Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq46263 176 2e-38 >seq46263 Length=68285 Score = 176 bits (194), Expect = 2e-38 Identities = 247/344 (72%), Gaps = 11/344 (3%) Strand=Plus/Plus Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 ||| |||||| || ||||||||||| || || ||| | ||| || ||||| | Sbjct 44146 ATGATTCTTAAGAAGATGAAAGAAACGGCTGAGGCTTATTTGGGTGAGCCCGTTACGCAA 44205 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| ||||||||||| ||||| || ||||| | ||||| || ||||| || ||||| Sbjct 44206 GCAGTTATTACTGTTCCTGCTTACTTTAATGACTCTCAACGTCAGGCAACAAAGGATGCG 44265 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || ||||| ||| || | || | || |||||||| || || |||||||||||||| Sbjct 44266 GGGCAGATTGCAGGTCTAGAAGTATTACGTATTATTAACGAGCCAACAGCAGCTGCTCTG 44325 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || ||||| || | || ||| ||| | | | ||| | || | || | Sbjct 44326 GCTTATGGGCTTGAGAA---AAAGGAATCCG------GTACCATTGTGGTTTACGACCTG 44376 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAG 451561 ||||| || || ||| |||||| ||| ||||| |||||| || |||||||| || Sbjct 44377 GGTGGTGGTACGTTTGACGTTTCTGTCCTTGAAATTGGAGATGGTGTTTTTGAAGTTAAA 44436 Query 451562 GCAACCAATGGTGATACTCATC-TAGGAGGTGAAGATATTGATA 451604 |||||||||||||||| | || |||| ||||||||| | |||| Sbjct 44437 TCAACCAATGGTGATAC-CTTCTTAGGCGGTGAAGATTTCGATA 44479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974282039140136