Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015-
01-07] 67,233 sequences; 106,836,370 total letters
Query= NC_031107.1
Length=246291
Score E
Sequences producing significant alignments: (Bits) Value
seq34497 154 2e-32
seq42963 86.0 1e-11
>seq34497
Length=166879
Score = 154 bits (170), Expect = 2e-32
Identities = 183/247 (74%), Gaps = 1/247 (0%)
Strand=Plus/Plus
Query 201841 AAAAG-CCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTA 201899
||||| ||||||| ||||| || || || || || || ||||| | |||||||| ||||
Sbjct 39843 AAAAGACCGACCGCACCGGGACCGGAACGCTGTCCGTGTTCGGCCATCAGATGCGGTTTA 39902
Query 201900 ACTTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCC 201959
| | ||||| ||| || | |||||||| ||| |||| || || ||| |||
Sbjct 39903 ATCTGGCGTCGGGTTTCCCGATGCTGACCACCAAGAAGCTTCATCTGAAATCGATCGTCC 39962
Query 201960 ATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACG 202019
|||| ||||||||||| || ||| |||||||| ||| |||| ||||| |||||| ||
Sbjct 39963 ATGAACTGCTGTGGTTTCTGGCGGGCGACACCAATATCAAGTACTTGAACGACAACGGCG 40022
Query 202020 TCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGC 202079
|| ||||||||| || |||||||| ||||||| | | ||||| || ||||| ||
Sbjct 40023 TCCGCATCTGGGATGAGTGGGCGGACGAAAACGGCAATCTCGGCCCCGTTTACGGATCGC 40082
Query 202080 AATGGCG 202086
| |||||
Sbjct 40083 AGTGGCG 40089
>seq42963
Length=10355
Score = 86.0 bits (94), Expect = 1e-11
Identities = 55/60 (92%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 4030 CTCGTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089
|| |||||||||||||||||||||| ||| ||||||||| |||||||| |||||||||||
Sbjct 2659 CTTGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAGTCT 2718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787340952260680
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |