Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_019519.1 Length=69391 Score E Sequences producing significant alignments: (Bits) Value seq30610 84.2 1e-11 >seq30610 Length=171584 Score = 84.2 bits (92), Expect = 1e-11 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 11713 CATGTACGTTTCGAGAATTGTTTCTTCTTCAAGGCGCTCATTCGCATCTTTTTTACGAAT 11772 |||||| ||||| || || || || | ||| | ||||| | || || | || || || Sbjct 83281 CATGTAGGTTTCCAGGATCGTCTCCTGTTCCTGACGCTCGTCGGCGTCCTGCTTGCGCAT 83340 Query 11773 GCCGATGATTTTGCGAATCGCCTTGGTATCGTAGCCGCGACCCTTGGCTTCACTCAT-GA 11831 || ||| || |||| | ||||||| ||| ||||| ||||||||||||| ||| || Sbjct 83341 GCGGATAATGGTGCGCAGCGCCTTGACGTCGAAGCCGTTGCCCTTGGCTTCAC-CATAGA 83399 Query 11832 CGTCTTTGATATCG-CCCTGAATAGCTGCTTTTTCTTCTTCAAGGCGCTCGACGCGCTCA 11890 |||| ||||| ||| | |||| || | || ||||| || || ||||| |||||| Sbjct 83400 CGTCCTTGATGTCGTCGCTGATGGTCTTC-TTCTCTTCCTCCAGCTTCTCGATGCGCTCG 83458 Query 11891 ATGA 11894 |||| Sbjct 83459 ATGA 83462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 221772928323824