Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq36931 141 3e-29 >seq36931 Length=650932 Score = 141 bits (156), Expect = 3e-29 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 31335 GGTGCCCACTCGCCCCATTGCTTGAATAGGAACGGCACGCCGGCGGCTGCGCACTGGTCG 31394 || ||||||||||||||||||||||| | |||||||||| |||||| ||||| ||| Sbjct 422054 GGGGCCCACTCGCCCCATTGCTTGAAGAAGAACGGCACGTTGGCGGCGTGACACTGATCG 421995 Query 31395 CGCAGCGAGCGAGCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCG 31454 |||||||| || ||||| ||||||||||| | || || | ||||||||||||||||| Sbjct 421994 CGCAGCGATCGCGCCCAATCGGGATGCATTGATCGCGCCTCACGGCCGCTTTCGCCGCCG 421935 Query 31455 GCGATCACCCAAT 31467 || |||||||||| Sbjct 421934 GCAATCACCCAAT 421922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170556999286340