Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq65788 116 3e-21 seq48913 114 1e-20 seq63570 113 4e-20 seq41198 113 4e-20 seq57533 107 2e-18 seq66251 105 6e-18 seq64782 104 2e-17 seq54603 104 2e-17 seq37129 104 2e-17 seq65093 100 2e-16 seq43845 100 2e-16 seq42015 100 2e-16 seq49679 96.9 3e-15 seq37153 91.5 1e-13 seq49680 89.7 4e-13 >seq65788 Length=3562 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || ||||| Sbjct 373 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAA 314 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| ||||| |||| | Sbjct 313 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 254 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 253 CTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCAC 194 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 193 GAAGATCTGCAT 182 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1200 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 1141 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 1140 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 1081 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | || ||||||||||| || || | ||||| | || || ||| Sbjct 1080 TGCTTGACGTTCTCGATGGTGTCGCTCGACTCGACTTCGAGGGTGATGGTCTTGCCGGTC 1021 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1020 AGGGTCTTGACGAAGATCTGCAT 998 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 156 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 97 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | || ||| |||||| ||| ||| Sbjct 96 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 37 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 || || | || | | || ||||||||||| || Sbjct 36 TGCTTCACGTTCTCAATGGTGTCGCTCGACTCGAC 2 >seq48913 Length=4472 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 760 ATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTG 819 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || ||||||||||| |||| ||| | | ||| |||||| ||| || Sbjct 820 CTTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGGGATACCCTCCTTGTCCTGGATCTT 879 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 ||| || | || | | || ||||||||||| || || | ||||| | || || || Sbjct 880 CTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 939 Query 39261 CAGCGTTTTAACAAAGATTTGCATCTTT 39288 || || || || ||||| |||||| || Sbjct 940 GAGGGTCTTCACGAAGATCTGCATCGTT 967 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 533 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 592 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 593 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 652 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| ||| || || | ||||| | || || ||| Sbjct 653 TGCTTCACGTTCTCGATCGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTACCGGTC 712 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 713 AGGGTCTTGACGAAGATCTGCAT 735 >seq63570 Length=11955 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 6871 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 6812 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | | ||| |||||| ||| ||||| |||| | Sbjct 6811 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 6752 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || || || || || || Sbjct 6751 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 6692 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 6691 AAAGATCTGCAT 6680 >seq41198 Length=3949 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1452 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1393 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| || | || ||| |||||| ||| ||||| || | | Sbjct 1392 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1333 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || || || || || || Sbjct 1332 CTCGATGGTGTCGCTCGACTCGACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1273 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 1272 AAAGATCTGCAT 1261 >seq57533 Length=4825 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 2408 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 2467 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 2468 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 2527 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 2528 CTCGATGGTGTCGCTCGACTCGACCTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCAC 2587 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 2588 GAAGATCTGCAT 2599 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 3081 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGC 3140 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| || | ||| | | ||| |||||| ||| ||| Sbjct 3141 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 3200 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || || ||| Sbjct 3201 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 3260 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 3261 AGGGTCTTCACGAAGATCTGCAT 3283 >seq66251 Length=5749 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 3149 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 3090 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 3089 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 3030 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | || ||||| ||||| || || | || || | || || ||| Sbjct 3029 TGCTTGACGTTCTCGATGGTGTCGCTAGACTCGACCTCGAGGGTAATCGTCTTACCGGTC 2970 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 2969 AGGGTCTTCACGAAGATCTGCAT 2947 >seq64782 Length=5112 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 2527 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 2468 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || ||| |||||| ||| || || || | | Sbjct 2467 GATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 2408 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 2407 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 2348 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 2347 AAAGATCTGCAT 2336 >seq54603 Length=2606 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 2516 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2457 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | ||| | | ||| |||||| ||| ||||| || | | Sbjct 2456 GATGAGGCGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 2397 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 2396 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 2337 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 2336 GAAGATTTGCATGTT 2322 >seq37129 Length=1363 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1237 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1178 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | ||| | | ||| |||||| ||| ||||| || | | Sbjct 1177 GATGAGGCGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1118 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 1117 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1058 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 1057 GAAGATTTGCATGTT 1043 >seq65093 Length=7051 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 4714 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 4773 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || || |||||| ||| || || |||| | Sbjct 4774 GATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTT 4833 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | || || | || ||||| || || || || Sbjct 4834 CTCGATCGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCCGTGAGGGTCTTGAC 4893 Query 39273 AAAGATTTGC 39282 ||||| ||| Sbjct 4894 GAAGATCTGC 4903 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 4310 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 4369 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 4370 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 4429 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| ||| || || | ||||| | || || ||| Sbjct 4430 TGCTTCACGTTCTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCGGTC 4489 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 4490 AGGGTCTTGACGAAGATCTGCAT 4512 >seq43845 Length=2684 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2630 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 2571 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | || ||| |||||| || ||| Sbjct 2570 TTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 2511 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||||||||| || || | || || | || || || Sbjct 2510 TGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATCGTCTTGCCAGTG 2451 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 2450 AGGGTCTTCACGAAGATCTGCAT 2428 >seq42015 Length=1920 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 179 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 238 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| || | || | || ||| |||||| || ||| Sbjct 239 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTC 298 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | || ||||||||||| || || | ||||| | || || ||| Sbjct 299 TGCTTGACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 358 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 359 AGGGTCTTGACGAAGATCTGCAT 381 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || ||||| ||||| || || || ||||||||||| || | || | || ||| |||||| Sbjct 2 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 61 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| ||||| |||| || | | || ||||||||||| || || | || || | Sbjct 62 TGGATCTTCTGCTTGACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTC 121 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || || || ||||| ||||| Sbjct 122 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 153 >seq49679 Length=1067 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 860 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 919 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| || | || ||| |||||| ||| ||||| |||| | Sbjct 920 GATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 979 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | ||| || ||| ||| || || | ||||| | || || |||||||| || Sbjct 980 CTCGATCGTGTCCGAGCT---CTCGACTTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTT 1036 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 1037 GACGAAGATCTGCAT 1051 >seq37153 Length=844 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 501 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGC 442 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | || | || || |||||| ||| || Sbjct 441 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTT 382 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| |||||| || || | || || | || || ||| Sbjct 381 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTC 322 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 321 AGGGTCTTCACGAAGATCTGCAT 299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 273 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 214 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | || | || || |||||| ||| ||| Sbjct 213 TTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTC 154 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | || || ||| ||| || || | |||||| | || ||| Sbjct 153 TGCTTCACGTTCTCGATGGTGTCCGAGCT---CTCGACTTCGAGGGTGATAGTCTTGCCC 97 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| ||||| Sbjct 96 GTCAGGGTCTTGACGAAGATCTGCAT 71 >seq49680 Length=1134 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 841 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 900 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| || | ||| | || ||| |||||| ||| ||| Sbjct 901 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 960 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | ||| || ||| ||| || || | ||||| | || || Sbjct 961 TGCTTCACGTTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATCGTCTTACCG 1017 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| ||||| Sbjct 1018 GTCAGGGTCTTCACGAAGATCTGCAT 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429193629395729