Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq55950 109 5e-19 seq47552 107 2e-18 seq28750 107 2e-18 seq30200 105 6e-18 seq29731 104 2e-17 seq51632 102 7e-17 seq45692 100 2e-16 seq55485 98.7 8e-16 seq54758 98.7 8e-16 seq55903 96.9 3e-15 seq54362 96.9 3e-15 seq35820 96.9 3e-15 seq37185 93.3 4e-14 seq29098 93.3 4e-14 seq33136 86.0 5e-12 >seq55950 Length=6881 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||||| | |||| |||| |||||||| |||||| Sbjct 725 GTGGACTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTACCG 784 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| || || ||||| | ||||| || || |||||| | ||| Sbjct 785 GCGAAGATAAGACGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTC 844 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || ||||| || | || || || || || Sbjct 845 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTACCGGTGAGGGTC 904 Query 27231 TTCACAAAGATTTGCATA 27248 ||||| |||||||||||| Sbjct 905 TTCACGAAGATTTGCATA 922 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | || |||| || ||||| || || Sbjct 953 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTACGGCCGTCCTCAAGCTGCTTGCCA 1012 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| || || | ||||| || || |||||| | ||| Sbjct 1013 GCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTC 1072 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || || || | ||||| || || || Sbjct 1073 ACGTTCTCAATGGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTC 1132 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 1133 TTCACGAAGATTTGCAT 1149 >seq47552 Length=2045 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 1558 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTGCCG 1499 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| || || | ||||| || || |||||| | || Sbjct 1498 GCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 1439 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| ||| || || || || || || | ||||| || || || Sbjct 1438 ACGTTCTCGATAGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTAAGGGTC 1379 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 1378 TTCACGAAGATTTGCAT 1362 >seq28750 Length=3694 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||||| || | | || |||| |||||||| || || Sbjct 3564 GTGGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCA 3505 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| ||||| || || || || | |||||| || || |||||| | ||| Sbjct 3504 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTC 3445 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| ||||| || || || || | ||||| || || || Sbjct 3444 ACGTTCTCGATCGTGTCGCTGGACTCAACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTC 3385 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 3384 TTCACAAAGATCTGCAT 3368 >seq30200 Length=2978 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| |||| |||||||| ||||| Sbjct 2783 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCA 2724 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | ||||| || || |||||| | ||| Sbjct 2723 GCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 2664 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||| || || ||||| || | || || || || || Sbjct 2663 ACGTTCTCGATGGTGTCGCTCGATTCGACCTCGAGAGTAATCGTCTTACCGGTGAGGGTC 2604 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 2603 TTGACGAAGATTTGCATA 2586 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | || | ||| | || || || || ||||| ||||||||| Sbjct 2585 CCACCGCGCAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 2526 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| |||||||| || || ||| | ||||||||||| || || || || Sbjct 2525 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 2466 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| | |||| | | || | ||||| ||| || || Sbjct 2465 ATGCCCTCCTTGTCTTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCCACC 2406 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || ||||| ||||| ||||| Sbjct 2405 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 2359 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27085 TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACAC 27144 |||| |||| |||||||| || |||||| | ||||||||||| || || || || | | Sbjct 2977 TGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGC 2918 Query 27145 CCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTA 27204 |||| || || |||||| | |||| | | || | ||||| | | || || || | Sbjct 2917 CCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCCGAGCTCTCGACCTCGA 2858 Query 27205 GAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || |||| ||||| ||||| || || || ||||| |||||| Sbjct 2857 GGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATA 2814 >seq29731 Length=5296 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| |||| |||||||| ||||| Sbjct 4973 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCA 5032 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | |||||| || || |||||| | ||| Sbjct 5033 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTC 5092 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | ||||| ||||| || Sbjct 5093 ACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTC 5152 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 5153 TTGACGAAGATCTGCAT 5169 >seq51632 Length=2090 Score = 102 bits (112), Expect = 7e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27069 TTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGT 27128 ||||||||| || | || |||| |||||||| ||||||||| | ||||||||||| Sbjct 2 TTGTAGTCGGCCAGCGTACGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGC 61 Query 27129 TGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCT 27188 ||||| || || | |||||| || || |||||| | |||| | | || | ||||| Sbjct 62 TGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTGTCG 121 Query 27189 GTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || || || || || || | || || ||||| || ||||| ||||| ||||| Sbjct 122 CTGGACTCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 180 >seq45692 Length=9336 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| ||||| | || | || | || | || || || || |||||||||||||| Sbjct 4862 TTGCCGCCGCGGAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCA 4921 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | || |||| |||||||| || |||||| | ||||||||||| ||||| || Sbjct 4922 GCCAGCGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGG 4981 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||| || || |||||| | || | | | || | ||||| ||| || Sbjct 4982 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGCTGGACTCG 5041 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | ||||| ||||| || || || ||||| ||||| Sbjct 5042 ACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 5091 >seq55485 Length=2888 Score = 98.7 bits (108), Expect = 8e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| || ||||| ||||| Sbjct 35 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCA 94 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | |||||| || || |||||| | || Sbjct 95 GCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTG 154 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || || || | ||||| || || || Sbjct 155 ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 214 Query 27231 TTCACAAAGATTTGCATAGCTG 27252 ||||| ||||| ||||||| || Sbjct 215 TTCACGAAGATCTGCATAGTTG 236 >seq54758 Length=5143 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | || |||| |||||||| ||||| Sbjct 3586 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTACGGCCGTCCTCGAGCTGCTTACCA 3645 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | ||||| || || |||||| | || Sbjct 3646 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 3705 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| ||| || || || || || || | ||||| || || || Sbjct 3706 ACGTTCTCGATAGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTAAGGGTC 3765 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 3766 TTCACGAAGATTTGCAT 3782 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | | || |||| || ||||| |||||| Sbjct 3358 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCCAGCTGCTTACCG 3417 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | |||||| || || |||||| | || Sbjct 3418 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTG 3477 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || || || | || || ||||| || Sbjct 3478 ACGTTCTCGATGGTGTCGCTGGACTCTACCTCGAGGGTGATCGTCTTACCGGTCAGGGTC 3537 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 3538 TTGACGAAGATCTGCATA 3555 >seq55903 Length=2024 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || ||||| ||||||||| || | || |||| |||||||| ||||| Sbjct 950 CGTGGACTCCTTCTGAATGTTGTAGTCGGCCAGCGTACGGCCGTCCTCGAGCTGCTTACC 1009 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | ||||| ||||| ||||| || || | ||||| || || |||||| | || Sbjct 1010 AGCGAAGATGAGGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTT 1069 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||| | | || || || || || || | ||||| || || || Sbjct 1070 GACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATGGTCTTGCCGGTGAGGGT 1129 Query 27230 TTTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 1130 CTTCACGAAGATTTGCAT 1147 >seq54362 Length=8978 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||| | | |||| |||| |||||||| ||||| Sbjct 4817 CGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACC 4876 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | ||||||||||| || || || || | ||||| || || |||||| | || Sbjct 4877 AGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTT 4936 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| ||| || || || || || || | || || || || || Sbjct 4937 CACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATCGTCTTACCGGTGAGGGT 4996 Query 27230 TTTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 4997 CTTCACGAAGATCTGCAT 5014 >seq35820 Length=5258 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||| | | | || |||| || ||||| ||||| ||| | Sbjct 2 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAG 61 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||||||||| || || || || | |||||| || || |||||| | |||| | | Sbjct 62 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTC 121 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| ||| || || || || || || | ||||| ||||| || ||||| Sbjct 122 TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 181 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 182 AAGATCTGCAT 192 >seq37185 Length=1471 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| ||||||| || | || | || | || || || || || || |||||||| Sbjct 527 TTGCCACCGCGCAGACGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCA 468 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | | |||| |||| || ||||| || || ||| | ||||||||||| || || || Sbjct 467 GCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGA 408 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||| || || |||||| | |||| | | || | ||||| | | || Sbjct 407 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTCTCG 348 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || |||| ||||| ||||| || || || ||||| |||||| Sbjct 347 ACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATA 297 >seq29098 Length=1191 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||| |||||||| ||||| ||| | ||||||||||| || || || || | |||||| || Sbjct 1191 GTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTT 1132 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || |||||| | |||| | | || | ||||| ||| || || || || || || Sbjct 1131 GTCTTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGAT 1072 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| ||||| || ||||| ||||| ||||| Sbjct 1071 GGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1036 >seq33136 Length=388 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 |||| |||||||| || |||||| | ||||||||||| || || || || | |||||| | Sbjct 18 CGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCT 77 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || |||||| | || | | | || | ||||| | | || ||||| || || | Sbjct 78 TGTCTTGGATCTTCTGCTTGACGTTCTCGATCGTGTCCGAGCTCTCGACTTCGAGGGTGA 137 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | | || || ||||| || ||||| ||||| ||||| Sbjct 138 TGGTCTTACCGGTCAGCGTCTTCACGAAGATCTGCAT 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424640539537104