Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq27440 82.4 9e-11 >seq27440 Length=426762 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 40716 ATCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCGTGTCACTGT 40775 ||||| || || ||||| || | || | || || ||||| ||| ||||| || || Sbjct 329210 ATCGTCTCGGCGTGGAATCCGGCCGAGGTCGACAAGATGGCGCTGCCGCCGTGCCATTGC 329269 Query 40776 TTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCGGTT 40835 | ||||||||| ||| |||||| || ||||| ||| |||||||| || | Sbjct 329270 CTGTTCCAGTTCTACGTCGCCAACGGCAAGCTGTCCTGTCAGCTCTATCAGCGCTCCGCC 329329 Query 40836 GATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGAC 40885 || |||||| | || |||| ||||| |||||||||||| | || || || Sbjct 329330 GACGTCTTCCTCGGCGTGCCCTTCAACATCGCCTCCTACTCGCTGCTCAC 329379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577062413547200