Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq24986 93.3 1e-14 seq36931 87.8 6e-13 >seq24986 Length=52538 Score = 93.3 bits (102), Expect = 1e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 21292 GCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGA 21351 |||||||| |||||| ||||| | |||| || || |||||| |||| || || Sbjct 6635 GCTGGCGAAGGAGCTCAACGTCCCCATCATCGCACTCTCCCAGCTCTCCCGCCTGCTCGA 6694 Query 21352 GCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCA 21411 | | ||| | | ||||| ||| |||||||||||||||| ||||| |||||||||| Sbjct 6695 GAACCGGGAGGAGAAGCGGCCGCAATTGTCGGACCTGCGCGAATCCGGTTCGATCGAGCA 6754 Query 21412 GGACGCCGATGTGATCATGTTCGTGT 21437 |||||| || ||| | | ||||||| Sbjct 6755 GGACGCGGACGTGGTGCTATTCGTGT 6780 >seq36931 Length=650932 Score = 87.8 bits (96), Expect = 6e-13 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 21312 TCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCG-GCCGAACAAGCGA 21370 |||||||||| | |||||| ||||| || |||| ||| | ||| |||||| Sbjct 153471 TCCCCGTGATTGCGCTGTCCCAGCTGTCGCGTCAGGTGGAATCGCGCGACGA-CAAGCGC 153413 Query 21371 CCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATG 21430 ||| | |||||||||||||| ||||| ||||||||||||||||||| || | || Sbjct 153412 CCGCAACTCTCGGACCTGCGCGAATCCGGCTCGATCGAGCAGGACGCCGACGTCGTGCTG 153353 Query 21431 TTCGTGTACCGCGACGAGGTCTACC 21455 ||||||| |||||| || ||||| Sbjct 153352 TTCGTGTTCCGCGAGGAATACTACC 153328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157004537244988