sbjct 4776 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 4835 Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376 || | || | | | | | ||| | || |||||| | || |||||| Sbjct 4836 TCCCACCTGTCCGACGGCACGACTCCCCAGAGGTCGGGCTGGAGCTTGCCCATGGACGCG 4895 Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 118433 ||||| |||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 4896 GGCGAGCCCTCATAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCA 4952 Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTCGTC 118492 | ||||| ||||| || || || || || || ||| | || | | ||||||||| Sbjct 4953 ACCAGGGCGGCGTGGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCTCGTC 5011 Query 118493 GGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 118552 | || ||| | | || | || || || || || ||||| || || || | ||| Sbjct 5012 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCC 5071 Query 118553 AATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCCT 118609 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 5072 GATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGTTGAT 5128 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 118669 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 5129 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTG 5188 Query 118670 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729 || ||||| || | | ||| |||| || || |||| || ||||| || || Sbjct 5189 GTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 5242 Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789 ||| | ||| || ||||||| | | |||||||||| ||| || || Sbjct 5243 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 5302 Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849 |||||||| | || || || || ||||| ||| || || |||||||| |||||||| Sbjct 5303 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 5362 Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA---CATCGGCAGCTGG 118906 ||||| || ||||| | || |||| ||| || || ||| | | | ||| || | Sbjct 5363 GGGCGTGCCAGTCTCGATCTGAGACTCGAGGATGGCGAACCACAGCTCCTGGGC--CTTG 5420 Query 118907 CACA-GTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT-CT 118964 || | |||| || || ||||| | |||||| ||| | || |||| || Sbjct 5421 ACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCT 5478 Query 118965 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024 | ||||| | || | || || || || | | ||||| ||||| ||||| | || Sbjct 5479 TGCCCCAC-GAGTCAAACAGGCCGGGGGCTTCGTTGGGGCAAAAGAGCGACCAGTCGCCG 5537 Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCG 119083 ||| ||| || |||||||||||||| || || ||||| || |||| |||||||||| || Sbjct 5538 CCCATCTCCACGCGCTTCATGAAGAGATCGGGAATCCACAG-GCCGTAGAAGAGATCGCG 5596 Query 119084 ACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 119141 ||| | |||| || | || || || || || | ||||| | ||| ||| Sbjct 5597 --GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCC 5654 Query 119142 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 |||||||| || || ||||| | |||| | ||||| || Sbjct 5655 GCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 5695 Score = 122 bits (134), Expect = 1e-22 Identities = 242/354 (68%), Gaps = 6/354 (2%) Strand=Plus/Plus Query 119208 GCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267 |||||| |||| |||| || ||||| || |||| ||| | ||| ||| || || || Sbjct 5825 GCAGTGTCGTTGTATACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCG 5884 Query 119268 CGAAT--ACGAGACTTATTGGCTCTGACATCGTG-GATGTGCATACCAATACCCCCTGCC 119324 || || ||||| || ||| | || ||| | | | | || || || || ||| Sbjct 5885 CGGATGTACGAG--TTGGAGGCGCGGATGCGGTGCGCAGCG-AGGCCGATGCCGCCGGCC 5941 Query 119325 CACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 119384 |||| ||||| | || |||| | |||| | ||||||| || ||||||||||| || Sbjct 5942 GACTTGGAGATGAGGGCACACTGCTTGAGGGTATCGTAGATGCCCTCGATCGAGTCCTCC 6001 Query 119385 TTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGA 119444 || | | || |||||||| ||||| || || | || || || ||||||||||| Sbjct 6002 TTCATGGTGAGCAGGAAGCAAGACGACAGCTGCGGGCGCGGGGTTCCGGCGTTGAAGAGC 6061 Query 119445 GTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCG 119504 || || || |||||| |||| | || |||| |||||||||||| | |||||| Sbjct 6062 GTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCG 6121 Query 119505 GGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558 || |||| ||| ||| | |||| | || ||||| | ||||| |||||| Sbjct 6122 GGGATGTTGTCCTTGTGCAGGCCGACGGCCACGCGCATGAGCATGTGCTGGGGT 6175 >seq49189 Length=7476 Score = 215 bits (238), Expect = 6e-51 Identities = 876/1361 (64%), Gaps = 36/1361 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 5034 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 5093 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||||| || | || ||||| ||| ||| | ||| || |||||| || Sbjct 5094 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 5153 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 ||||| || ||||| || || | | | | || |||||||| ||| || Sbjct 5154 GCCGAGCGATCAGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 5213 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || || ||||| || || || ||||| ||| |||| || | || || | | Sbjct 5214 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGAACCGAGCCGTTGTGCGAG 5273 Query 118077 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136 || | | ||| | || |||||||| || || | || || || || Sbjct 5274 ACGAGCTTGTTCTTGAGCGCCGGCGACCAGAGGCCGCGCTGCTGCAGCTCGCGCAGAAGG 5333 Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196 |||| ||||| || || || || |||||| |||| | ||||| ||||||||| Sbjct 5334 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 5393 Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 5394 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 5453 Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316 |||| ||| || ||| || ||||| | | ||| | ||| | | ||||| Sbjct 5454 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 5513 Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376 || | || | | | | | ||| | || |||||| | || |||||| Sbjct 5514 TCCCACCTGTCCGACGGCACGACTCCCCAGAGGTCGGGCTGGAGCTTGCCCATGGACGCG 5573 Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 118433 ||||| |||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 5574 GGCGAGCCCTCATAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCA 5630 Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTCGTC 118492 | ||||| ||||| || || || || || || ||| | || | | ||||||||| Sbjct 5631 ACCAGGGCGGCGTGGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCTCGTC 5689 Query 118493 GGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 118552 | || ||| | | || | || || || || || ||||| || || || | ||| Sbjct 5690 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCC 5749 Query 118553 AATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCCT 118609 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 5750 GATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGTTGAT 5806 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 118669 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 5807 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTG 5866 Query 118670 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729 || ||||| || | | ||| |||| || || |||| || ||||| || || Sbjct 5867 GTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 5920 Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789 ||| | ||| || ||||||| | | |||||||||| ||| || || Sbjct 5921 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 5980 Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849 |||||||| | || || || || ||||| ||| || || |||||||| |||||||| Sbjct 5981 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 6040 Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA---CATCGGCAGCTGG 118906 ||||| || ||||| | || |||| ||| || || ||| | | | ||| || | Sbjct 6041 GGGCGTGCCAGTCTCGATCTGAGACTCGAGGATGGCGAACCACAGCTCCTGGGC--CTTG 6098 Query 118907 CACA-GTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT-CT 118964 || | |||| || || ||||| | |||||| ||| | || |||| || Sbjct 6099 ACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCT 6156 Query 118965 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024 | ||||| | || | || || || || | | ||||| ||||| ||||| | || Sbjct 6157 TGCCCCAC-GAGTCAAACAGGCCGGGGGCTTCGTTGGGGCAAAAGAGCGACCAGTCGCCG 6215 Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCG 119083 ||| ||| || |||||||||||||| || || ||||| || |||| |||||||||| || Sbjct 6216 CCCATCTCCACGCGCTTCATGAAGAGATCGGGAATCCACAG-GCCGTAGAAGAGATCGCG 6274 Query 119084 ACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 119141 ||| | |||| || | || || || || || | ||||| | ||| ||| Sbjct 6275 --GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCC 6332 Query 119142 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 |||||||| || || ||||| | |||| | ||||| || Sbjct 6333 GCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 6373 Score = 122 bits (134), Expect = 1e-22 Identities = 242/354 (68%), Gaps = 6/354 (2%) Strand=Plus/Plus Query 119208 GCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267 |||||| |||| |||| || ||||| || |||| ||| | ||| ||| || || || Sbjct 6503 GCAGTGTCGTTGTATACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCG 6562 Query 119268 CGAAT--ACGAGACTTATTGGCTCTGACATCGTG-GATGTGCATACCAATACCCCCTGCC 119324 || || ||||| || ||| | || ||| | | | | || || || || ||| Sbjct 6563 CGGATGTACGAG--TTGGAGGCGCGGATGCGGTGCGCAGCG-AGGCCGATGCCGCCGGCC 6619 Query 119325 CACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 119384 |||| ||||| | || |||| | |||| | ||||||| || ||||||||||| || Sbjct 6620 GACTTGGAGATGAGGGCACACTGCTTGAGGGTATCGTAGATGCCCTCGATCGAGTCCTCC 6679 Query 119385 TTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGA 119444 || | | || |||||||| ||||| || || | || || || ||||||||||| Sbjct 6680 TTCATGGTGAGCAGGAAGCAAGACGACAGCTGCGGGCGCGGGGTTCCGGCGTTGAAGAGC 6739 Query 119445 GTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCG 119504 || || || |||||| |||| | || |||| |||||||||||| | |||||| Sbjct 6740 GTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCG 6799 Query 119505 GGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558 || |||| ||| ||| | |||| | || ||||| | ||||| |||||| Sbjct 6800 GGGATGTTGTCCTTGTGCAGGCCGACGGCCACGCGCATGAGCATGTGCTGGGGT 6853 >seq38874 Length=7777 Score = 215 bits (238), Expect = 6e-51 Identities = 876/1361 (64%), Gaps = 36/1361 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 3422 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 3363 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||||| || | || ||||| ||| ||| | ||| || |||||| || Sbjct 3362 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 3303 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 ||||| || ||||| || || | | | | || |||||||| ||| || Sbjct 3302 GCCGAGCGATCAGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 3243 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || || ||||| || || || ||||| ||| |||| || | || || | | Sbjct 3242 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGAACCGAGCCGTTGTGCGAG 3183 Query 118077 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136 || | | ||| | || |||||||| || || | || || || || Sbjct 3182 ACGAGCTTGTTCTTGAGCGCCGGCGACCAGAGGCCGCGCTGCTGCAGCTCGCGCAGAAGG 3123 Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196 |||| ||||| || || || || |||||| |||| | ||||| ||||||||| Sbjct 3122 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 3063 Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 3062 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 3003 Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316 |||| ||| || ||| || ||||| | | ||| | ||| | | ||||| Sbjct 3002 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 2943 Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376 || | || | | | | | ||| | || |||||| | || |||||| Sbjct 2942 TCCCACCTGTCCGACGGCACGACTCCCCAGAGGTCGGGCTGGAGCTTGCCCATGGACGCG 2883 Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 118433 ||||| |||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 2882 GGCGAGCCCTCATAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCA 2826 Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTCGTC 118492 | ||||| ||||| || || || || || || ||| | || | | ||||||||| Sbjct 2825 ACCAGGGCGGCGTGGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCTCGTC 2767 Query 118493 GGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 118552 | || ||| | | || | || || || || || ||||| || || || | ||| Sbjct 2766 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCAATGCC 2707 Query 118553 AATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCCT 118609 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 2706 GATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGTTGAT 2650 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 118669 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 2649 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTGACGACGTCGTGCAGCTTCTTGTG 2590 Query 118670 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729 || ||||| || | | ||| |||| || || |||| || ||||| || || Sbjct 2589 GTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 2536 Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789 ||| | ||| || ||||||| | | |||||||||| ||| || || Sbjct 2535 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 2476 Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849 |||||||| | || || || || ||||| ||| || || |||||||| |||||||| Sbjct 2475 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 2416 Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA---CATCGGCAGCTGG 118906 ||||| || ||||| | || |||| ||| || || ||| | | | ||| || | Sbjct 2415 GGGCGTGCCAGTCTCGATCTGAGACTCGAGGATGGCGAACCACAGCTCCTGGGC--CTTG 2358 Query 118907 CACA-GTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT-CT 118964 || | |||| || || ||||| | |||||| ||| | || |||| || Sbjct 2357 ACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCT 2300 Query 118965 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024 | ||||| | || | || || || || | | ||||| ||||| ||||| | || Sbjct 2299 TGCCCCAC-GAGTCAAACAGGCCGGGGGCTTCGTTGGGGCAAAAGAGCGACCAGTCGCCG 2241 Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCG 119083 ||| ||| || |||||||||||||| || || ||||| || |||| |||||||||| || Sbjct 2240 CCCATCTCCACGCGCTTCATGAAGAGATCGGGAATCCACAG-GCCGTAGAAGAGATCGCG 2182 Query 119084 ACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 119141 ||| | |||| || | || || || || || | ||||| | ||| ||| Sbjct 2181 --GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCC 2124 Query 119142 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 |||||||| || || ||||| | |||| | ||||| || Sbjct 2123 GCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 2083 Score = 122 bits (134), Expect = 1e-22 Identities = 242/354 (68%), Gaps = 6/354 (2%) Strand=Plus/Minus Query 119208 GCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267 |||||| |||| |||| || ||||| || |||| ||| | ||| ||| || || || Sbjct 1953 GCAGTGTCGTTGTATACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCG 1894 Query 119268 CGAAT--ACGAGACTTATTGGCTCTGACATCGTG-GATGTGCATACCAATACCCCCTGCC 119324 || || ||||| || ||| | || ||| | | | | || || || || ||| Sbjct 1893 CGGATGTACGAG--TTGGAGGCGCGGATGCGGTGCGCAGCG-AGGCCGATGCCGCCGGCC 1837 Query 119325 CACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 119384 |||| ||||| | || |||| | |||| | ||||||| || ||||||||||| || Sbjct 1836 GACTTGGAGATGAGGGCACACTGCTTGAGGGTATCGTAGATGCCCTCGATCGAGTCCTCC 1777 Query 119385 TTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGA 119444 || | | || |||||||| ||||| || || | || || || ||||||||||| Sbjct 1776 TTCATGGTGAGCAGGAAGCAAGACGACAGCTGCGGGCGCGGGGTTCCGGCGTTGAAGAGC 1717 Query 119445 GTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCG 119504 || || || |||||| |||| | || |||| |||||||||||| | |||||| Sbjct 1716 GTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCG 1657 Query 119505 GGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558 || |||| ||| ||| | |||| | || ||||| | ||||| |||||| Sbjct 1656 GGGATGTTGTCCTTGTGCAGGCCGACGGCCACGCGCATGAGCATGTGCTGGGGT 1603 >seq65323 Length=85180 Score = 131 bits (144), Expect = 2e-25 Identities = 178/246 (72%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 ||||||||| ||| || |||||||| ||| |||||| || || |||||| || || Sbjct 60524 GGCAAACTCTGCGTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGCGAGGCC 60583 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||||||| || ||||| | |||||| || | ||| || ||||| ||||||||||| Sbjct 60584 GGGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAGAAGAT 60643 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG-CGGGA--CTTTGTATC 130191 ||||| || ||||| | | ||| ||||| ||||||| | || || || | | Sbjct 60644 GCCCTCGACGGCGGCGAATCCGACGAGGCGCTCGGCAAAGGTGTCGAGACCCTCCTTGTT 60703 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 130251 | |||| ||| ||||||| ||||| |||| | | || || |||| ||| || | Sbjct 60704 GATCCACCGCATGGCCCACTCGGCCTTCTTCTTCACCGAGGGCACCGTCTCGATGGCGTT 60763 Query 130252 AAAGAG 130257 |||||| Sbjct 60764 AAAGAG 60769 >seq47653 Length=11216 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 130033 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 130092 ||| ||||| || |||||| || || |||||| ||| || |||||||| || ||||| Sbjct 8258 ACCTTCGTCGCGACTGATGAGCTCGTTGGAGAAGGCCAGGCCGGGCATGAGGCCGCGCTT 8317 Query 130093 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 130152 ||| | |||||| || | || || || || ||||||||||| ||||| || ||||| Sbjct 8318 CTTGAGCCAGAAGATGGAGCAGAACGACCCGGAGAAGAAGATGCCCTCAACGGCGGCGAA 8377 Query 130153 CGCAAAGAGACGCTCAGCAAAGG--AGCGGGACTT-TGTATCAAACCACTTCATCGCCCA 130209 | | || |||| |||||| | ||| || | | |||||| | ||||| Sbjct 8378 TCCGACCAGGCGCTGGCCAAAGGTCTCTACGCCTTCGGTGGCGATCCACTTGAGAGCCCA 8437 Query 130210 CTGCGCCTTTTTCTCGATACACGGGACGGTCTGG 130243 | ||||| |||| |||| |||||| ||||||| Sbjct 8438 GTCGGCCTTCTTCTTGATAGACGGGATGGTCTGG 8471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617915459327480