Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq54943 84.2 2e-11 >seq54943 Length=275133 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 18127 ATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAA 18186 ||||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||| || Sbjct 238590 ATTCCTCGGTAGCTCAGCGGTAGAGCATTCGACTGTTAATCGAATGGTCGCTGGTTCGAA 238531 Query 18187 TCCTACCTGGGGAG 18200 ||| || |||||| Sbjct 238530 TCCAGCCCGGGGAG 238517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560849920824800