Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_028676.1 Length=149218 Score E Sequences producing significant alignments: (Bits) Value seq41976 136 4e-27 >seq41976 Length=13014 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 112673 CATGCCGAGAGCCTGGAGATAGGTGTCCAGGATAGCTTCCTGTTCCATGCGTTCATCAGC 112732 ||||||||| ||||| | ||||| |||||||| | |||||| ||| ||| || || || Sbjct 2453 CATGCCGAGCGCCTGCATGTAGGTTTCCAGGATGGTTTCCTGCTCCTGGCGCTCGTCGGC 2394 Query 112733 ATCCTGTCGACGAAGAGCAATGACCTTTCGGAGAATCTTCGTGTCGAAGCCCATCGACTT 112792 ||||| || | | |||| | || || | ||| ||||||||| | ||| Sbjct 2393 GTCCTGCTTGCGCATACGGATGATGGTGCGCAGCACCTTGACGTCGAAGCCGTTGCCCTT 2334 Query 112793 TGCTTCTCCGAAGACGTCCTTGATGTCATCGCCGATTGTCCGCTTCTCTTCTTCGAGGCG 112852 ||||| || |||||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct 2333 GGCTTCGCCATAGACGTCCTTGATGTCGTCGCTGATCGTCTTCTTCTCTTCCTCGAGGCG 2274 Query 112853 TTCGATACGCTCGATGAAAGCTCTCAGCTG 112882 |||||||||||||||| || | ||||| Sbjct 2273 CTCGATACGCTCGATGATGGCCTTGAGCTG 2244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476968412621040