Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq27440 107 3e-18 >seq27440 Length=426762 Score = 107 bits (118), Expect = 3e-18 Identities = 145/201 (72%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || |||||||||||||| ||| || || | |||||||||||||| ||||||||| Sbjct 329300 CTGTCCTGTCAGCTCTATCAGCGCTCCGCCGACGTCTTCCTCGGCGTGCCCTTCAACATC 329359 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAAC---ATGGTGCCGGGC 198445 || || ||| | | ||| ||||| || |||||| | | || ||| ||| Sbjct 329360 GCCTCCTACTCGCTGCTCACCATGATGGTGGC---GCAGGTCACCGGTCTGAAGCCCGGC 329416 Query 198446 GATTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAG 198505 |||||| | || ||| ||| | |||||||| || || || ||||||||||| ||| Sbjct 329417 GATTTCGTGCATTCGTTCGGCGACGCGCATCTCTATTCCAACCACCTGGAGCAGGCGAAG 329476 Query 198506 CTCCAGCTGACGCGTGAGCCG 198526 |||||||| || || | |||| Sbjct 329477 CTCCAGCTCACCCGCGCGCCG 329497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768648030209360