Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq54032 87.8 4e-13 >seq54032 Length=526453 Score = 87.8 bits (96), Expect = 4e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||| |||||||||||||||||||| | ||||||||||| | ||||||||| Sbjct 490986 TGGTGGGTCCAGAAGGATTCGAACCTTCGACACCCTGATTAAAAGTCAGGTGCTCTACCA 491045 Query 418 ACTGAGCTAACGACCC 433 ||||||||| ||||| Sbjct 491046 ACTGAGCTATGGACCC 491061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100636144511880