Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq54446 87.8 7e-13 >seq54446 Length=153271 Score = 87.8 bits (96), Expect = 7e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 ||||||||| ||| ||||||||||| || ||| |||| |||||||||| |||||||||| Sbjct 25688 TGGTTGCGGGGGCAGGATTTGAACCTACGACCTTCAGGTTATGAGCCTGACGAGCTACCG 25747 Query 50168 AACTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 25748 GGCTGCTCTACCCCGC 25763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181480833720804