Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq47808 179 5e-40 seq47532 179 5e-40 seq38762 179 5e-40 seq38761 179 5e-40 seq42602 167 3e-36 seq38368 167 3e-36 seq38367 167 3e-36 seq30353 167 3e-36 >seq47808 Length=3094 Score = 179 bits (198), Expect = 5e-40 Identities = 405/594 (68%), Gaps = 30/594 (5%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||| ||||| Sbjct 1030 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCTTCCTTC 971 Query 125055 TGGACGGTCGAAGAGGTCGATCTG---TCCAAGGACCTGTACGATTGGGAGACTCGTTTG 125111 ||||| | |||||| ||||||||| ||| ||| || | | ||||| ||| | Sbjct 970 TGGACTGCCGAAGAAGTCGATCTGAGTTCC---GACATGAAGCACTGGGAA--TCGCTCA 916 Query 125112 ACTGAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGA 125167 || ||| || |||||| || || |||| | |||||||||| |||| | ||| Sbjct 915 AC---AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGCCGCCAGCGA 861 Query 125168 TGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGG 125226 || ||||| || || || | | | || ||| | ||| || | || |||| Sbjct 860 CGGTATCGTGGCTGAGAACCTCGCCGGC-CGCTTCATGAAGGAGGTGCAGGTGCCCGAGG 802 Query 125227 TGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTA 125286 | ||||| ||||| ||||| ||| || |||||| | ||||| || |||||||| Sbjct 801 CGCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGC 742 Query 125287 CACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATC 125345 || || |||| ||| | ||| || || ||| || ||||| ||| ||| Sbjct 741 TCCTCATCGACACCTACGTCAAGGATTCGGT-CGAAAAGGACCGCCTCTTCCGCGCCATC 683 Query 125346 GACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC 125405 || || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 682 GAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAG 623 Query 125406 AAGTCTTCG-----TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 | | ||| | |||||| | || | | ||| |||||||| ||||||||||||| Sbjct 622 --GGCGTCGAGACCTTCGCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCT 565 Query 125461 TTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTG 125519 | || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 564 TCTCCGGCAGCTTCTGCT-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTC 506 Query 125520 ACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || ||||||||||| ||||| ||||| ||| Sbjct 505 GCCTTCAGTAACGAGATGATCAGCCGCGACGAGGGCCTCCACTGCGACTTCGCC 452 >seq47532 Length=3156 Score = 179 bits (198), Expect = 5e-40 Identities = 405/594 (68%), Gaps = 30/594 (5%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||| ||||| Sbjct 2127 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCTTCCTTC 2186 Query 125055 TGGACGGTCGAAGAGGTCGATCTG---TCCAAGGACCTGTACGATTGGGAGACTCGTTTG 125111 ||||| | |||||| ||||||||| ||| ||| || | | ||||| ||| | Sbjct 2187 TGGACTGCCGAAGAAGTCGATCTGAGTTCC---GACATGAAGCACTGGGAA--TCGCTCA 2241 Query 125112 ACTGAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGA 125167 || ||| || |||||| || || |||| | |||||||||| |||| | ||| Sbjct 2242 AC---AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGCCGCCAGCGA 2296 Query 125168 TGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGG 125226 || ||||| || || || | | | || ||| | ||| || | || |||| Sbjct 2297 CGGTATCGTGGCTGAGAACCTCGCCGGC-CGCTTCATGAAGGAGGTGCAGGTGCCCGAGG 2355 Query 125227 TGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTA 125286 | ||||| ||||| ||||| ||| || |||||| | ||||| || |||||||| Sbjct 2356 CGCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGC 2415 Query 125287 CACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATC 125345 || || |||| ||| | ||| || || ||| || ||||| ||| ||| Sbjct 2416 TCCTCATCGACACCTACGTCAAGGATTCGGT-CGAAAAGGACCGCCTCTTCCGCGCCATC 2474 Query 125346 GACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC 125405 || || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 2475 GAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAG 2534 Query 125406 AAGTCTTCG-----TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 | | ||| | |||||| | || | | ||| |||||||| ||||||||||||| Sbjct 2535 --GGCGTCGAGACCTTCGCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCT 2592 Query 125461 TTTCGGGTAG-TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTG 125519 | || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 2593 TCTCCGGCAGCTTCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTC 2651 Query 125520 ACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || ||||||||||| ||||| ||||| ||| Sbjct 2652 GCCTTCAGTAACGAGATGATCAGCCGCGACGAGGGCCTCCACTGCGACTTCGCC 2705 >seq38762 Length=2104 Score = 179 bits (198), Expect = 5e-40 Identities = 405/594 (68%), Gaps = 30/594 (5%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||| ||||| Sbjct 1861 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCTTCCTTC 1802 Query 125055 TGGACGGTCGAAGAGGTCGATCTG---TCCAAGGACCTGTACGATTGGGAGACTCGTTTG 125111 ||||| | |||||| ||||||||| ||| ||| || | | ||||| ||| | Sbjct 1801 TGGACTGCCGAAGAAGTCGATCTGAGTTCC---GACATGAAGCACTGGGAA--TCGCTCA 1747 Query 125112 ACTGAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGA 125167 || ||| || |||||| || || |||| | |||||||||| |||| | ||| Sbjct 1746 AC---AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGCCGCCAGCGA 1692 Query 125168 TGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGG 125226 || ||||| || || || | | | || ||| | ||| || | || |||| Sbjct 1691 CGGTATCGTGGCTGAGAACCTCGCCGGC-CGCTTCATGAAGGAGGTGCAGGTGCCCGAGG 1633 Query 125227 TGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTA 125286 | ||||| ||||| ||||| ||| || |||||| | ||||| || |||||||| Sbjct 1632 CGCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGC 1573 Query 125287 CACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATC 125345 || || |||| ||| | ||| || || ||| || ||||| ||| ||| Sbjct 1572 TCCTCATCGACACCTACGTCAAGGATTCGGT-CGAAAAGGACCGCCTCTTCCGCGCCATC 1514 Query 125346 GACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC 125405 || || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 1513 GAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAG 1454 Query 125406 AAGTCTTCG-----TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 | | ||| | |||||| | || | | ||| |||||||| ||||||||||||| Sbjct 1453 --GGCGTCGAGACCTTCGCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCT 1396 Query 125461 TTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTG 125519 | || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 1395 TCTCCGGCAGCTTCTGCT-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTC 1337 Query 125520 ACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || ||||||||||| ||||| ||||| ||| Sbjct 1336 GCCTTCAGTAACGAGATGATCAGCCGCGACGAGGGCCTCCACTGCGACTTCGCC 1283 >seq38761 Length=2091 Score = 179 bits (198), Expect = 5e-40 Identities = 405/594 (68%), Gaps = 30/594 (5%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||| ||||| Sbjct 1848 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCTTCCTTC 1789 Query 125055 TGGACGGTCGAAGAGGTCGATCTG---TCCAAGGACCTGTACGATTGGGAGACTCGTTTG 125111 ||||| | |||||| ||||||||| ||| ||| || | | ||||| ||| | Sbjct 1788 TGGACTGCCGAAGAAGTCGATCTGAGTTCC---GACATGAAGCACTGGGAA--TCGCTCA 1734 Query 125112 ACTGAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGA 125167 || ||| || |||||| || || |||| | |||||||||| |||| | ||| Sbjct 1733 AC---AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGCCGCCAGCGA 1679 Query 125168 TGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGG 125226 || ||||| || || || | | | || ||| | ||| || | || |||| Sbjct 1678 CGGTATCGTGGCTGAGAACCTCGCCGGC-CGCTTCATGAAGGAGGTGCAGGTGCCCGAGG 1620 Query 125227 TGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTA 125286 | ||||| ||||| ||||| ||| || |||||| | ||||| || |||||||| Sbjct 1619 CGCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGC 1560 Query 125287 CACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATC 125345 || || |||| ||| | ||| || || ||| || ||||| ||| ||| Sbjct 1559 TCCTCATCGACACCTACGTCAAGGATTCGGT-CGAAAAGGACCGCCTCTTCCGCGCCATC 1501 Query 125346 GACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC 125405 || || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 1500 GAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAG 1441 Query 125406 AAGTCTTCG-----TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 | | ||| | |||||| | || | | ||| |||||||| ||||||||||||| Sbjct 1440 --GGCGTCGAGACCTTCGCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCT 1383 Query 125461 TTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTG 125519 | || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 1382 TCTCCGGCAGCTTCTGCT-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTC 1324 Query 125520 ACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || ||||||||||| ||||| ||||| ||| Sbjct 1323 GCCTTCAGTAACGAGATGATCAGCCGCGACGAGGGCCTCCACTGCGACTTCGCC 1270 >seq42602 Length=5458 Score = 167 bits (184), Expect = 3e-36 Identities = 327/482 (68%), Gaps = 6/482 (1%) Strand=Plus/Minus Query 96897 GGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATG 96956 ||||| | ||| ||||| | || || |||||||||||| |||||||||| |||| || Sbjct 4880 GGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTCGACCTG 4821 Query 96957 CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTG 97016 || ||| ||| || ||| || ||| | || | || || | || ||| | Sbjct 4820 AAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTGTGGATT 4761 Query 97017 CCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGAC 97076 || || | ||||||| |||||| | || ||| ||||| || | |||||| || Sbjct 4760 CCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGCCCCAAC 4701 Query 97077 TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTAC 97136 | | |||||||||| || | |||||| | ||||| |||| |||||| | |||| Sbjct 4700 GAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAGCGCTAC 4641 Query 97137 GAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCATC 97193 ||||| |||||||| || | | || ||| | || | || |||||| |||||| Sbjct 4640 GAGCAGGAGGGCCG---CGCGCGCCGCGTGGTCAAGGCCCAGGAGCTGTGGTTCGCCATC 4584 Query 97194 GTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGC 97253 | | | ||| | ||||| || || || ||||| || |||||||| || || || Sbjct 4583 CTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACGGC 4524 Query 97254 AACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTA 97313 || |||||| | ||| | ||||||||| || || || ||||||||||| | || Sbjct 4523 AAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGAGGTCGTC 4464 Query 97314 GAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAG 97373 ||||| | || || |||||| ||| || ||| || || ||| || ||||||||| Sbjct 4463 CAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCTGCCCAAG 4404 Query 97374 TT 97375 || Sbjct 4403 TT 4402 Score = 96.9 bits (106), Expect = 5e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 98038 TCTACAAGACTGTCTGGGAGATTCCG-ACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 |||||||||| || |||||||| ||| | | | | | ||||| ||||| ||||| | Sbjct 3730 TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTCA-TCATCGACATGGCCGCCGATCGC 3672 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 | |||||| |||||||| || ||| |||| | ||| | | ||||||| | | | Sbjct 3671 TCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTCGCC 3612 Query 98157 CGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTAT 98216 | || || || ||||| ||||| ||| ||||||||||||||| ||||||||||| Sbjct 3611 AAGCTCACCTCCATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTAC 3552 Query 98217 CT 98218 || Sbjct 3551 CT 3550 >seq38368 Length=5470 Score = 167 bits (184), Expect = 3e-36 Identities = 327/482 (68%), Gaps = 6/482 (1%) Strand=Plus/Plus Query 96897 GGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATG 96956 ||||| | ||| ||||| | || || |||||||||||| |||||||||| |||| || Sbjct 579 GGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTCGACCTG 638 Query 96957 CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTG 97016 || ||| ||| || ||| || ||| | || | || || | || ||| | Sbjct 639 AAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTGTGGATT 698 Query 97017 CCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGAC 97076 || || | ||||||| |||||| | || ||| ||||| || | |||||| || Sbjct 699 CCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGCCCCAAC 758 Query 97077 TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTAC 97136 | | |||||||||| || | |||||| | ||||| |||| |||||| | |||| Sbjct 759 GAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAGCGCTAC 818 Query 97137 GAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCATC 97193 ||||| |||||||| || | | || ||| | || | || |||||| |||||| Sbjct 819 GAGCAGGAGGGCCG---CGCGCGCCGCGTGGTCAAGGCCCAGGAGCTGTGGTTCGCCATC 875 Query 97194 GTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGC 97253 | | | ||| | ||||| || || || ||||| || |||||||| || || || Sbjct 876 CTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACGGC 935 Query 97254 AACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTA 97313 || |||||| | ||| | ||||||||| || || || ||||||||||| | || Sbjct 936 AAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGAGGTCGTC 995 Query 97314 GAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAG 97373 ||||| | || || |||||| ||| || ||| || || ||| || ||||||||| Sbjct 996 CAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCTGCCCAAG 1055 Query 97374 TT 97375 || Sbjct 1056 TT 1057 Score = 96.9 bits (106), Expect = 5e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 98038 TCTACAAGACTGTCTGGGAGATTCCG-ACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 |||||||||| || |||||||| ||| | | | | | ||||| ||||| ||||| | Sbjct 1729 TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTCA-TCATCGACATGGCCGCCGATCGC 1787 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 | |||||| |||||||| || ||| |||| | ||| | | ||||||| | | | Sbjct 1788 TCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTCGCC 1847 Query 98157 CGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTAT 98216 | || || || ||||| ||||| ||| ||||||||||||||| ||||||||||| Sbjct 1848 AAGCTCACCTCCATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTAC 1907 Query 98217 CT 98218 || Sbjct 1908 CT 1909 >seq38367 Length=4245 Score = 167 bits (184), Expect = 3e-36 Identities = 327/482 (68%), Gaps = 6/482 (1%) Strand=Plus/Minus Query 96897 GGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATG 96956 ||||| | ||| ||||| | || || |||||||||||| |||||||||| |||| || Sbjct 2478 GGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTCGACCTG 2419 Query 96957 CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTG 97016 || ||| ||| || ||| || ||| | || | || || | || ||| | Sbjct 2418 AAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTGTGGATT 2359 Query 97017 CCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGAC 97076 || || | ||||||| |||||| | || ||| ||||| || | |||||| || Sbjct 2358 CCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGCCCCAAC 2299 Query 97077 TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTAC 97136 | | |||||||||| || | |||||| | ||||| |||| |||||| | |||| Sbjct 2298 GAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAGCGCTAC 2239 Query 97137 GAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCATC 97193 ||||| |||||||| || | | || ||| | || | || |||||| |||||| Sbjct 2238 GAGCAGGAGGGCCG---CGCGCGCCGCGTGGTCAAGGCCCAGGAGCTGTGGTTCGCCATC 2182 Query 97194 GTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGC 97253 | | | ||| | ||||| || || || ||||| || |||||||| || || || Sbjct 2181 CTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACGGC 2122 Query 97254 AACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTA 97313 || |||||| | ||| | ||||||||| || || || ||||||||||| | || Sbjct 2121 AAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGAGGTCGTC 2062 Query 97314 GAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAG 97373 ||||| | || || |||||| ||| || ||| || || ||| || ||||||||| Sbjct 2061 CAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCTGCCCAAG 2002 Query 97374 TT 97375 || Sbjct 2001 TT 2000 Score = 96.9 bits (106), Expect = 5e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 98038 TCTACAAGACTGTCTGGGAGATTCCG-ACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 |||||||||| || |||||||| ||| | | | | | ||||| ||||| ||||| | Sbjct 1328 TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTCA-TCATCGACATGGCCGCCGATCGC 1270 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 | |||||| |||||||| || ||| |||| | ||| | | ||||||| | | | Sbjct 1269 TCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTCGCC 1210 Query 98157 CGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTAT 98216 | || || || ||||| ||||| ||| ||||||||||||||| ||||||||||| Sbjct 1209 AAGCTCACCTCCATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTAC 1150 Query 98217 CT 98218 || Sbjct 1149 CT 1148 >seq30353 Length=5073 Score = 167 bits (184), Expect = 3e-36 Identities = 327/482 (68%), Gaps = 6/482 (1%) Strand=Plus/Plus Query 96897 GGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATG 96956 ||||| | ||| ||||| | || || |||||||||||| |||||||||| |||| || Sbjct 2596 GGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTCGACCTG 2655 Query 96957 CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTG 97016 || ||| ||| || ||| || ||| | || | || || | || ||| | Sbjct 2656 AAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTGTGGATT 2715 Query 97017 CCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGAC 97076 || || | ||||||| |||||| | || ||| ||||| || | |||||| || Sbjct 2716 CCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGCCCCAAC 2775 Query 97077 TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTAC 97136 | | |||||||||| || | |||||| | ||||| |||| |||||| | |||| Sbjct 2776 GAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAGCGCTAC 2835 Query 97137 GAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCATC 97193 ||||| |||||||| || | | || ||| | || | || |||||| |||||| Sbjct 2836 GAGCAGGAGGGCCG---CGCGCGCCGCGTGGTCAAGGCCCAGGAGCTGTGGTTCGCCATC 2892 Query 97194 GTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGC 97253 | | | ||| | ||||| || || || ||||| || |||||||| || || || Sbjct 2893 CTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACGGC 2952 Query 97254 AACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTA 97313 || |||||| | ||| | ||||||||| || || || ||||||||||| | || Sbjct 2953 AAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGAGGTCGTC 3012 Query 97314 GAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAG 97373 ||||| | || || |||||| ||| || ||| || || ||| || ||||||||| Sbjct 3013 CAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCTGCCCAAG 3072 Query 97374 TT 97375 || Sbjct 3073 TT 3074 Score = 96.9 bits (106), Expect = 5e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 98038 TCTACAAGACTGTCTGGGAGATTCCG-ACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 |||||||||| || |||||||| ||| | | | | | ||||| ||||| ||||| | Sbjct 3746 TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTCA-TCATCGACATGGCCGCCGATCGC 3804 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 | |||||| |||||||| || ||| |||| | ||| | | ||||||| | | | Sbjct 3805 TCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTCGCC 3864 Query 98157 CGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTAT 98216 | || || || ||||| ||||| ||| ||||||||||||||| ||||||||||| Sbjct 3865 AAGCTCACCTCCATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTAC 3924 Query 98217 CT 98218 || Sbjct 3925 CT 3926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740533585235920