Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_023703.1 Length=64613 Score E Sequences producing significant alignments: (Bits) Value seq36931 123 1e-23 >seq36931 Length=650932 Score = 123 bits (136), Expect = 1e-23 Identities = 154/204 (75%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 38845 GACGTATGGACTGATATTC-CGCCGATAAACTCGC--GCGCAGCCGAACGTCTCGGTTAT 38901 ||||| ||||| |||||| |||| || || |||| |||||| || || || |||||| Sbjct 472761 GACGTTTGGACCGATATTGACGCC-ATCAATTCGCAAGCGCAG--GAGCGACTAGGTTAT 472817 Query 38902 CCAACGCAAAAGCCGCTCGCTCTTCTGGAGAGAATCATCAAACTCACCACTGA-TCCGGG 38960 || || || |||||||| | || || ||| | || |||| | || || || ||| || Sbjct 472818 CCGACACAGAAGCCGCTATCACTACTTGAGCGCATTATCAG-CGCATCATCGAATCCCGG 472876 Query 38961 CGACGTCGTTTTGGATCCGTTCTGCGGCTGTGGAACCACTGTTGATGCCGCGCAGCGGCT 39020 ||| || |||||||| || ||||| || || || ||||||||||| ||||| || | || Sbjct 472877 CGATGTTGTTTTGGACCCTTTCTGTGGTTGCGGGACCACTGTTGAGGCCGCTGAGAGACT 472936 Query 39021 CGGCCGTCAATGGGTTGGTATCGA 39044 |||||||||||| | || ||||| Sbjct 472937 TGGCCGTCAATGGATCGGCATCGA 472960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 206493901741588