Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq27656 91.5 1e-13 >seq27656 Length=1108 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/152 (76%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTT 71477 |||||| | ||||| |||||||| ||||||||||||| ||||||| || || || Sbjct 969 GGTCATACGCGAGGGGAAGGCGTGCGGGTTGATGATGACGTCGGGCGACATGCCCGACTC 910 Query 71478 GTCGAAGGGCATGTCCTCCTGGGTCAGGACAGCTCCG-CATGTC-CCCTTTTGCGCCGTG 71535 | ||||||||||| |||||| | | |||||| | |||| | ||||| ||| ||||| Sbjct 909 GCTGAAGGGCATGTTCTCCTGCGGC--CACAGCTGGGACATGACGCCCTTCTGC-CCGTG 853 Query 71536 AAT-GACGCAAACTTGTCGCCCATCTCTGGGT 71566 | ||||| |||||||| || ||| | |||| Sbjct 852 CCTCGACGCGAACTTGTCTCCGATCACCGGGT 821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338530529531568