Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq42602 138 1e-27 seq38368 138 1e-27 seq38367 138 1e-27 seq30353 138 1e-27 seq52962 132 6e-26 seq47808 113 6e-20 seq47532 113 6e-20 seq38762 113 6e-20 seq38761 113 6e-20 seq53501 87.8 2e-12 >seq42602 Length=5458 Score = 138 bits (152), Expect = 1e-27 Identities = 696/1094 (64%), Gaps = 30/1094 (3%) Strand=Plus/Minus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 4886 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 4827 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 112106 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 4826 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 4767 Query 112107 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 112166 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 4766 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 4707 Query 112167 CCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACA 112226 || || |||| |||||||| | || | ||| ||||||| || | ||| Sbjct 4706 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 4647 Query 112227 AAGTACGAGGAAGAAAGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 112282 |||||| | || | || ||| | ||| ||| | || ||| || ||||| Sbjct 4646 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 4591 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || || ||| |||| || | |||||| || || || || ||||| ||||| |||||||| Sbjct 4590 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 4531 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 ||| ||| || || || | | || ||| || || ||||| || || || Sbjct 4530 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 4471 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 4470 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 4411 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 4410 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 4357 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 112579 ||| ||||| || ||||| |||| || || || | || | |||||||| || Sbjct 4356 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 4297 Query 112580 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGC 112639 | || || || || || ||| | ||| | || || ||| |||| || || || || || Sbjct 4296 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 4240 Query 112640 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 112698 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 4239 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 4180 Query 112699 CGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAG 112755 ||| || || ||||| || || ||||||| || | || ||| ||| | || Sbjct 4179 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGC---CTCGAACGAGCTCGCCC 4124 Query 112756 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAA 112814 |||| || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 4123 AGGTCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAG 4065 Query 112815 TTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || | |||| | | | | | | ||||||| | | ||| | || Sbjct 4064 CCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGC 4005 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 ||| || | || || || ||| || | |||| || ||||| || ||||| ||| Sbjct 4004 ATCGCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACC 3945 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGA 112994 | || ||| |||| || || || |||||||| ||||||||||| |||||||| | | Sbjct 3944 TCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGC 3885 Query 112995 AGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAG 113054 | | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 3884 CGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAG 3825 Query 113055 ATTGGTCTCTGGTC 113068 || |||||||| Sbjct 3824 CGCGGCCTCTGGTC 3811 >seq38368 Length=5470 Score = 138 bits (152), Expect = 1e-27 Identities = 696/1094 (64%), Gaps = 30/1094 (3%) Strand=Plus/Plus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 573 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 632 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 112106 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 633 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 692 Query 112107 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 112166 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 693 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 752 Query 112167 CCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACA 112226 || || |||| |||||||| | || | ||| ||||||| || | ||| Sbjct 753 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 812 Query 112227 AAGTACGAGGAAGAAAGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 112282 |||||| | || | || ||| | ||| ||| | || ||| || ||||| Sbjct 813 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 868 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || || ||| |||| || | |||||| || || || || ||||| ||||| |||||||| Sbjct 869 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 928 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 ||| ||| || || || | | || ||| || || ||||| || || || Sbjct 929 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 988 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 989 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 1048 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 1049 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 1102 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 112579 ||| ||||| || ||||| |||| || || || | || | |||||||| || Sbjct 1103 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 1162 Query 112580 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGC 112639 | || || || || || ||| | ||| | || || ||| |||| || || || || || Sbjct 1163 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 1219 Query 112640 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 112698 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 1220 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 1279 Query 112699 CGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAG 112755 ||| || || ||||| || || ||||||| || | || ||| ||| | || Sbjct 1280 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGC---CTCGAACGAGCTCGCCC 1335 Query 112756 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAA 112814 |||| || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 1336 AGGTCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAG 1394 Query 112815 TTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || | |||| | | | | | | ||||||| | | ||| | || Sbjct 1395 CCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGC 1454 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 ||| || | || || || ||| || | |||| || ||||| || ||||| ||| Sbjct 1455 ATCGCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACC 1514 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGA 112994 | || ||| |||| || || || |||||||| ||||||||||| |||||||| | | Sbjct 1515 TCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGC 1574 Query 112995 AGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAG 113054 | | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 1575 CGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAG 1634 Query 113055 ATTGGTCTCTGGTC 113068 || |||||||| Sbjct 1635 CGCGGCCTCTGGTC 1648 >seq38367 Length=4245 Score = 138 bits (152), Expect = 1e-27 Identities = 696/1094 (64%), Gaps = 30/1094 (3%) Strand=Plus/Minus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 2484 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 2425 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 112106 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 2424 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 2365 Query 112107 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 112166 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 2364 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 2305 Query 112167 CCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACA 112226 || || |||| |||||||| | || | ||| ||||||| || | ||| Sbjct 2304 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 2245 Query 112227 AAGTACGAGGAAGAAAGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 112282 |||||| | || | || ||| | ||| ||| | || ||| || ||||| Sbjct 2244 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 2189 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || || ||| |||| || | |||||| || || || || ||||| ||||| |||||||| Sbjct 2188 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 2129 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 ||| ||| || || || | | || ||| || || ||||| || || || Sbjct 2128 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 2069 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 2068 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 2009 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 2008 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 1955 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 112579 ||| ||||| || ||||| |||| || || || | || | |||||||| || Sbjct 1954 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 1895 Query 112580 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGC 112639 | || || || || || ||| | ||| | || || ||| |||| || || || || || Sbjct 1894 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 1838 Query 112640 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 112698 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 1837 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 1778 Query 112699 CGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAG 112755 ||| || || ||||| || || ||||||| || | || ||| ||| | || Sbjct 1777 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGC---CTCGAACGAGCTCGCCC 1722 Query 112756 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAA 112814 |||| || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 1721 AGGTCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAG 1663 Query 112815 TTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || | |||| | | | | | | ||||||| | | ||| | || Sbjct 1662 CCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGC 1603 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 ||| || | || || || ||| || | |||| || ||||| || ||||| ||| Sbjct 1602 ATCGCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACC 1543 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGA 112994 | || ||| |||| || || || |||||||| ||||||||||| |||||||| | | Sbjct 1542 TCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGC 1483 Query 112995 AGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAG 113054 | | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 1482 CGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAG 1423 Query 113055 ATTGGTCTCTGGTC 113068 || |||||||| Sbjct 1422 CGCGGCCTCTGGTC 1409 >seq30353 Length=5073 Score = 138 bits (152), Expect = 1e-27 Identities = 696/1094 (64%), Gaps = 30/1094 (3%) Strand=Plus/Plus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 2590 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 2649 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 112106 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 2650 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 2709 Query 112107 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 112166 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 2710 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 2769 Query 112167 CCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACA 112226 || || |||| |||||||| | || | ||| ||||||| || | ||| Sbjct 2770 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 2829 Query 112227 AAGTACGAGGAAGAAAGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 112282 |||||| | || | || ||| | ||| ||| | || ||| || ||||| Sbjct 2830 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 2885 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || || ||| |||| || | |||||| || || || || ||||| ||||| |||||||| Sbjct 2886 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 2945 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 ||| ||| || || || | | || ||| || || ||||| || || || Sbjct 2946 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 3005 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 3006 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 3065 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 3066 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 3119 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 112579 ||| ||||| || ||||| |||| || || || | || | |||||||| || Sbjct 3120 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 3179 Query 112580 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGC 112639 | || || || || || ||| | ||| | || || ||| |||| || || || || || Sbjct 3180 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 3236 Query 112640 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 112698 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 3237 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 3296 Query 112699 CGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAG 112755 ||| || || ||||| || || ||||||| || | || ||| ||| | || Sbjct 3297 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGC---CTCGAACGAGCTCGCCC 3352 Query 112756 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAA 112814 |||| || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 3353 AGGTCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAG 3411 Query 112815 TTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || | |||| | | | | | | ||||||| | | ||| | || Sbjct 3412 CCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGC 3471 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 ||| || | || || || ||| || | |||| || ||||| || ||||| ||| Sbjct 3472 ATCGCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACC 3531 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGA 112994 | || ||| |||| || || || |||||||| ||||||||||| |||||||| | | Sbjct 3532 TCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGC 3591 Query 112995 AGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAG 113054 | | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 3592 CGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAG 3651 Query 113055 ATTGGTCTCTGGTC 113068 || |||||||| Sbjct 3652 CGCGGCCTCTGGTC 3665 >seq52962 Length=211977 Score = 132 bits (146), Expect = 6e-26 Identities = 327/493 (66%), Gaps = 10/493 (2%) Strand=Plus/Plus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||||||||| ||||| || | || ||| || | ||| || || || ||| Sbjct 111048 CGGTCAAAGCGACCAGGGCGTAGCAAAGCCGGATCCAGAACATCGGGACGGTTGGTAGCG 111107 Query 15945 GCGATGACAACAATACCTGTTTCGTTATC---AAAACCATCCATCTCTGTCAAAAGCTGG 16001 || | ||| ||| | ||| || || ||| |||||||| || ||| || ||| Sbjct 111108 GCAA---CAATAATTACGCCTTCATTTTCTTCAAAGCCATCCATTTCCACCAAGAGTTGG 111164 Query 16002 TTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTC 16059 || | ||||| || ||||||||||| | | | || | | |||| || || || Sbjct 111165 TTCAATGTTTGCTCGCGTTCATCATTTCCACCGCCAAGGCCC--GCACCACGATGGCGTC 111222 Query 16060 CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAA 16119 | || |||||||| ||||||||||| || || || || ||| | ||| ||| | Sbjct 111223 CAACCGCATCAATTTCATCAATGAAAACAATACAGGGGGCATTCTTTTTAGCCTGTTCGA 111282 Query 16120 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 16179 | | ||| || ||||| |||| || ||||| |||||||| |||||||||| | | | Sbjct 111283 ACATATCACGAACACGGCTGGCACCTACACCGACAAACATTTCCACAAAGTCAGATCCTG 111342 Query 16180 AACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 16239 || | |||||| ||||| | |||||| || || | ||| || | | |||||||| Sbjct 111343 AAATGCTAAAGAAGGGCACATTGGCTTCACCTGCGATCGATCGAGCCAATAAAGTCTTAC 111402 Query 16240 CCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGT 16299 |||| || || || | || | |||| || ||||| |||| | | Sbjct 111403 CCGTTCCGGGAGGGCCTACCAGCAAAACACCCCGCGGAATTCGCCCGCCCAACCGTTGGA 111462 Query 16300 ATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAA 16359 || | | ||| | |||||| ||||| || || ||||| | ||| ||||||| | |||| Sbjct 111463 ATTTTTGAGGATCCTTAAGGAAATCAACGATTTCTTCAAGTTCGGCTTTGGCTTCATCAA 111522 Query 16360 TCCCCTCAACATC 16372 | || | ||||| Sbjct 111523 TTCCTGCGACATC 111535 >seq47808 Length=3094 Score = 113 bits (124), Expect = 6e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 102122 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 102176 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 666 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 608 Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 607 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 548 Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 547 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 488 Query 102297 ATCTCTCGTGACGAGGGACTCCAC 102320 ||| || |||||||| |||||| Sbjct 487 ATCAGCCGCGACGAGGGCCTCCAC 464 >seq47532 Length=3156 Score = 113 bits (124), Expect = 6e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 102122 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 102176 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 2491 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 2549 Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 2550 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 2609 Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 2610 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 2669 Query 102297 ATCTCTCGTGACGAGGGACTCCAC 102320 ||| || |||||||| |||||| Sbjct 2670 ATCAGCCGCGACGAGGGCCTCCAC 2693 >seq38762 Length=2104 Score = 113 bits (124), Expect = 6e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 102122 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 102176 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 1497 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 1439 Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 1438 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 1379 Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 1378 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 1319 Query 102297 ATCTCTCGTGACGAGGGACTCCAC 102320 ||| || |||||||| |||||| Sbjct 1318 ATCAGCCGCGACGAGGGCCTCCAC 1295 >seq38761 Length=2091 Score = 113 bits (124), Expect = 6e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 102122 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 102176 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 1484 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 1426 Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 1425 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 1366 Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 1365 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 1306 Query 102297 ATCTCTCGTGACGAGGGACTCCAC 102320 ||| || |||||||| |||||| Sbjct 1305 ATCAGCCGCGACGAGGGCCTCCAC 1282 >seq53501 Length=235563 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 13586 AAAATACCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACC 13645 |||| ||| ||||||||||||| | || || ||| ||| ||| |||| |||| Sbjct 2111 AAAAACCCGATTCTATCAAGCCTCGACCTCGGAACTGTATGGGCTTGTTCAGGAAACACC 2052 Query 13646 ACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGC 13705 || || ||| ||| |||||||| || || ||| || | || | ||| | || Sbjct 2051 TCAGAAGGAGACGACGCCCTTCTATCCTCGGTCGCCGTATGCGGTTGCGAAGCTATACGC 1992 Query 13706 ACATTGGCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCT 13765 | | ||| | ||| || |||||| | ||||| |||||||| ||| ||| ||||| Sbjct 1991 ATACTGGATTACGGTGAACTATCGCGAGGCATACGGGCTGTTTGCCTGCAACGGCATCCT 1932 Query 13766 CTTCAACCATGAATCACCGAGACGAGGTGCAGAC-TTTGTGACCATGAAGATTAC 13819 ||||| ||||||||||| | || || | |||| || || |||| ||||| || Sbjct 1931 GTTCAATCATGAATCACCAATTCGCGGCG-AGACATTCGTCACCAGAAAGATCAC 1878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620302122934240