Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq53101 378 3e-100 seq24987 233 8e-57 seq24986 158 5e-34 seq47259 109 2e-19 seq56171 86.0 2e-12 >seq53101 Length=121849 Score = 378 bits (418), Expect = 3e-100 Identities = 1406/2146 (66%), Gaps = 131/2146 (6%) Strand=Plus/Plus Query 52971 ACCGAGAAGGCCAACGACGTCGC-GCAGAAGATGCGCGCGGCTTTCGCGCGCTGGATTTG 53029 |||||| ||| || |||| || ||||||||| | | ||| ||||||||| || Sbjct 46911 ACCGAGGCGGCGAA-GACGAAGCTGCAGAAGATCAAGGACGAATTCCAGCGCTGGATCTG 46969 Query 53030 GACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTTCAACAACAT 53089 | | ||| | | ||| ||||||| || | | ||||||||| |||||||||||| Sbjct 46970 GTCCGACCCCGATCGCACCGACCGCCTGGCGCGCGTCTACAACGACCGCTTCAACAACAT 47029 Query 53090 CGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTATCGCTGCGC-TTCG 53148 ||| || ||| ||||| || ||||| |||| ||| || |||| || |||| || | Sbjct 47030 CGCCCCACGCGCCTTCGATGGATCGCATCTGAAGCTACCCGGCGCCTCTG-GCGCCTTTG 47088 Query 53149 ACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGCGATATGTACC 53208 || | | | ||||| || | |||||||||| ||| || || | || | Sbjct 47089 TTCTTTATGGGCATCAGAAACGTGGCATCTGGCGCATCATCTCGGCGGGTTCGACCTATC 47148 Query 53209 TCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACGGGCATGGAGGAGC 53268 ||||||||||||||||||| |||||||| | |||||| || ||| |||||| ||| Sbjct 47149 TCGCGCACGCTGTCGGCGCCGGCAAGACCATGACGATGGCGGCCGCGGTGATGGAGCAGC 47208 Query 53269 GTCGGCTCGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATGCTCGCGCAAT 53328 | |||||||||||| | |||| ||||| || || || |||| || ||||| Sbjct 47209 GCCGGCTCGGCCTGATCGCCAAGGCGATGATCGTCGTTCCCGGCCACTGCCTGGCGCAGG 47268 Query 53329 TCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGGACGAGCAGA 53388 |||||||| || || | ||| || ||| |||| ||| |||||||||||||| | Sbjct 47269 CGGCGCGCGAATTTCTCGCGCTCTATCCGAACGCGCGGATCCTGGTCGCGGACGAGACCA 47328 Query 53389 ATTTCCACACCCACAACCGCCGCCGGTTC--GTCGCGCAGGCCGCGCTCAACAACCCGGA 53446 ||||| || |||| || | || ||| ||||||| || ||| | | ||| Sbjct 47329 ATTTCAGCAAGGACAAGCGGCATCGCTTCCTGTCGCGC--GCGGCGACCGCGACTTGGGA 47386 Query 53447 CGCGATCATCATCACGCACTCGGCGTTCGGCCGCATCGGCATGTCCGACGAGTACGCCTC 53506 |||||||||||||| || || || || |||| | ||| || || | |||| Sbjct 47387 TGCGATCATCATCACCCATTCAGCTTT---CCGCTT---CATCTC-----GGTGC-CCTC 47434 Query 53507 GGCGTTCATCCGCGACCAGATC---GACGAG-TGGAAAGCCGCGCTCGACGAGACG---- 53558 ||||||| | | |||| |||||| |||| |||| |||||||| Sbjct 47435 GGCGTTCGAGCAACAGATGATCCAGGACGAGCTGGA-------GCTCTACGAGACGCTGC 47487 Query 53559 -GAC--AAG--------GGCGACCGCATCACGCGCAAGCAGATCGAGCGCCGCATCGNNN 53607 ||| ||| | ||| ||| || ||||||||| | |||| | | || | Sbjct 47488 TGACCAAAGTCGAAAGCGACGATCGCGTCTCGCGCAAGCGGCTCGAAAGGCTCAAGGAGG 47547 Query 53608 NNNNNNNNNNNNNGCTGGAGGCGAAACAGGGCGGCGAGAAGAAGGACAAGGTGCTGTCGT 53667 ||| || ||| | || | | ||||| | |||| | Sbjct 47548 GCCTGAAAGAGCGGCTCGAAGCG----CTGTCGACTCG--CAAGGATGACCTGCTCACCA 47601 Query 53668 TCGAGGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAGTTCCGAAAACTCG 53727 || ||| ||||| |||||| | ||||||||||| || |||||||| |||||| Sbjct 47602 TCTCCGAGATGGGCATCGACCAGATCATCGTCGACGAGGCGCAGGAGTTCCGCAAACTCT 47661 Query 53728 ACTTCGCGACGCAGCAGAGCAAC-ATCAAGGGCATCGACCCGGCGGGCTCGCAGCGCGCG 53786 ||| ||||| || | | || | |||||| |||| ||| ||||||||||||||| Sbjct 47662 CCTTTGCGAC-CAATATGTCGACGTTGAAGGGCGTCGATCCGAACGGCTCGCAGCGCGCG 47720 Query 53787 ATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCCGGGCCGCGCGCTCGTG 53846 ||| |||||| | ||| | ||| | || ||||| |||||||| ||||||||| Sbjct 47721 TGGGATCTGTTCGTCAAGTCGCGCTACGTCGACATGAAGAACCCGGGCCGTGCGCTCGTG 47780 Query 53847 GCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCACAACGCT-T 53905 ||| |||||||| ||| |||| ||||| | |||||| | | | | | ||||||| | Sbjct 47781 CTCGCCTCCGGCACCCCGATCACCAACACCCTCGGCGAGATGTTCTCGGTCCAACGCTAT 47840 Query 53906 CTTCCAGCCCGAGCAGCTTGC-CGAGGATGGTCTGGATACGTTCGACGCGTGGGC--CAA 53962 || | ||| |||| |||| ||| ||| | |||||||| ||||| | | Sbjct 47841 CTCGGATATGTGGCA--TTGCTCGAGCGTGGCCTGCACGAATTCGACGCCTGGGCGTCGA 47898 Query 53963 CCAATACGGTGACATCGTTG--CGGGCTTCGAGCAGAACGCCGCCGGCGGCTACGAGGTC 54020 || | ||||||| || | | || || |||| | | | | | || ||| || | Sbjct 47899 CC--TTCGGTGACGTC-TCGACCGAGC-TCGAACTGCAGCCATCGGGTAAATACAAGCCC 47954 Query 54021 GTGAGCCGGTTCGCGAAGTTCCAGAACGTGCCCGAGCTGAT-GCGCCGCGTGCGCTCGTT 54079 || ||| ||||||| ||| ||||| ||||||||||| ||| | | ||||| | Sbjct 47955 GTCTCCCGCTTCGCGACCTTCGTCAACGTTCCCGAGCTGATCGCGATG-TTCCGCTCCAT 48013 Query 54080 CATGGACATCCTGACGAGCCAGCAGCTCTCGCAGTACGTGGATCGTCCGGCGATCGAGGG 54139 | ||| || ||| | | || | | ||||||||| | ||||||||| | Sbjct 48014 CGCCGACGTCGTGATGCCCGAGGATTTGCGCCAGTACGTGAAGGTGCCGGCGATCTCGAC 48073 Query 54140 CGGCGGCCGTCAGATCATGGTCACGCCGGAGCCGTTC---GGATACAAGGCGTACCAGAA 54196 |||| | || |||||| |||| | |||||| | | || |||| ||||||| Sbjct 48074 CGGCAGACGGCAGATC---CTCACAGCAAAGCCGTCCGCTGCATTCAAGCGTTACCAGAC 48130 Query 54197 GGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGGCCGCCGCAGAAGGGGCA 54256 | ||||| ||||||||| |||||| | ||| | | |||| || || | Sbjct 48131 GCTGCTCGGCGAGCGCATCAAGGCGATCGAGGAGCGCGACCGTGCGCCCGAGCCCGGCGA 48190 Query 54257 GGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCCGCGATCGACATGCGCTTCGT 54316 |||||| || || || ||| | || ||||| | | ||||||||| ||||| | || Sbjct 48191 CGACATCCTCTTGTCGGTCATCACCGATGGCCGCCACGCGGCGATCGACCTGCGCCTGGT 48250 Query 54317 CGA-CCCGACCGCGCCGAGCGA-CCCGAGCAGCAAGCTGAACCAGATGATCG---ACGCC 54371 ||| |||||| | | | ||| |||| || ||||||||||||| | ||| ||||| Sbjct 48251 CGATCCCGACAATGAC-AACGAGGCCGA-CAACAAGCTGAACCAGCTCGTCGGCAACGCC 48308 Query 54372 GT---GATC---GCCGACTACCATGCGGCGTCCGACTTCGAGTATTCG-ACGAACGGCAA 54424 | ||| | ||| ||| ||| | | | || | |||| || ||||||| Sbjct 48309 TTCCGCATCTGGGGCGA-TAC--TGCCGAGCGCACCT----ATGTTCGCACCGACGGCAA 48361 Query 54425 ---GGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTTACCGACATCGGGCTCGGCGA 54481 | |||| | | | |||||| |||| || ||||| | ||| || ||| | | Sbjct 48362 GCCGTTCGAACTGCCC---GGCGCGGCGCAGATGATCTTCTCGGACCTC-GGCACCATCA 48417 Query 54482 GCAGTCGGCGAAGAACCGCGG--TTTCGACATGAAGGCGTGGA-TCGAGAAGCGTCTGGT 54538 || ||| | |||| ||||| | ||| | | | || |||| ||| || | | || || Sbjct 48418 GC-GTC-GAGAAGTCGCGCGGCTTCTCGGCCT-ATCGC-TGGATTCGCGACGAG-CTCGT 48472 Query 54539 CGACGGCGGCATCCCGCGCGAGC-AGATCGCGTTCATGCGCGA---CAACAAGGAGCATG 54594 | | ||| | ||| || | | ||||| ||||||| || ||| ||| | | | Sbjct 48473 CCGCATGGGCGTGCCG-GCATCCGAAATCGCCTTCATGCAGGATTTCAAGAAGTCGGAGG 48531 Query 54595 CCAAGAAAGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCG 54654 | ||| |||||||||||| ||| |||||| ||||| ||| | |||||||| Sbjct 48532 C---GAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTCCGCTTCCTGATCGGGA 48588 Query 54655 GCAAGGAC---ATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATC 54711 || |||| |||| ||||||||||||| |||| ||||||| | || | | || | Sbjct 48589 GCTCGGACACGATGGGGACCGGCGTCAACGCGCAGCTGCGCCTCAAGGCCTTGCATCACC 48648 Query 54712 TGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGG 54771 | |||| ||||||| | ||| | ||||||||||||||||||||||| | || |||| Sbjct 48649 TCGACGTGCCGTGGCTGCCGTCGCAGATCGAGCAGCGCGAGGGCCGCATCGTGCGCCAGG 48708 Query 54772 GCAACCAGAACAAGCAGGTGCGCATCCGCGCCTGGGCGACGAAGGGC-AGCTACGACTCC 54830 |||||||| || | |||| ||| ||||| ||||| ||||| ||| ||| | Sbjct 48709 GCAACCAGCACGACGAGGTCGATATCTTCGCCTATGCGACCGAGGGCTCGCT-CGATGCG 48767 Query 54831 ACCATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCGCTCAACGGCGAC 54890 |||||| || |||| |||||||| || ||||||| ||| || ||||||| Sbjct 48768 CAGATGTGGCAGAACAACGAGCGCAAGGCCCGCTTCATCGCCGCGGCTCTTTCCGGCGAC 48827 Query 54891 GACAGCG-TGCGCTCGCTCGAGGACGTGTCCGAG-GCATCGGCA-----TTCGACATGGC 54943 || || | ||| |||||||||| || |||| || | || |||| ||||| Sbjct 48828 -ACTTCGATCCGCAGGCTCGAGGACATGGGCGAGAGCCAGGCCAACCAGTTCGCGATGGC 48886 Query 54944 CGCCGCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCTGGCGGGCCTGAAGGCCGACGT 55003 | ||| | |||||||| ||| ||| ||| || ||| || || |||||||| | Sbjct 48887 CAAGGCGATCGCGTCGGGTGACCCGCGGCTGATGCAGAAGGCCGGGCTCGAGGCCGACAT 48946 Query 55004 CGAGCGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAGAAC 55049 || |||||| || |||||| || ||| || ||| || ||| || Sbjct 48947 CGCGCGGCTCGAACGCCTGCGCGCCGCCCATATCGATGATCAGCAC 48992 Score = 89.7 bits (98), Expect = 2e-13 Identities = 181/258 (70%), Gaps = 13/258 (5%) Strand=Plus/Plus Query 52515 GAGGTCATCGACGCGCTCGGCACCGCGATCTACGAGGACCCGGCGAAGGGCT---GGCAG 52571 || ||| ||| || |||||||| |||||||| | || ||||| | || | ||||| Sbjct 46428 GATGTCGTCGCCGAGCTCGGCAGCGCGATCTTCCGCGATCCGGCTGACGGTTCATGGCAG 46487 Query 52572 ACGTCCGACGCGTACCTGTCGGGTAACGTCGTGCG-CAAACTCGCCGAGGCGCAGGCCGC 52630 ||| | ||||| || ||||| || ||| | ||| ||| ||| ||| | || || Sbjct 46488 ACGGCGGACGCCTATCTGTCAGGCCCCGT-GCGCGACAAGCTCAAAACGGCAGAAGCGGC 46546 Query 52631 GGCGCGCAG-CGACCGCA-AGTACCAGCGCAACGTCGAGGCACTGCTGGCCGTGCAGCCG 52688 ||| |||| |||| ||| ||||| ||||||| ||| || |||| | ||| ||||| Sbjct 46547 GGC-CGCACTCGAC-GCAGAGTACGAGCGCAATGTCACTGCGCTGCAAGGCGTCCAGCCC 46604 Query 52689 AAGCCG--CTCGGCCCGAGCGACATCACGGTGAAGCTGGGCCAGAACTGGATTCCGGCGG 52746 |||| ||| ||||| ||||||||||| | ||| ||| | ||||| ||||| | Sbjct 46605 --GCCGATCTCAGCCCGTCCGACATCACGGCGCGGCTCGGCGCGCCATGGATCCCGGCCG 46662 Query 52747 CCGACGTCGCCGTGTTCG 52764 |||| ||| || |||| Sbjct 46663 CCGATATCGTCGCTTTCG 46680 >seq24987 Length=52459 Score = 233 bits (258), Expect = 8e-57 Identities = 1334/2093 (64%), Gaps = 77/2093 (4%) Strand=Plus/Plus Query 52994 GCAGAAGATGCGCGCGGCTTTCGCGCGCTGGATTTGGACGGACACGAAGCGCGCCGACCG 53053 ||||||||| | || ||| ||||||||| ||| | || | | || | ||||| Sbjct 48374 GCAGAAGATCAAGGACGCCTTCCAGCGCTGGATCTGGTCCGATCCCGATCGGACGGACCG 48433 Query 53054 GCTCGTCAACTACTACAACGAGAACTTCAACAACATCGCGCCGCGCCAGTTCGACGGCTC 53113 ||| | ||||||||| |||||||||||||||||| || |||||||| || Sbjct 48434 GCTGGCGCGGGTCTACAACGACCGCTTCAACAACATCGCGCCTCGTGCCTTCGACGGGTC 48493 Query 53114 GCACCTGACGCTGCCGGGCGTATCGCTGCGCTTCGAC-CTGCGCGAGAACCAGAAGCGCG 53172 || |||| ||| ||||||| || |||| | || || | | |||||||||||| Sbjct 48494 CCATCTGAAGCTCCCGGGCGCCTCTG-GCGCCTTTACTCTTTATGGGCACCAGAAGCGCG 48552 Query 53173 CCATCTGGCGCGGCATTCAGGAAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGGCA 53232 |||||||||| | | || ||| | || ||||| ||||| |||||||| |||| Sbjct 48553 GCATCTGGCGCATCGTCTCGGCGGGCTCGACCTATCTCGCCCACGCGGTCGGCGCTGGCA 48612 Query 53233 AGACGTTCACGATGATCGCGACGGGCATGGAGGAGCGTCGGCTCGGCCTGTCCAACAAGC 53292 |||| | || ||| || | ||||||| |||| ||||||||||| | |||| Sbjct 48613 AGACCATGACCATGGCGGCCGCCATCATGGAGCAGCGCAGGCTCGGCCTGATCGCCAAGG 48672 Query 53293 CGATGTACGCGGTGCCGAACCACATGCTCGCGCAATTCGCGCGCGAGTTCCTTGAGCTGT 53352 ||||| | ||||| ||| || ||||| || ||||||||||| | ||| | Sbjct 48673 CGATGCTGGTCGTGCCCGGCCATTGCCTGGCGCAGGCTGCCCGCGAGTTCCTGGCGCTCT 48732 Query 53353 ACCCGGCCGCGAACATCATGGTCGCGGACGAGCAGAATTTCCACACCCACAACCGCCGCC 53412 | ||| |||| ||| | ||||| |||||| |||||| || |||| || | | Sbjct 48733 ATCCGAACGCGCGCATTCTCGTCGCCGACGAGACCAATTTCACCAAGGACAAGCGGCAGC 48792 Query 53413 GGTTCGTCGCGCAGGCCGCGCTCAACAAC-CCGGACGCGATCATCATCACGCACTCGGCG 53471 | || | ||| ||||||| | | || ||||||||||||||||||||| |||||| Sbjct 48793 GCTTTCTGTCGCGGGCCGCG-ACGGCGACATGGGACGCGATCATCATCACGCATTCGGCG 48851 Query 53472 TTCGGCCGCATCGGCATGTCCGAC-GAGTACGCCTCGGCGTTCATCCGCGACCAGATCGA 53530 ||| | ||||||| || ||| | | | || | | |||| ||| | | || Sbjct 48852 TTCCGTTTCATCGGCGTG-CCGTCAGCCTTCGAGCAGCAAATGATCCAGGACGAACTGGA 48910 Query 53531 CGAGTGGAAAGCCGCGCTCGACGAGACGGACAAGGGCGACCGCATCACGCGCAAGCAGAT 53590 | || || ||| | || || | | |||||| || ||||||||| | | Sbjct 48911 GCTTTACGAAACCTTGCTGACCAAGGTCGAAAGCGACGACCGTGTCTCGCGCAAGCGGCT 48970 Query 53591 CGAGCGCCGCATCGNNNNNNNNNNNNNNNNGCTGGAGGCGAAACAGGGCGGCGAGAAGAA 53650 ||| || | | |||||| || | || | | || Sbjct 48971 CGAACGGTTGAAGGAGGGCCTGAAAGAGCGGCTGGAATCG----CTGTCGACCCG--CAA 49024 Query 53651 GGACAAGGTGCTGTCGTTCGAGGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCA 53710 |||| | | ||| | || ||| | |||||||||| | ||||||||||| || Sbjct 49025 GGACGATCTTCTGACCATCTCCGAGATCGGCGTCGACCAGATCATCGTCGACGAGGCGCA 49084 Query 53711 CGAGTTCCGAAAACTCGACTTCGCGACGCAGCAGAGCAACATCAAGGGCATCGACCCGGC 53770 |||||| | || ||| ||||||||| | ||||| | | ||||| |||| ||| Sbjct 49085 GGAGTTCAGGAAGCTCAGCTTCGCGACCAATATGAGCACCTTGAAGGGTGTCGATCCGAA 49144 Query 53771 GGGCTCGCAGCGCGCGATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCC 53830 |||||||||||||| |||||| | ||||| | | | | | ||| || || Sbjct 49145 CGGCTCGCAGCGCGCCTGGGACCTTTATGTGAAGTCGCGCTTCATCGAGACCAAAAACCC 49204 Query 53831 GGGCCGCGCGCTCGTGGCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTA 53890 ||||| ||||| ||| ||| |||||||| ||| |||| |||||| | |||||| | | Sbjct 49205 CGGCCGGGCGCTGGTGCTCGCCTCCGGCACCCCGATCACCAACACGCTCGGCGAGATGTT 49264 Query 53891 CACCGCACAACGCT-TCT---TCCAGCCCGAGCAGCTTGCCGAGGATGGTCTGGATACGT 53946 | | | || |||| ||| | ||| || |||| ||| || ||| | | Sbjct 49265 CTCGGTGCAGCGCTATCTCGGTTACGCC---GC-GCTTCTCGATCGCGGCCTGCACGAAT 49320 Query 53947 TCGACGCGTGGGCCAACCAATACGGTGACATCGTTG--CGGGCTTCGAGCAGAACGCCG- 54003 | ||||| |||||| | ||| || || | | || || |||||| | |||| Sbjct 49321 TTGACGCCTGGGCCTCGACGTTCGGCGATGTC-TCGACCGAGC-TCGAGCTCCA-GCCGT 49377 Query 54004 CCGGCGGCTACGAGGTCGTGAGCCGGTTCGCGAAGTTCCAGAACGTGCCCGAGCTGATGC 54063 ||||| || || ||||| || ||||| | ||| || ||||| |||||||| | Sbjct 49378 CCGGCAAATATAAGCCCGTGACGCGCTTCGCCACCTTCGTCAATGTGCCGGAGCTGAT-C 49436 Query 54064 GCCGCG-TGCGCTCGTTCATGGACATCCTGACGAGCCAGCAGCTCTCGCAGTACGTGGAT 54122 ||| | | ||||||||| |||| | ||||| | | || ||| |||||| | Sbjct 49437 GCCATGTTCCGCTCGTTCGCGGACGTGGTGACGCCGGACGACCTGCGGCAATACGTGAAG 49496 Query 54123 CGTCCGGCGATCGAGGGCGGCGGCCGTCAGATCATGGTCACGCCGGAGCCGTTCGGATAC 54182 || |||||| | ||| | || |||||| || | | | | | | || | | Sbjct 49497 GTGCCTGCGATCTCGACCGGGCGGCGCCAGATCTTGACCTCCAGGCCGACCTCCGCCTTC 49556 Query 54183 AAGGCGTACCAGAAGGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGGCCG 54242 ||| |||||| | |||||| ||||||||| |||||| | || | | ||| Sbjct 49557 AAGCGCTACCAGGTGCTGCTCGACGAGCGCATCAAGGCGATCGAGATGCGTGATCGCCCG 49616 Query 54243 CCGCAGAAGGGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCCGCGATC 54302 ||| || || | ||||| | || ||| ||| | |||||||| | |||||| Sbjct 49617 CCGGAGCCCGGCGACGACATTCTGCTCTCCGTCATCACCGACGGCCGCCATGCGGCGATC 49676 Query 54303 GACATGCGCTTCGTCGA-CCCGACCGCGCCGAGCGACCCGAGCAGCAAGCTGAACCAGAT 54361 || ||||| | ||||| |||||| | | | ||||| | |||||| ||| | | Sbjct 49677 GATTTGCGCCTGGTCGATCCCGACAATGACAATGAGTCCGAG-AACAAGCTCAACAATCT 49735 Query 54362 GATCG---ACGCCGT---GATC--GCCGACTACCATGCGGCGTCCGACTTCGAGTATTCG 54413 |||| | ||| | ||| | | | ||| |||| | || | | || Sbjct 49736 CATCGCGAATGCCTTCCGCATCTGGAAGGCAACC--GCGGAAAACACCT----ATGTGCG 49789 Query 54414 -ACGAACGGCAA---GGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTTACCGACAT 54469 || ||||||| | |||| | | ||||| |||| || ||||| | || | Sbjct 49790 CCCGGACGGCAAACCGTTCGA---GCTTCCTGGCGCCGCGCAGATGATCTTCTCTGATCT 49846 Query 54470 CGGGCTCGGCGAGCAGTCGGCGAAGAACCGCGG--TTTCGACATGAAGGCGTGGAT-CGA 54526 | ||| || ||| || | ||||| |||||| | ||| | | | || ||||| || Sbjct 49847 C-GGCACGATCAGC-GT-TGAGAAGAGCCGCGGCTTCTCGGCCT-ATCGC-TGGATCCGT 49901 Query 54527 GAAGCGTCTGGTCGACGGCGGCATCCCGCGCGAGCAGATCGCGTTCATGCGCGACAACAA 54586 || | | || || | ||| ||||| | | | ||||| ||||||| ||| |||| Sbjct 49902 GACGAGCTTGTGCGTC-TTGGCGTCCCGGCCTCGGAAATCGCCTTCATGCAGGACTACAA 49960 Query 54587 GGAGCATGCCAAG--AAAGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCGTG 54644 | || | | ||| || |||||||||||| ||| |||||| ||||| | ||| | Sbjct 49961 GAAG--TCCGAAGCCAAGCAGCGCCTGTTCGGTGACGTGCGCGCCGGCAAGATCCGCTTC 50018 Query 54645 CTGATCGGCGGCAAGGAC---ATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACACC 54701 ||| ||||| | ||| |||| ||||| ||||| | |||| |||||| | | Sbjct 50019 CTGGTCGGCTCCTCCGACACGATGGGCACCGGTGTCAATGCGCAGCTGCGCCTGAAGGCG 50078 Query 54702 GAGGAGCATCTGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATC 54761 | | || || |||| ||| ||| | ||| | |||||||||| |||||||||||| Sbjct 50079 TTGCATCACCTCGACGTGCCATGGCTGCCGTCGCAGATCGAGCAGCGTGAGGGCCGCATC 50138 Query 54762 ATCCGTCAGGGCAACCAGAACAAGCAGGTGCGCATCCGCGCCTGGGCGA-CGAAGGGCAG 54820 | || |||||||| ||| || | | || ||| ||||| |||| |||||| | Sbjct 50139 GTGCGACAGGGCAATCAGCACGACGAAGTCGATATCTTCGCCTATGCGACCGAAGGCTCG 50198 Query 54821 CTACGACTCCACCATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCGCT 54880 || || |||| |||||| || || | ||||| || || ||||||| |||||| Sbjct 50199 CT-TGATGCCACGATGTGGCAGAACAATGAGCGCAAAGCTCGTTTCATCGCCGCGGCGCT 50257 Query 54881 CAACGGCGACGACAGCG-TGCGCTCGCTCGAGGACGTGTCCGAGGCATCGGC------AT 54933 |||||| || || | || ||| || ||| || ||| | ||| | Sbjct 50258 GTCGGGCGAC-ACCTCGATTCGTCGGCTGGAAGACCTGGGCGAAGGCCAGGCGAACCAGT 50316 Query 54934 TCGACATGGCCGCCGCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCTGGCGGGCCTGA 54993 ||| ||||||| ||| | || || |||||| |||| ||| || ||| || | Sbjct 50317 TCGCCATGGCCAAGGCGATCGCCTCAGGCGACCCGCGCCTGATGCAGAAGGCCGGATTAG 50376 Query 54994 AGGCCGACGTCGAGCGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAG 55046 ||||||| ||| |||||||| || || | ||| || |||||| ||| Sbjct 50377 AGGCCGATATCGCACGGCTGGAACGTTTGCGTGCCGCCCATGTCGACGATCAG 50429 >seq24986 Length=52538 Score = 158 bits (174), Expect = 5e-34 Identities = 324/477 (68%), Gaps = 6/477 (1%) Strand=Plus/Minus Query 53010 GCTTTCGCGCGCTGGATTTGGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTAC 53069 || ||| ||||||||| ||| | || || | ||| |||| || | | | ||| Sbjct 15965 GCCTTCCAGCGCTGGATCTGGTCCGATCCGGATCGCACCGATCGTTTGGCGCGCGTCTAT 15906 Query 53070 AACGAGAACTTCAACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCG 53129 ||||| |||||||||||||||||| || ||||| ||||| || || | || ||| Sbjct 15905 AACGACTGCTTCAACAACATCGCGCCACGAGCCTTCGATGGCTCCCATCTAAGACTTCCG 15846 Query 53130 GGCGTATCGCTGCGC-TTCGACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCAT 53188 |||| || |||| || | ||| | | ||||||| |||| |||||||||| | | Sbjct 15845 GGCGCCTCTG-GCGCCTTTGTCCTTTATGGGCACCAGAAACGCGGCATCTGGCGCATCGT 15787 Query 53189 TCAGGAAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGAT 53248 || || | || ||||| ||||| |||||||| |||||||| | |||||| Sbjct 15786 CTCGGCCGGATCGACCTATCTCGCCCACGCCGTCGGCGCCGGCAAGACCATGACGATGGC 15727 Query 53249 CGCGACGGGCATGGAGGAGCGTCGGCTCGGCCTGTCCAACAAGCCGATGTACGCGGTGCC 53308 || | | |||||| |||| |||||||| ||| | |||| ||||| || ||||| Sbjct 15726 GGCCGCCGTCATGGAACAGCGCCGGCTCGGGCTGATCGCCAAGGCGATGCTCGTTGTGCC 15667 Query 53309 GAACCACATGCTCGCGCAATTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACAT 53368 ||| || ||||| |||||||| || || | ||| || ||| |||| || Sbjct 15666 CGGCCATTGCCTTGCGCAGGCGGCGCGCGAATTTCTCGCGCTCTATCCGAACGCGCGGAT 15607 Query 53369 CATGGTCGCGGACGAGCAGAATTTCCACACCCACAACCGCCGCCGGTTC--GTCGCGCAG 53426 |||||||||||||| |||||| | |||| || | ||| ||| ||||||| Sbjct 15606 ACTGGTCGCGGACGAGACCAATTTCACGAAGGACAAGCGACACCGCTTCCTGTCGCGC-- 15549 Query 53427 GCCGCGCTCAACAACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGCCGCATC 53483 || ||| | | |||||||||||| ||||| || ||||| ||| || |||| Sbjct 15548 GCGGCGACCGCGACGTGGGACGCGATCATTATCACCCATTCGGCCTTCCGCTTCATC 15492 Score = 131 bits (144), Expect = 7e-26 Identities = 331/497 (67%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 54562 AGATCGCGTTCATGCGCGACAACAAGGAGCATGCCAAGA-AAG-AGCGCCTGTTCGCGGA 54619 ||||||| ||||||| ||| ||||| | || | | | ||| ||||||| |||| || Sbjct 14419 AGATCGCCTTCATGCAGGACTACAAGAA--ATCCGAGGCGAAGCAGCGCCTCTTCGGCGA 14362 Query 54620 CATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGACA---TGGAAACCGGCGT 54676 | |||| | || || ||| | ||||||||| |||| ||| ||||| || Sbjct 14361 CGTGCGTGCCGGAAAGGTCCGCTTCCTGATCGGCTCGTCCGACACGATGGGGACCGGTGT 14302 Query 54677 CAACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCATC 54736 || | |||| ||| ||| | || | | || || |||| || ||| | ||| | Sbjct 14301 GAATGCGCAGTTGCGACTCAAGGCCCTGCATCACCTCGACGTCCCCTGGCTGCCGTCGCA 14242 Query 54737 CGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAAGCAGGTGCGCAT 54796 ||||||||||||||||||||||| | || |||||||||||| || | |||| || Sbjct 14241 AATCGAGCAGCGCGAGGGCCGCATCGTGCGGCAGGGCAACCAGCACGATGAGGTCGATAT 14182 Query 54797 CCGCGCCTGGGCGACGAAGGGCAGCTACGACTCCACCATGTGGGGGATGAACGCCCGCAA 54856 | ||||| || || | |||||| |||| | |||||| || || | ||||| Sbjct 14181 CTTCGCCTATGCCACTGAAGGCAGCCTCGACGCGCAGATGTGGCAGAACAATGAGCGCAA 14122 Query 54857 GGCGCGGTTCATCGAACAGGCGCTCAACGGCGACGACAGCG-TGCGCTCGCTCGAGGACG 54915 ||| || ||||||| ||||| |||||| || || | || | | ||||| Sbjct 14121 GGCCCGCTTCATCGCGGCCGCGCTGTCGGGCGAC-ACCTCGATCCGACGGTTGGAGGATA 14063 Query 54916 TGTCCGAGGCATCGGC------ATTCGACATGGCCGCCGCGCTGGCGTCGGGCGACGAGC 54969 || ||||| ||| |||| ||||||| ||| | |||||||||||||||| Sbjct 14062 TGGGCGAGGGCCAGGCCAACCAGTTCGCCATGGCCAAGGCGATTGCGTCGGGCGACGAGC 14003 Query 54970 GCTACATGAAGCTGGCGGGCCTGAAGGCCGACGTCGAGCGGCTGGAGCGCCTGAGCTACG 55029 | |||| | || || ||| | |||||| ||| |||||| || || || || || Sbjct 14002 GGCTCATGCAAAAAGCAGGACTGGAAGCCGACATCGCGCGGCTCGAACGTCTCCGCGCCG 13943 Query 55030 CGCACCACGACGACCAG 55046 | || |||||| ||| Sbjct 13942 CTCATATCGACGATCAG 13926 Score = 91.5 bits (100), Expect = 6e-14 Identities = 158/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 51423 CTTCACGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAGCCGGGCGGCATGCTCGTG 51482 || || || |||||| | || | ||||||||| | ||||||| |||| ||||| | Sbjct 17597 CTGCATGATTACTTCATTGCACGGGCCATCGACCTCTTGAAGCCCGGCGC---GCTCGCG 17541 Query 51483 ---TTCGTCACCAGCAAGGGCACGATGGATAAGGCGAGCGACCGGGCACGCAAGTACCTC 51539 ||||| |||||| |||||||||||| |||||| || | ||| ||| || || || Sbjct 17540 GCCTTCGTGACCAGCGCGGGCACGATGGACAAGGCGGACGCCTCGGCTCGCGAGCACATC 17481 Query 51540 GCCGACCGCGCCAACCTGATCGGCGCCGTGCGGCTG-CCGCAGACCGCGTTCAAAGACAA 51598 || | ||| | ||||||| ||| | || ||| ||| || | || ||| | | Sbjct 17480 GCGAAGTCAGCCGATCTGATCGCGGCCATCCGCCTGCCCGAAGGCAGC-TTCCGCGCCCG 17422 Query 51599 CGCCGGCACGGAAGTCGTGACCGACGTGCTGTTCCTCCAGAAGCGC 51644 |||||||||||| ||||| ||| | || || ||| ||||||| Sbjct 17421 CGCCGGCACGGATGTCGTCGTCGATATTCTCTTTTTCCGGAAGCGC 17376 Score = 82.4 bits (90), Expect = 3e-11 Identities = 195/291 (67%), Gaps = 4/291 (1%) Strand=Plus/Minus Query 53672 GGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAGTTCCGAAAACTCGACTT 53731 |||| | |||||||||| | |||||||||| || ||||| || || || ||| Sbjct 15309 GGAGATCGGCGTCGACCAGATCATCGTCGACGAAGCGCAGGAGTTTCGTAAGCTTTCCTT 15250 Query 53732 CGCGACGCAGCAGAGCAACATCAAGGGCATCGACCCGGCGGGCTCGCAGCGCGCGATGGA 53791 ||| ||| | | | | |||||| |||| ||| || ||||||||||| ||| Sbjct 15249 CGCCACGAATATGTCGACGCTGAAGGGCGTCGATCCGAACGGTTCGCAGCGCGCCTGGGA 15190 Query 53792 CCTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCCGGGCCGCGCGCTCGTGGCCGC 53851 ||||| | || || | | | || || || ||||| |||||||| ||| ||| Sbjct 15189 TTTGTTCGTCAAATCCCGTTTCATCGACATGAAAAATCCGGGTCGCGCGCTGGTGCTCGC 15130 Query 53852 GTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCACAACGCT-TCTTCC 53910 |||||||| ||| | |||||||| | |||||| | | | | | || |||| ||| | Sbjct 15129 CTCCGGCACACCGATTACGAACACACTCGGCGAGATGTTCTCGGTCCAGCGCTATCT--C 15072 Query 53911 AGC-CCGAGCAGCTTGCCGAGGATGGTCTGGATACGTTCGACGCGTGGGCC 53960 || || | ||| |||| |||||| | ||||||||| |||||| Sbjct 15071 GGCTACGCGGCGCTCAGCGAGCGCGGTCTGCACGAGTTCGACGCCTGGGCC 15021 >seq47259 Length=37638 Score = 109 bits (120), Expect = 2e-19 Identities = 186/265 (70%), Gaps = 10/265 (4%) Strand=Plus/Minus Query 53066 CTACAACGAGAACTTCAACAACATCGCGCCG--CGCCAGTTCGACGGCTCGCACCTGACG 53123 ||||||||| || ||||||| | |||| | |||||| ||||||||| ||||| | Sbjct 35300 CTACAACGAAAAGTTCAACACC--CGCGTCAACCGCCAGCACGACGGCTCCCACCTCGCC 35243 Query 53124 CTGCCGGGC---GTATCGC-TGCGCT--TCGACCTGCGCGAGAACCAGAAGCGCGCCATC 53177 || || ||| || || || | | || | || ||| |||||||| ||| | Sbjct 35242 CTCCCCGGCAAGGTCCCGGATGAGGTGATCAAGCTCCGCCGCCACCAGAAGAACGCTGTG 35183 Query 53178 TGGCGCGGCATTCAGGAAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACG 53237 ||||||||||| | || || ||| |||| |||| |||||||| |||||||| Sbjct 35182 TGGCGCGGCATCTACGAGCGCTTCATGCTGCTCGACCACGTCGTCGGCGCCGGCAAGACC 35123 Query 53238 TTCACGATGATCGCGACGGGCATGGAGGAGCGTCGGCTCGGCCTGTCCAACAAGCCGATG 53297 ||||| ||||||| | |||||| ||| ||| | ||||||||| |||||| ||| Sbjct 35122 TTCACCGCGATCGCGCGCGTGATGGAGCGGCGGCGGATGGGCCTGTCCCGCAAGCCCATG 35063 Query 53298 TACGCGGTGCCGAACCACATGCTCG 53322 || |||||||||||| || ||| Sbjct 35062 ATCGTGGTGCCGAACCATCTGGTCG 35038 >seq56171 Length=386068 Score = 86.0 bits (94), Expect = 2e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 8258 ACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAG 8317 || ||||| |||||||||||||| |||||| || | | ||||| || |||| |||| || Sbjct 385469 ACCTGGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATAGGTGCAAG 385528 Query 8318 CGTATCGTGAGTTCGAATCTCACCGCCTCCGCCAG 8352 | ||||| | ||||||||| | || ||||||||| Sbjct 385529 CCTATCGGGGGTTCGAATCCCTCCCTCTCCGCCAG 385563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197655527681436