Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq55384 95.1 1e-14 seq28762 95.1 1e-14 seq25327 95.1 1e-14 >seq55384 Length=1775 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 99555 CGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGCTGCGG 99614 || || |||||| ||||| |||||||| ||||||| | ||||||||||| | || Sbjct 1630 CGTGGCGTTGAGGAGCAGTACGCCGCGCTGCGCCCACTCGGTGAGGCAGCCGTGGTTGGG 1571 Query 99615 CCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGG 99674 ||| | ||||||| | | || | | |||||||| |||| |||| |||||| Sbjct 1570 GCGCCGCCAGCCGGGGATGCTGCGCTCGAGCTCGGCGTAGATCTTCTTGAGGGAGGGCGG 1511 Query 99675 GATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTA 99734 | || ||||| | | |||| ||||| |||||||||||||| | || ||| Sbjct 1510 CACCGCCACGCCCCTGGTCACTGAGAAGGAGAGGCCGTGGGCCTGGTTCTCATTGAAGTA 1451 Query 99735 GGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 || ||||| |||||||| || ||||| || Sbjct 1450 CGGATCCTGCCCCAGGATCACCACCTTCAC 1421 >seq28762 Length=568 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 99555 CGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGCTGCGG 99614 || || |||||| ||||| |||||||| ||||||| | ||||||||||| | || Sbjct 356 CGTGGCGTTGAGGAGCAGTACGCCGCGCTGCGCCCACTCGGTGAGGCAGCCGTGGTTGGG 415 Query 99615 CCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGG 99674 ||| | ||||||| | | || | | |||||||| |||| |||| |||||| Sbjct 416 GCGCCGCCAGCCGGGGATGCTGCGCTCGAGCTCGGCGTAGATCTTCTTGAGGGAGGGCGG 475 Query 99675 GATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTA 99734 | || ||||| | | |||| ||||| |||||||||||||| | || ||| Sbjct 476 CACCGCCACGCCCCTGGTCACTGAGAAGGAGAGGCCGTGGGCCTGGTTCTCATTGAAGTA 535 Query 99735 GGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 || ||||| |||||||| || ||||| || Sbjct 536 CGGATCCTGCCCCAGGATCACCACCTTCAC 565 >seq25327 Length=1644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 99555 CGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGCTGCGG 99614 || || |||||| ||||| |||||||| ||||||| | ||||||||||| | || Sbjct 1499 CGTGGCGTTGAGGAGCAGTACGCCGCGCTGCGCCCACTCGGTGAGGCAGCCGTGGTTGGG 1440 Query 99615 CCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGG 99674 ||| | ||||||| | | || | | |||||||| |||| |||| |||||| Sbjct 1439 GCGCCGCCAGCCGGGGATGCTGCGCTCGAGCTCGGCGTAGATCTTCTTGAGGGAGGGCGG 1380 Query 99675 GATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTA 99734 | || ||||| | | |||| ||||| |||||||||||||| | || ||| Sbjct 1379 CACCGCCACGCCCCTGGTCACTGAGAAGGAGAGGCCGTGGGCCTGGTTCTCATTGAAGTA 1320 Query 99735 GGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 || ||||| |||||||| || ||||| || Sbjct 1319 CGGATCCTGCCCCAGGATCACCACCTTCAC 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440586481219920