Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq47568 91.5 1e-13 >seq47568 Length=2992 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/152 (76%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 52759 ACCCAGAGATGGGCGACAAGTTTGCGTCGTT-CACGGCGCAAAAGGG-GACGTG-CGGAG 52815 |||| | ||| || ||||||||||||||| ||||| ||||||||| | | || | || Sbjct 741 ACCCGGTGATCGGAGACAAGTTTGCGTCGAGGCACGG-GCAAAAGGGCGTCATGTCCCAG 683 Query 52816 CCGTCCTGACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCA 52875 | || | | |||||| ||||||||||| | || || || ||||||| |||||| Sbjct 682 CTGTG--GCCGCAGGAGAACATGCCCTTCAGCGAGTCGGGCATGTCGCCCGACGTCATCA 625 Query 52876 TCAACCCCCACGCCTTTCCCTCCAGGATGACC 52907 ||||||| |||||||| ||||| | |||||| Sbjct 624 TCAACCCGCACGCCTTCCCCTCGCGTATGACC 593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405977468369436