Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq40481 87.8 5e-13 >seq40481 Length=47022 Score = 87.8 bits (96), Expect = 5e-13 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 31253 TTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACC 31312 ||||||| | ||| ||||||||||||| || ||| ||||||||||||| ||||||||| Sbjct 19537 TTGGCTGGGGCGGGAGGATTCGAACCTCCGCATGGGGGAATCAAAATCCCCTGCCTTACC 19596 Query 31313 GCTTGGCGACGGCGCAAAAGC 31333 |||||||||| | ||| ||| Sbjct 19597 ACTTGGCGACGCCCCAATAGC 19617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138088063520302