Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq36931 84.2 8e-12 >seq36931 Length=650932 Score = 84.2 bits (92), Expect = 8e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 45563 GAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAG 45622 || || ||| ||||||||| ||| ||| ||||||||||| |||||| | || ||| Sbjct 153433 GAATCGCGCGACGACAAGCGCCCGCAACTCTCGGACCTGCGCGAATCCGGCTCGATCGAG 153374 Query 45623 CAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGAA 45661 || ||||||||| |||| ||||||||| |||||| ||| Sbjct 153373 CAGGACGCCGACGTCGTGCTGTTCGTGTTCCGCGAGGAA 153335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172638795602744