Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq38237 109 2e-19 >seq38237 Length=22261 Score = 109 bits (120), Expect = 2e-19 Identities = 141/192 (73%), Gaps = 7/192 (4%) Strand=Plus/Plus Query 32332 TATTCCGCCTGTTCGGCTACGCCGGAACTGGCAAGACCACGCTGGCCCGGCACATCGCCG 32391 ||||||| ||||||||||| |||||||| ||||||||||||||||| ||||| ||||| | Sbjct 15660 TATTCCGGCTGTTCGGCTATGCCGGAACCGGCAAGACCACGCTGGCGCGGCATATCGCGG 15719 Query 32392 AGGGCATCGACGGCACCGTTCTCTTCGCCGCCCCGACCGGGAAGGCCGCCTACGTCCTGA 32451 | ||| || |||||| ||| |||||||| || || ||||| || ||| || Sbjct 15720 ACGGCGTCAACGGCAACGTGAAGTTCGCCGCTTTCACGGGCAAGGCGGCGCTGGTCATGC 15779 Query 32452 AGACGAAGGGCTGCCCGAACACCGGCACCATCCACCAGCTGATCTA---CACCC-CGAA- 32506 | ||||||||| ||| | ||| || || ||||||||| ||||| |||| Sbjct 15780 GCAACAAGGGCTGCGACAACGCTTCCACGATTCATTCGCTGATCTACCGCACCCGCGAAT 15839 Query 32507 --GGAGAAGAGC 32516 || ||||||| Sbjct 15840 CCGGCGAAGAGC 15851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191335117536640