Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq46263 329 2e-84 seq52729 102 6e-16 seq51164 102 6e-16 seq47927 102 6e-16 seq31956 102 6e-16 seq52665 98.7 8e-15 seq49583 98.7 8e-15 seq37318 98.7 8e-15 seq25576 98.7 8e-15 seq53816 96.9 3e-14 seq51936 96.9 3e-14 seq37797 96.9 3e-14 seq25075 96.9 3e-14 seq56432 93.3 3e-13 seq54098 91.5 1e-12 seq53982 89.7 4e-12 seq52517 87.8 1e-11 seq36620 87.8 1e-11 seq33929 87.8 1e-11 seq47133 86.0 5e-11 seq39864 86.0 5e-11 seq30838 86.0 5e-11 seq27521 86.0 5e-11 >seq46263 Length=68285 Score = 329 bits (364), Expect = 2e-84 Identities = 326/420 (78%), Gaps = 4/420 (1%) Strand=Plus/Plus Query 36073 GATTTT-ACAGTGTCTAAAGATTTTTTAAGAAGTGATATGTGTGGTATATTATAATAAGA 36131 |||||| ||| | ||||||||||||||||||| ||| | | |||||||| ||| Sbjct 54017 GATTTTCACAACTTTTAAAGATTTTTTAAGAAGTTATA---GCGCCATATTATAGTAATC 54073 Query 36132 CTTCATGGAAAAGAGCCACTCTTCAGGCCAGAAAGATCCTTGATTCATTAAGTCATCCAT 36191 ||||| ||||| ||||| |||| ||||||||||| | |||||||||||| ||||| || Sbjct 54074 TTTCATAGAAAATAGCCATCCTTCTGGCCAGAAAGACCTTTGATTCATTAAATCATCTAT 54133 Query 36192 AACTTTTTCTTTTGGTAACCACACTAATTTATAAATTTCTTTTTCTGTTAAAGAAGCATC 36251 |||||| ||| |||||||| |||||||||||||||| | ||||||||||||| || Sbjct 54134 GACTTTTCCTTGGGGTAACCATACTAATTTATAAATTTGCTCCTCTGTTAAAGAAGAATT 54193 Query 36252 TTCTAAAGTGTTTTTATACCATGACTTAACTAATCTTAAATTGTTTCTAATAATTTTGTC 36311 || ||||| |||| |||||| | |||| | |||| ||||||||||||| |||| || Sbjct 54194 TTTTAAAGCATTTTCATACCAGGGTTTAATGATCCTTATATTGTTTCTAATAGTTTTATC 54253 Query 36312 TCCCTGGTGATTATAATCTTCTCTGCTATCAATAAGAACATACTTAACTTCTGGATTTTT 36371 || | |||||||||| ||||||||||| ||||| |||||||||||| | | |||||| Sbjct 54254 CCCATTACGATTATAATCATCTCTGCTATCTATAAGGACATACTTAACTGCCGAATTTTT 54313 Query 36372 TAATAACGGTTCAATTTCACTTTTAAACTTTTCAGAAGTTAATTGAAGTGGATTGTCTAA 36431 ||||||| | ||||||||| |||||| ||||| || ||||| ||| | | ||| | Sbjct 54314 TAATAACAGCTCAATTTCATCTTTAAAATTTTCTGAGGTTAAAGGAATTCTCTCATCTGA 54373 Query 36432 AAATTCGTAGATGCCTTCTGCAGtttttttGAAAGCTGTATTTTCTGACTTCAttttttt 36491 || ||| ||||| || || | | | | || || || |||| |||| ||||||||||| Sbjct 54374 AATTTCATAGATTCCCTCGGAAATCTCCTTAAATGCGCTATTCTCTGTTTTCATTTTTTT 54433 Score = 116 bits (128), Expect = 3e-20 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| ||||| ||||| || | |||||| || ||||| || |||||||| | || || Sbjct 44345 TTTTTCTCAAGCCCATAAGCCAGAGCAGCTGCTGTTGGCTCGTTAATAATACGTAATACT 44286 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | ||||| ||||| || ||||| || || || || | ||| || || ||||| || Sbjct 44285 TCTAGACCTGCAATCTGCCCCGCATCCTTTGTTGCCTGACGTTGAGAGTCATTAAAGTAA 44226 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 ||||||||||||||||| || | || || | ||| | |||||| ||||||| | Sbjct 44225 GCAGGAACAGTAATAACTGCTTGCGTAACGGGCTCACCCAAATAAGCCTCAGCCGTTTCT 44166 Query 518345 TTCATTTTACTTAA-AATCAT 518364 ||||| || ||||| |||||| Sbjct 44165 TTCATCTT-CTTAAGAATCAT 44146 Score = 111 bits (122), Expect = 1e-18 Identities = 274/412 (67%), Gaps = 24/412 (6%) Strand=Plus/Minus Query 517237 TTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAA 517296 ||| ||||||| ||||| || | ||||||| |||||| |||||||| | ||||| Sbjct 45264 TTTATTTGTTGCCTTATCTTTTGCCGATACATTAACAATACCGTTGGCATCAATGTCAAA 45205 Query 517297 TGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGT 517356 || || ||||||||||| || |||| | | |||| || || || ||| || |||| Sbjct 45204 GGTAACCTCAATTTGAGGCACGCCTCGCGGTGCAGAAGGAATACCGACCAGATCAAATTG 45145 Query 517357 TCCCAGATTA-TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAA 517415 |||| || | |||||||| | | || |||||| || | ||| | | |||| || | Sbjct 45144 ACCCA-ATAACTTATTATCGGCCGCCATTTCTCGTTCCCCTTGGAACACTCGGATTGTCA 45086 Query 517416 CTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-----TTACAAGGAAT 517470 | | |||||||| || | |||| || ||| ||| | || || ||||| Sbjct 45085 CGGCTGTTTGATTGTCATCAGCTGTTGAGAAAACT-TGGCTCTTGCGTGTT----GGAAT 45031 Query 517471 TGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGA 517530 ||||| || | |||||| | ||| | | ||| ||| ||||| | ||| | || Sbjct 45030 GGTTGTATTGCGATCAATCAAGCGGGTAAACACACCCCCTAAAGTTTCAATACCCAAGGA 44971 Query 517531 AAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAG 517590 | ||| || ||||||| | | || || || || |||| || ||| Sbjct 44970 CAAAGGGGTAACATCAAGCAACAGAACATCTTTAA------CATC------CCCTTTAAG 44923 Query 517591 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACA 517642 | ||| |||||||||||||||| ||| ||| |||||||||| |||||| Sbjct 44922 CACAGCCCCTTGAATAGCAGCACCTGCTGCCACAACTTCATCAGGGTTAACA 44871 >seq52729 Length=2290 Score = 102 bits (112), Expect = 6e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 ||||| ||||||||||| ||| | ||||| ||||| ||||| || ||||| || |||||| Sbjct 1998 GATGAGAATTGGAATGTGAAAGTGGCCGACTTTGGGTTTGCGCGGATCAAGGAGGAGAAC 1939 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 || | ||||||||| || || || || || ||||| || || || || || || || Sbjct 1938 GCGACCATGACTCGATGCGGCACGCCCTGCTGGACGGCGCCGGAGATCATCCGCGGCGAG 1879 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGTATTGAC 1078984 | || || || || ||| || ||||| || || | | |||||||| || |||| Sbjct 1878 AAGTACGATGAGCGGGCCGACGTGTTTTCGTTCGGCGTGATCATGTGGGAGGTGCTGAC 1820 >seq51164 Length=2675 Score = 102 bits (112), Expect = 6e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1086817 AACGAACTTATTCCAGAAATTCCTTATGCTCTTAAAATTAAGATGGCTTATCAGGCTTCA 1086876 ||||| || |||||||| ||||| | || || || |||||||| || |||| || Sbjct 2193 AACGAGCTCATTCCAGACATTCCCTTCGCGCTGAAGGCCAAGATGGCGTACCAGGGCTCG 2252 Query 1086877 AAAGGTATGCATTTTCTTCATTCATCAGGTATTGTTCATCGAGATTTGAAGTCGCTTAAT 1086936 || || ||||| || || || ||||| || || || || || || | |||||||| || Sbjct 2253 AAGGGCATGCACTTCCTGCACTCATCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 2312 Query 1086937 TTGCTTTTGGATTCAAAATGGAATGTCAAGGTCAGTGATTTTGGTCTTACTAAAGTCAA 1086995 |||| | || || || ||||||||||||||| || |||||||| || || |||| Sbjct 2313 CTGCTGCTCGACTCCAAGTGGAATGTCAAGGTCTCCGACTTTGGTCTCACCAAGTTCAA 2371 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 1076829 TTGTTGAAAAACGAACTCATCCCAGATATACCTTTTGCTCTCAAAGTCAAAATCGCATAT 1076888 ||| || | ||||| ||||| ||||| || || || || || || | ||| || || || Sbjct 2184 TTGCTGCACAACGAGCTCATTCCAGACATTCCCTTCGCGCTGAAGGCCAAGATGGCGTAC 2243 Query 1076889 CAAGCATCAAAGGGTATGCATTTCCTGCATTCATCAGGAATCACTCATCGTGATCTCAAG 1076948 || | || ||||| ||||| |||||||| ||||| || ||| || || || |||||| Sbjct 2244 CAGGGCTCGAAGGGCATGCACTTCCTGCACTCATCGGGCATCGTGCACCGCGACCTCAAG 2303 Query 1076949 TCTTTGAATCTACTTCTTGACATTAAGTGGAATGTTAAAGTTAGTGATTTTGGATTGACT 1077008 || | || || || || ||| ||||||||||| || || || ||||| | || Sbjct 2304 TCGCTCAACCTGCTGCTCGACTCCAAGTGGAATGTCAAGGTCTCCGACTTTGGTCTCACC 2363 Query 1077009 AAATTCAA 1077016 || ||||| Sbjct 2364 AAGTTCAA 2371 >seq47927 Length=3933 Score = 102 bits (112), Expect = 6e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 ||||| ||||||||||| ||| | ||||| ||||| ||||| || ||||| || |||||| Sbjct 3590 GATGAGAATTGGAATGTGAAAGTGGCCGACTTTGGGTTTGCGCGGATCAAGGAGGAGAAC 3649 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 || | ||||||||| || || || || || ||||| || || || || || || || Sbjct 3650 GCGACCATGACTCGATGCGGCACGCCCTGCTGGACGGCGCCGGAGATCATCCGCGGCGAG 3709 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGTATTGAC 1078984 | || || || || ||| || ||||| || || | | |||||||| || |||| Sbjct 3710 AAGTACGATGAGCGGGCCGACGTGTTTTCGTTCGGCGTGATCATGTGGGAGGTGCTGAC 3768 >seq31956 Length=2256 Score = 102 bits (112), Expect = 6e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 ||||| ||||||||||| ||| | ||||| ||||| ||||| || ||||| || |||||| Sbjct 1964 GATGAGAATTGGAATGTGAAAGTGGCCGACTTTGGGTTTGCGCGGATCAAGGAGGAGAAC 1905 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 || | ||||||||| || || || || || ||||| || || || || || || || Sbjct 1904 GCGACCATGACTCGATGCGGCACGCCCTGCTGGACGGCGCCGGAGATCATCCGCGGCGAG 1845 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGTATTGAC 1078984 | || || || || ||| || ||||| || || | | |||||||| || |||| Sbjct 1844 AAGTACGATGAGCGGGCCGACGTGTTTTCGTTCGGCGTGATCATGTGGGAGGTGCTGAC 1786 >seq52665 Length=8192 Score = 98.7 bits (108), Expect = 8e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1088680 GTTGATGAACATTTCAATGTCAAAATTGCCGATTTTGGATTTGCTCGTATCAAAGAAGAC 1088739 || |||||| | | ||||||||| | || || ||||| || || || ||||| || || Sbjct 4462 GTGGATGAAAACTGGAATGTCAAAGTAGCTGACTTTGGGTTCGCGCGGATCAAGGAGGAG 4403 Query 1088740 AATACCACAATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAGTTATTCGTGGA 1088799 ||| |||| ||||| || || || ||||| |||||||| || || || || || || ||| Sbjct 4402 AATGCCACGATGACCCGATGCGGCACTCCCTGTTGGACAGCGCCGGAGGTCATCCGCGGA 4343 Query 1088800 GAAAAATATTGTGAAAAGGCTGATGTATTTTCCTTTGGTGTAGTTATGTGGGAAGTTTTG 1088859 || || || || ||||| || | ||| || || | ||||||| | || | Sbjct 4342 GAGAAGTACGACGAGCGAGCTGACGTCTATTCATTCGGCATCACTATGTGGCAGGTGCTC 4283 Query 1088860 ACTGGTAAAGAACCTTTTGCTG 1088881 || | || ||||||||||||| Sbjct 4282 ACGCGCAAGGAACCTTTTGCTG 4261 Score = 96.9 bits (106), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 |||||||| |||||||||||| | || || ||||| || || || ||||| || ||||| Sbjct 4459 GATGAAAACTGGAATGTCAAAGTAGCTGACTTTGGGTTCGCGCGGATCAAGGAGGAGAAT 4400 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 |||| ||||| || || || ||||| |||||||| || || || | || || || Sbjct 4399 GCCACGATGACCCGATGCGGCACTCCCTGTTGGACAGCGCCGGAGGTCATCCGCGGAGAG 4340 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGTATTGACT 1078985 | || ||||| | || || | ||| || || || ||||||| | || | || Sbjct 4339 AAGTACGACGAGCGAGCTGACGTCTATTCATTCGGCATCACTATGTGGCAGGTGCTCACG 4280 Query 1078986 TGTAAAGAACCTTTTATTGGAGCAAACTTCATG 1079018 | || ||||||||| ||| ||||||||| Sbjct 4279 CGCAAGGAACCTTTTGCTGGGCGCAACTTCATG 4247 >seq49583 Length=1457 Score = 98.7 bits (108), Expect = 8e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1086817 AACGAACTTATTCCAGAAATTCCTTATGCTCTTAAAATTAAGATGGCTTATCAGGCTTCA 1086876 ||||| || || || ||| | || | || || || |||||||| || ||||| || Sbjct 559 AACGAGCTGATCCCGGAACTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCC 618 Query 1086877 AAAGGTATGCATTTTCTTCATTCATCAGGTATTGTTCATCGAGATTTGAAGTCGCTTAAT 1086936 || || ||||| || || || || || || || || || || || ||||||||||| ||| Sbjct 619 AAGGGCATGCACTTCCTCCACTCCTCGGGCATCGTGCACCGCGACTTGAAGTCGCTCAAT 678 Query 1086937 TTGCTTTTGGATTCAAAATGGAATGTCAAGGTCAGTGATTTTGGTCTTACTAAAGTCAA 1086995 |||| |||| | || ||||| ||||||||| || |||||||| || || |||| Sbjct 679 CTGCTGCTGGACGCCAAGTGGAACGTCAAGGTCTCGGACTTTGGTCTGACCAAGTTCAA 737 >seq37318 Length=1488 Score = 98.7 bits (108), Expect = 8e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1086817 AACGAACTTATTCCAGAAATTCCTTATGCTCTTAAAATTAAGATGGCTTATCAGGCTTCA 1086876 ||||| || || || ||| | || | || || || |||||||| || ||||| || Sbjct 937 AACGAGCTGATCCCGGAACTGCCGTTCGCACTCAAGGCCAAGATGGCCTACCAGGCCTCC 878 Query 1086877 AAAGGTATGCATTTTCTTCATTCATCAGGTATTGTTCATCGAGATTTGAAGTCGCTTAAT 1086936 || || ||||| || || || || || || || || || || || ||||||||||| ||| Sbjct 877 AAGGGCATGCACTTCCTCCACTCCTCGGGCATCGTGCACCGCGACTTGAAGTCGCTCAAT 818 Query 1086937 TTGCTTTTGGATTCAAAATGGAATGTCAAGGTCAGTGATTTTGGTCTTACTAAAGTCAA 1086995 |||| |||| | || ||||| ||||||||| || |||||||| || || |||| Sbjct 817 CTGCTGCTGGACGCCAAGTGGAACGTCAAGGTCTCGGACTTTGGTCTGACCAAGTTCAA 759 >seq25576 Length=589 Score = 98.7 bits (108), Expect = 8e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1076838 AACGAACTCATCCCAGATATACCTTTTGCTCTCAAAGTCAAAATCGCATATCAAGCATCA 1076897 ||||||||||| ||||| |||||| | | || || || || || || || || || | Sbjct 264 AACGAACTCATTCCAGACATACCTCTGGAGCTGAAGGTGAAGATGGCGTACCAGGCGGCC 205 Query 1076898 AAGGGTATGCATTTCCTGCATTCATCAGGAATCACTCATCGTGATCTCAAGTCTTTGAAT 1076957 ||||| ||||| |||||||| || || || ||| || || || |||||||| | || Sbjct 204 AAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 145 Query 1076958 CTACTTCTTGACATTAAGTGGAATGTTAAAGTTAGTGATTTTGGATTGACTAAATTC 1077014 || || || ||| |||||||| || || || || || ||||| |||| || ||| Sbjct 144 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGCCTGACCAAGTTC 88 >seq53816 Length=1746 Score = 96.9 bits (106), Expect = 3e-14 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 || ||||| ||||| || || | ||||| |||||||| || |||||||| || |||||| Sbjct 1365 GACGAAAACTGGAACGTGAAGGTGGCCGACTTTGGATTCGCGCGCATCAAGGAGGAGAAC 1424 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 || | ||||| || ||||| || || || ||||| || || || | || || || Sbjct 1425 GCGACGATGACCCGCTGTGGCACCCCCTGCTGGACGGCGCCGGAGGTCATCCGCGGCGAG 1484 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGT 1078978 | || |||||||||| ||| || | || || || | | ||||||||||| Sbjct 1485 AAGTACGACGAAAAGGCCGACGTGTACTCGTTCGGCGTCATCATGTGGGAAGT 1537 >seq51936 Length=4273 Score = 96.9 bits (106), Expect = 3e-14 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 || ||||| ||||| || || | ||||| |||||||| || |||||||| || |||||| Sbjct 4265 GACGAAAACTGGAACGTGAAGGTGGCCGACTTTGGATTCGCGCGCATCAAGGAGGAGAAC 4206 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 || | ||||| || ||||| || || || ||||| || || || | || || || Sbjct 4205 GCGACGATGACCCGCTGTGGCACCCCCTGCTGGACGGCGCCGGAGGTCATCCGCGGCGAG 4146 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGT 1078978 | || |||||||||| ||| || | || || || | | ||||||||||| Sbjct 4145 AAGTACGACGAAAAGGCCGACGTGTACTCGTTCGGCGTCATCATGTGGGAAGT 4093 >seq37797 Length=1969 Score = 96.9 bits (106), Expect = 3e-14 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 || ||||| ||||| || || | ||||| |||||||| || |||||||| || |||||| Sbjct 1961 GACGAAAACTGGAACGTGAAGGTGGCCGACTTTGGATTCGCGCGCATCAAGGAGGAGAAC 1902 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 || | ||||| || ||||| || || || ||||| || || || | || || || Sbjct 1901 GCGACGATGACCCGCTGTGGCACCCCCTGCTGGACGGCGCCGGAGGTCATCCGCGGCGAG 1842 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGT 1078978 | || |||||||||| ||| || | || || || | | ||||||||||| Sbjct 1841 AAGTACGACGAAAAGGCCGACGTGTACTCGTTCGGCGTCATCATGTGGGAAGT 1789 >seq25075 Length=1656 Score = 96.9 bits (106), Expect = 3e-14 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 1078806 GATGAAAATTGGAATGTCAAAATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAAC 1078865 || ||||| ||||| || || | ||||| |||||||| || |||||||| || |||||| Sbjct 1275 GACGAAAACTGGAACGTGAAGGTGGCCGACTTTGGATTCGCGCGCATCAAGGAGGAGAAC 1334 Query 1078866 GCCATCATGACTCGTTGTGGTACTCCTTGTTGGACTGCTCCTGAAATTATTCGTAATGAT 1078925 || | ||||| || ||||| || || || ||||| || || || | || || || Sbjct 1335 GCGACGATGACCCGCTGTGGCACCCCCTGCTGGACGGCGCCGGAGGTCATCCGCGGCGAG 1394 Query 1078926 ATCTATGACGAAAAGGTCGATGTATTTTCTTTTGGAATTGTTATGTGGGAAGT 1078978 | || |||||||||| ||| || | || || || | | ||||||||||| Sbjct 1395 AAGTACGACGAAAAGGCCGACGTGTACTCGTTCGGCGTCATCATGTGGGAAGT 1447 >seq56432 Length=6438 Score = 93.3 bits (102), Expect = 3e-13 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 1078773 CATCGTGACATTAAGCCATCAAATATTCTCATCGATGAAAATTGGAATGTCAAAATTGCC 1078832 || || ||| | ||||| || || | ||| | || || || ||||||||||| | ||| Sbjct 4472 CACCGCGACCTCAAGCCCTCCAACCTGCTCGTGGACGAGAACTGGAATGTCAAGGTGGCC 4413 Query 1078833 GATTTTGGATTTGCTCGCATCAAAGAAGAGAACGCCATCATGACTCGTTGTGGTACTCCT 1078892 || || || || || |||||||| || ||||| |||| |||||| || || || || || Sbjct 4412 GACTTCGGGTTCGCGCGCATCAAGGAGGAGAATGCCACCATGACCCGGTGCGGCACGCCC 4353 Query 1078893 TGTTGGACTGCTCCTGAAATTATTCGTAATGATATCTATGACGAAAAGGTCGATGTATTT 1078952 || ||||| || || || | || || || | || | ||| || ||| || || Sbjct 4352 TGCTGGACAGCGCCGGAGGTGATCCGCGGAGAGAAGTACGGCGAGCGGGCCGACGTGTTC 4293 Query 1078953 TCTTTTGGAATTGTTATGTGGGAAGTATTGACTTGTAAAGAACCTT 1078998 || || || | || |||||| | || |||| | || ||||||| Sbjct 4292 TCCTTCGGCGTGGTCATGTGGCAGGTGGTGACGCGCAAGGAACCTT 4247 >seq54098 Length=2193 Score = 91.5 bits (100), Expect = 1e-12 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 1076718 GTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACAAAACCA 1076777 || ||||| | ||||| ||||| ||||| || || |||||||| || || || || || Sbjct 1043 GTGATGACGGCGTTGCGGCATCCCAACGTGGTGCTGTTCATGGCGGCATCGACCAAGGCA 1102 Query 1076778 CCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCT 1076817 || || ||||| ||||| ||||||| |||||||||||||| Sbjct 1103 CCTAAGATGTGCATTGTCATGGAATACATGGCTCTTGGCT 1142 >seq53982 Length=6183 Score = 89.7 bits (98), Expect = 4e-12 Identities = 177/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 1086707 GTCTACGTCATCCCAATGTGGTTTTGTTTATGGCTGCTAGTACAAAATCACCAAATATGT 1086766 |||| || || ||||| ||||| | || ||||| || | || | | || ||| Sbjct 4305 GTCTTCGGCACCCCAACGTGGTCCTCTTCATGGCGGCCTGCACGCGACCGCCGCGGTTGT 4246 Query 1086767 GTATTGTGATGGAGTTTATGTCTCTTGGATCTCTTTACGATCTTCTTGGTAACGAACTTA 1086826 | || ||||||||||| ||| | || || || || |||||||| || ||||| || | Sbjct 4245 GCATCGTGATGGAGTTCATGGCGCTCGGTTCGCTCTACGATCTGCTCCAGAACGAGCTCA 4186 Query 1086827 TTCCAGAAATTCCTTATGCTCTTAAAATTAAGATGGCTTATCAGGCTTCAAAAGGTATGC 1086886 | || || || || | | || || | |||||||| || ||||| | || || |||| Sbjct 4185 TACCGGACATCCCCCACGGCCTCAAGTTCAAGATGGCCTACCAGGCGGCCAAGGGCATGC 4126 Query 1086887 ATTTTCTTCATTCATCAGGTATTGTTCATCGAGATTTGAAGTCGCTTAATTTGCTTTTGG 1086946 | || || || || || || || || || || || | |||||||| || | || | | Sbjct 4125 ACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAACCTCCTCCTCG 4066 Query 1086947 ATTCAAAATGGAATGTCAAGGT 1086968 | | || ||||| || ||||| Sbjct 4065 ACGCCAAGTGGAACGTTAAGGT 4044 >seq52517 Length=2355 Score = 87.8 bits (96), Expect = 1e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1076718 GTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACAAAACCA 1076777 || |||||| | ||||| || || ||||| || || |||||||| || | || || ||| Sbjct 896 GTGATGACAGCGTTGCGGCACCCCAACGTGGTACTCTTCATGGCCGCCTGCACCAAGCCA 955 Query 1076778 CCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCTC 1076818 ||||| ||||| || || ||||| | ||||||||||||||| Sbjct 956 CCCAAGATGTGCATCGTCATGGAGTACATGGCTCTTGGCTC 996 >seq36620 Length=7079 Score = 87.8 bits (96), Expect = 1e-11 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1076716 GAGTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACAAAAC 1076775 |||| ||||| ||||||| || || || || || || ||||||||||| || || || Sbjct 6400 GAGTGATGACTGCTTTGCGCCACCCGAATGTGGTGCTGTTCATGGCTGCCTCCACTAAGG 6459 Query 1076776 CACCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCTC 1076818 ||||||| |||||||| || ||||| ||||||| || ||||| Sbjct 6460 CACCCAAGATGTGTATCGTCATGGAGCTCATGGCCCTCGGCTC 6502 >seq33929 Length=6708 Score = 87.8 bits (96), Expect = 1e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1076718 GTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACAAAACCA 1076777 |||||||||||| || | || || ||||| || || |||||||| || || || || || Sbjct 5137 GTAATGACAACTCTGAGGCACCCGAACGTGGTGCTGTTCATGGCGGCGTCGACCAAGCCG 5196 Query 1076778 CCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCTC 1076818 ||||| ||||| || || ||||| |||||||| || ||||| Sbjct 5197 CCCAAGATGTGCATCGTCATGGAGTTCATGGCCCTCGGCTC 5237 >seq47133 Length=3419 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1076712 GTCAGAGTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACA 1076771 || ||||||||||| | ||||||| || || ||||| || |||||||| || || || Sbjct 123 GTGAGAGTAATGACGGCGCTGCGACACCCCAATGTTGTGCTGTTCATGGCAGCGTCTACC 64 Query 1076772 AAACCACCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCTC 1076818 || | ||||| |||||||| || ||||| |||||||| || || || Sbjct 63 AAGGCGCCCAAGATGTGTATCGTGATGGAGTTCATGGCCCTCGGATC 17 >seq39864 Length=4757 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1076712 GTCAGAGTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACA 1076771 || ||||||||||| | ||||||| || || ||||| || |||||||| || || || Sbjct 2284 GTGAGAGTAATGACGGCGCTGCGACACCCCAATGTTGTGCTGTTCATGGCAGCGTCTACC 2225 Query 1076772 AAACCACCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCTC 1076818 || | ||||| |||||||| || ||||| |||||||| || || || Sbjct 2224 AAGGCGCCCAAGATGTGTATCGTGATGGAGTTCATGGCCCTCGGATC 2178 >seq30838 Length=3029 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1076712 GTCAGAGTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACA 1076771 || ||||||||||| | ||||||| || || ||||| || |||||||| || || || Sbjct 556 GTGAGAGTAATGACGGCGCTGCGACACCCCAATGTTGTGCTGTTCATGGCAGCGTCTACC 497 Query 1076772 AAACCACCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCTC 1076818 || | ||||| |||||||| || ||||| |||||||| || || || Sbjct 496 AAGGCGCCCAAGATGTGTATCGTGATGGAGTTCATGGCCCTCGGATC 450 >seq27521 Length=3190 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1076712 GTCAGAGTAATGACAACTTTGCGACATCCTAACGTTGTTCTTTTCATGGCTGCTTCAACA 1076771 || ||||||||||| | ||||||| || || ||||| || |||||||| || || || Sbjct 3068 GTGAGAGTAATGACGGCGCTGCGACACCCCAATGTTGTGCTGTTCATGGCAGCGTCTACC 3127 Query 1076772 AAACCACCCAAAATGTGTATTGTAATGGAATTCATGGCTCTTGGCTC 1076818 || | ||||| |||||||| || ||||| |||||||| || || || Sbjct 3128 AAGGCGCCCAAGATGTGTATCGTGATGGAGTTCATGGCCCTCGGATC 3174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3778006675051852