Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq47259 98.7 2e-16 >seq47259 Length=37638 Score = 98.7 bits (108), Expect = 2e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 4199 AGCTTGTTGCCCTGGCGAATGATACGACCTTCACGCTGTTCAAGGTCAGAAGGCCGCCAT 4258 ||||||||||||||||| ||||| || ||||| ||||| || | ||| || ||| ||| Sbjct 33411 AGCTTGTTGCCCTGGCGGATGATGCGGCCTTCGCGCTGCTCGATGTCGGAGGGCTTCCAC 33470 Query 4259 GGTGCATCCATGTGGTGTAGCGCAACAAGGCGCTCCTGCACGTTCATGCCGGCGCCCAT 4317 | | || ||||| || || ||||| |||||||||||||| ||||||||||||| Sbjct 33471 GTCACGTCGCCATGGTGGAGGGCGACAAGCCGCTCCTGCACGTTGGTGCCGGCGCCCAT 33529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123577475961776