Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq34751 84.2 6e-12 >seq34751 Length=230815 Score = 84.2 bits (92), Expect = 6e-12 Identities = 183/271 (68%), Gaps = 5/271 (2%) Strand=Plus/Plus Query 27131 CTTGCCATGGACGCTCAGCCCGGCCTGGTAACCGTCAGCAA-CTCCGGCATCCCGGCGTT 27189 || || |||||||| ||||||| ||| |||| | |||| | ||||||||||| ||| Sbjct 128292 CTCGCGATGGACGCGCAGCCCGATCTGCAGACCG-CGGCAAACGCCGGCATCCCGTCGTG 128350 Query 27190 CCTGACCACCTACATCGACCCGAAAATGATCGAGGTACTGGTTGCCCCGATCAAGGCAGC 27249 |||||||| | |||||| ||| || ||| | ||| | || |||| | || || Sbjct 128351 GCTGACCACGTTCATCGATCCGGCCATCTACGACATCCTGTTCGCGCCGACGCAAGCCGC 128410 Query 27250 CGAGGCAGTCGGTTCCGAGGTGAAGAAAGGCGACTGGATCACCGAAACCGCCATGTTCCC 27309 ||| | |||| ||||| || |||||||||| || | ||||| ||||||| Sbjct 128411 CGAAGTCATCGG---CGAGGAACGCAAGGGCGACTGGACGACGCAGACCGCGATGTTCCA 128467 Query 27310 GGTTGTGGAATCCACCGGCCAGACCGCTGCATATGGTGACTACAACAACTCCGGCTCCAC 27369 | || ||| ||||| | || | | || || || | |||| | |||| | | Sbjct 128468 GACCGTCGAACACACCGTCGAGGTGTCGACCTACGGCGATTTCAACGAAAACGGCCGCGC 128527 Query 27370 CGGCGTGAACACCAACTTCCCGCAGCGCCAG 27400 ||| |||||||||| || ||||||||| Sbjct 128528 ATCCGTCAACACCAACTGGCCCCAGCGCCAG 128558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139147777443452