Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq36931 120 1e-22 >seq36931 Length=650932 Score = 120 bits (132), Expect = 1e-22 Identities = 101/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 30873 TCACCCCATTGCTTGAACAGGAACGGCACATCTGCGGCAGCGCACTGGTCGCGCAGCGAC 30932 || |||||||||||||| | ||||||||| | ||||| ||||| ||||||||||| Sbjct 422045 TCGCCCCATTGCTTGAAGAAGAACGGCACGTTGGCGGCGTGACACTGATCGCGCAGCGAT 421986 Query 30933 CGAGCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCGGCGATCACC 30992 || ||||| ||||||||||| | || || | ||||||||||||||||||| |||||| Sbjct 421985 CGCGCCCAATCGGGATGCATTGATCGCGCCTCACGGCCGCTTTCGCCGCCGGCAATCACC 421926 Query 30993 CAAT 30996 |||| Sbjct 421925 CAAT 421922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175328182241908