Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq36931 98.7 3e-16 >seq36931 Length=650932 Score = 98.7 bits (108), Expect = 3e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 1131 CCTGGATTGGGTGATCGTAGGTGGCGAAAGCGGCCATGGCGCCAGGCCCATGAACCCTAC 1190 ||| ||||||||||| | || ||||||||||||| || || | | ||| | || Sbjct 421917 CCTCGATTGGGTGATTGCCGGCGGCGAAAGCGGCCGTGAGGCGCGATCAATGCATCCCGA 421976 Query 1191 GTGGGCGCGATTCCTGCGCGATCAGTGCGAAGCCGCTGGCGTGCCTTTCCTGTTCAAGCA 1250 |||||||||| |||||||||||||| | ||||| |||||| ||| | |||||||| Sbjct 421977 TTGGGCGCGATCGCTGCGCGATCAGTGTCACGCCGCCAACGTGCCGTTCTTCTTCAAGCA 422036 Query 1251 GTGGGGCGAATGGG 1264 |||||||| |||| Sbjct 422037 ATGGGGCGAGTGGG 422050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137267445286700