Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq42602 138 1e-27 seq38368 138 1e-27 seq38367 138 1e-27 seq30353 138 1e-27 seq52962 100 4e-16 >seq42602 Length=5458 Score = 138 bits (152), Expect = 1e-27 Identities = 853/1357 (63%), Gaps = 28/1357 (2%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || || |||||||| ||||||||||| || | ||| ||||| | ||||| || | | Sbjct 3547 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATGGAGGTG 3606 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482 ||||||| | || || ||||| ||| ||| | || || ||||| ||| || Sbjct 3607 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 3666 Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGA 110542 | || | || ||||| || |||| | | | || ||||| || || Sbjct 3667 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGATCTCCCACACGGTCTTG 3726 Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602 ||||| |||||||| || || ||||| || ||| ||||| || || | Sbjct 3727 TAGAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACTGAGCCGTTGTGCGAG 3786 Query 110603 ACCATGAGATCCTTCATATCCTTGG---ACCAGAGACCAATCTTCTTGAGGTCATTGACG 110659 || ||| | ||| | | || ||||||| || || || ||| || | Sbjct 3787 AC---GAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGA 3843 Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719 ||||||| |||||| | | || || || |||||| | | | | ||||||||| || Sbjct 3844 AGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGCGTGTAGATGTTGGTC 3903 Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 ||||| || |||||||| || || || |||| ||| || | ||| ||||| || ||||| Sbjct 3904 GTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATG 3963 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 || |||| | || ||| || || || | || ||||| | ||| || Sbjct 3964 GGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTGGGCGATGCTGGCGCGGAGCGTGGCC 4023 Query 110840 CAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGAC 110899 ||||| | || | | | | |||| | ||| ||| ||| || | |||| Sbjct 4024 CAGTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGAC 4083 Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG-- 110957 ||||| || ||||| |||| | |||| || | | | | || | || | ||| Sbjct 4084 GCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGGGCGAGCTC---GTTCGAG 4140 Query 110958 -CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA-TTCATCTCCTTGGCTTC 111015 | |||||| |||| || ||||| || ||||| | || || | ||| ||| || Sbjct 4141 GCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTC 4199 Query 111016 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075 || || | | |||||| | || || || || || || || || || || | Sbjct 4200 GTCGCTCTCCCACGGGTAGCGCATGATCATGAAGACGTCAGCCAGGCCCTGCACTCCGAT 4259 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATT 111132 ||| || || ||||| ||||| || || ||||| || ||| ||||| || | || Sbjct 4260 ACCGATGGGCCTGTGGCGCATGTTCGAGTTTCGGGC---CTCGGGCACGGGGTAGTAGTT 4316 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 |||| || || ||| || || ||||| || | ||| || || || || || | Sbjct 4317 GATGTCGATCACCTTGTTGAGGTTCTTGGTGACGACCTTCACGACGTCGTGCAGCTTCTT 4376 Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 | ||||| || || | | || || |||| || || |||| || || | || Sbjct 4377 GTGGTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCGAGGTT 4430 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 ||| || ||| ||| || ||||||| | | || || || | ||| || Sbjct 4431 GCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGA 4490 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || || || | | || ||||| ||| |||||| || |||||||| ||||| Sbjct 4491 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 4550 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGG 111432 ||||||||| || ||||| |||| || | ||| || || ||| | || ||| Sbjct 4551 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 4610 Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492 || | | | || || |||||| |||||| ||| | || ||||||| Sbjct 4611 GACCACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTT 4670 Query 111493 ACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 111552 ||| || ||| | ||||| || |||| || || ||||| || ||||| | || || Sbjct 4671 GCCCCACGAGTCAAACAGACCGGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCGCC 4730 Query 111553 TTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 111612 ||| || ||| ||||||| ||||| |||||||||||| | |||||||| | Sbjct 4731 CGACTCCACGCGCCTCATGAAGAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGC 4790 Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGT 111671 || ||| || | || ||||| || | | || ||||| || | || ||||||| Sbjct 4791 GCGGTTCTCCTCCTTGCCGTGGTT-CTTCTTCAGGTCGAGGAAGTCAAAAATGTCCGCGT 4849 Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708 |||| ||||| || |||| |||| | ||||| || Sbjct 4850 GCCAGGGCTCGAGGTAGATGGCGAAGGCGCCCTTGCG 4886 Score = 100 bits (110), Expect = 4e-16 Identities = 213/316 (67%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 || || || || ||| |||| ||||| | || |||| | | || || | ||||| || Sbjct 5112 CCGATGCCACCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 5171 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| ||||||||||| ||| || |||||||| || | |||||| | || || Sbjct 5172 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGAGAGCTGCGGACGCGGGGTG 5231 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || |||||||| || || || ||||| |||| | || |||| |||||| Sbjct 5232 CCGGCGTTGAAGAGCGTCGGAGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 5291 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | || | |||| ||| ||| | |||| || || ||||||| |||| Sbjct 5292 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGACAGCCACGCGCATGAGCATG 5351 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--TAGCTCTTCTCAAGGG 112133 | ||| ||| || | || |||| |||| || |||||| ||| ||| |||| Sbjct 5352 TGCTGGGGGCGCTCGACGATCTTGCCGTCGACCC--TGAAGAGGTAGGAGCGCTCGAGGG 5409 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 5410 TCTTGAAGCCAAAGTA 5425 >seq38368 Length=5470 Score = 138 bits (152), Expect = 1e-27 Identities = 853/1357 (63%), Gaps = 28/1357 (2%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || || |||||||| ||||||||||| || | ||| ||||| | ||||| || | | Sbjct 1912 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATGGAGGTG 1853 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482 ||||||| | || || ||||| ||| ||| | || || ||||| ||| || Sbjct 1852 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 1793 Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGA 110542 | || | || ||||| || |||| | | | || ||||| || || Sbjct 1792 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGATCTCCCACACGGTCTTG 1733 Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602 ||||| |||||||| || || ||||| || ||| ||||| || || | Sbjct 1732 TAGAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACTGAGCCGTTGTGCGAG 1673 Query 110603 ACCATGAGATCCTTCATATCCTTGG---ACCAGAGACCAATCTTCTTGAGGTCATTGACG 110659 || ||| | ||| | | || ||||||| || || || ||| || | Sbjct 1672 AC---GAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGA 1616 Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719 ||||||| |||||| | | || || || |||||| | | | | ||||||||| || Sbjct 1615 AGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGCGTGTAGATGTTGGTC 1556 Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 ||||| || |||||||| || || || |||| ||| || | ||| ||||| || ||||| Sbjct 1555 GTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATG 1496 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 || |||| | || ||| || || || | || ||||| | ||| || Sbjct 1495 GGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTGGGCGATGCTGGCGCGGAGCGTGGCC 1436 Query 110840 CAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGAC 110899 ||||| | || | | | | |||| | ||| ||| ||| || | |||| Sbjct 1435 CAGTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGAC 1376 Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG-- 110957 ||||| || ||||| |||| | |||| || | | | | || | || | ||| Sbjct 1375 GCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGGGCGAGCTC---GTTCGAG 1319 Query 110958 -CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA-TTCATCTCCTTGGCTTC 111015 | |||||| |||| || ||||| || ||||| | || || | ||| ||| || Sbjct 1318 GCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTC 1260 Query 111016 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075 || || | | |||||| | || || || || || || || || || || | Sbjct 1259 GTCGCTCTCCCACGGGTAGCGCATGATCATGAAGACGTCAGCCAGGCCCTGCACTCCGAT 1200 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATT 111132 ||| || || ||||| ||||| || || ||||| || ||| ||||| || | || Sbjct 1199 ACCGATGGGCCTGTGGCGCATGTTCGAGTTTCGGGC---CTCGGGCACGGGGTAGTAGTT 1143 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 |||| || || ||| || || ||||| || | ||| || || || || || | Sbjct 1142 GATGTCGATCACCTTGTTGAGGTTCTTGGTGACGACCTTCACGACGTCGTGCAGCTTCTT 1083 Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 | ||||| || || | | || || |||| || || |||| || || | || Sbjct 1082 GTGGTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCGAGGTT 1029 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 ||| || ||| ||| || ||||||| | | || || || | ||| || Sbjct 1028 GCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGA 969 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || || || | | || ||||| ||| |||||| || |||||||| ||||| Sbjct 968 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 909 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGG 111432 ||||||||| || ||||| |||| || | ||| || || ||| | || ||| Sbjct 908 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 849 Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492 || | | | || || |||||| |||||| ||| | || ||||||| Sbjct 848 GACCACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTT 789 Query 111493 ACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 111552 ||| || ||| | ||||| || |||| || || ||||| || ||||| | || || Sbjct 788 GCCCCACGAGTCAAACAGACCGGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCGCC 729 Query 111553 TTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 111612 ||| || ||| ||||||| ||||| |||||||||||| | |||||||| | Sbjct 728 CGACTCCACGCGCCTCATGAAGAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGC 669 Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGT 111671 || ||| || | || ||||| || | | || ||||| || | || ||||||| Sbjct 668 GCGGTTCTCCTCCTTGCCGTGGTT-CTTCTTCAGGTCGAGGAAGTCAAAAATGTCCGCGT 610 Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708 |||| ||||| || |||| |||| | ||||| || Sbjct 609 GCCAGGGCTCGAGGTAGATGGCGAAGGCGCCCTTGCG 573 Score = 100 bits (110), Expect = 4e-16 Identities = 213/316 (67%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 || || || || ||| |||| ||||| | || |||| | | || || | ||||| || Sbjct 347 CCGATGCCACCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 288 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| ||||||||||| ||| || |||||||| || | |||||| | || || Sbjct 287 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGAGAGCTGCGGACGCGGGGTG 228 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || |||||||| || || || ||||| |||| | || |||| |||||| Sbjct 227 CCGGCGTTGAAGAGCGTCGGAGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 168 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | || | |||| ||| ||| | |||| || || ||||||| |||| Sbjct 167 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGACAGCCACGCGCATGAGCATG 108 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--TAGCTCTTCTCAAGGG 112133 | ||| ||| || | || |||| |||| || |||||| ||| ||| |||| Sbjct 107 TGCTGGGGGCGCTCGACGATCTTGCCGTCGACCC--TGAAGAGGTAGGAGCGCTCGAGGG 50 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 49 TCTTGAAGCCAAAGTA 34 >seq38367 Length=4245 Score = 138 bits (152), Expect = 1e-27 Identities = 853/1357 (63%), Gaps = 28/1357 (2%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || || |||||||| ||||||||||| || | ||| ||||| | ||||| || | | Sbjct 1145 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATGGAGGTG 1204 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482 ||||||| | || || ||||| ||| ||| | || || ||||| ||| || Sbjct 1205 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 1264 Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGA 110542 | || | || ||||| || |||| | | | || ||||| || || Sbjct 1265 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGATCTCCCACACGGTCTTG 1324 Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602 ||||| |||||||| || || ||||| || ||| ||||| || || | Sbjct 1325 TAGAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACTGAGCCGTTGTGCGAG 1384 Query 110603 ACCATGAGATCCTTCATATCCTTGG---ACCAGAGACCAATCTTCTTGAGGTCATTGACG 110659 || ||| | ||| | | || ||||||| || || || ||| || | Sbjct 1385 AC---GAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGA 1441 Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719 ||||||| |||||| | | || || || |||||| | | | | ||||||||| || Sbjct 1442 AGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGCGTGTAGATGTTGGTC 1501 Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 ||||| || |||||||| || || || |||| ||| || | ||| ||||| || ||||| Sbjct 1502 GTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATG 1561 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 || |||| | || ||| || || || | || ||||| | ||| || Sbjct 1562 GGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTGGGCGATGCTGGCGCGGAGCGTGGCC 1621 Query 110840 CAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGAC 110899 ||||| | || | | | | |||| | ||| ||| ||| || | |||| Sbjct 1622 CAGTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGAC 1681 Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG-- 110957 ||||| || ||||| |||| | |||| || | | | | || | || | ||| Sbjct 1682 GCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGGGCGAGCTC---GTTCGAG 1738 Query 110958 -CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA-TTCATCTCCTTGGCTTC 111015 | |||||| |||| || ||||| || ||||| | || || | ||| ||| || Sbjct 1739 GCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTC 1797 Query 111016 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075 || || | | |||||| | || || || || || || || || || || | Sbjct 1798 GTCGCTCTCCCACGGGTAGCGCATGATCATGAAGACGTCAGCCAGGCCCTGCACTCCGAT 1857 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATT 111132 ||| || || ||||| ||||| || || ||||| || ||| ||||| || | || Sbjct 1858 ACCGATGGGCCTGTGGCGCATGTTCGAGTTTCGGGC---CTCGGGCACGGGGTAGTAGTT 1914 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 |||| || || ||| || || ||||| || | ||| || || || || || | Sbjct 1915 GATGTCGATCACCTTGTTGAGGTTCTTGGTGACGACCTTCACGACGTCGTGCAGCTTCTT 1974 Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 | ||||| || || | | || || |||| || || |||| || || | || Sbjct 1975 GTGGTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCGAGGTT 2028 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 ||| || ||| ||| || ||||||| | | || || || | ||| || Sbjct 2029 GCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGA 2088 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || || || | | || ||||| ||| |||||| || |||||||| ||||| Sbjct 2089 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 2148 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGG 111432 ||||||||| || ||||| |||| || | ||| || || ||| | || ||| Sbjct 2149 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 2208 Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492 || | | | || || |||||| |||||| ||| | || ||||||| Sbjct 2209 GACCACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTT 2268 Query 111493 ACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 111552 ||| || ||| | ||||| || |||| || || ||||| || ||||| | || || Sbjct 2269 GCCCCACGAGTCAAACAGACCGGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCGCC 2328 Query 111553 TTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 111612 ||| || ||| ||||||| ||||| |||||||||||| | |||||||| | Sbjct 2329 CGACTCCACGCGCCTCATGAAGAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGC 2388 Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGT 111671 || ||| || | || ||||| || | | || ||||| || | || ||||||| Sbjct 2389 GCGGTTCTCCTCCTTGCCGTGGTT-CTTCTTCAGGTCGAGGAAGTCAAAAATGTCCGCGT 2447 Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708 |||| ||||| || |||| |||| | ||||| || Sbjct 2448 GCCAGGGCTCGAGGTAGATGGCGAAGGCGCCCTTGCG 2484 Score = 100 bits (110), Expect = 4e-16 Identities = 213/316 (67%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 || || || || ||| |||| ||||| | || |||| | | || || | ||||| || Sbjct 2710 CCGATGCCACCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 2769 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| ||||||||||| ||| || |||||||| || | |||||| | || || Sbjct 2770 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGAGAGCTGCGGACGCGGGGTG 2829 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || |||||||| || || || ||||| |||| | || |||| |||||| Sbjct 2830 CCGGCGTTGAAGAGCGTCGGAGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 2889 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | || | |||| ||| ||| | |||| || || ||||||| |||| Sbjct 2890 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGACAGCCACGCGCATGAGCATG 2949 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--TAGCTCTTCTCAAGGG 112133 | ||| ||| || | || |||| |||| || |||||| ||| ||| |||| Sbjct 2950 TGCTGGGGGCGCTCGACGATCTTGCCGTCGACCC--TGAAGAGGTAGGAGCGCTCGAGGG 3007 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 3008 TCTTGAAGCCAAAGTA 3023 >seq30353 Length=5073 Score = 138 bits (152), Expect = 1e-27 Identities = 853/1357 (63%), Gaps = 28/1357 (2%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || || |||||||| ||||||||||| || | ||| ||||| | ||||| || | | Sbjct 3929 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATGGAGGTG 3870 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482 ||||||| | || || ||||| ||| ||| | || || ||||| ||| || Sbjct 3869 AGCTTGGCGAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 3810 Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGA 110542 | || | || ||||| || |||| | | | || ||||| || || Sbjct 3809 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGATCTCCCACACGGTCTTG 3750 Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602 ||||| |||||||| || || ||||| || ||| ||||| || || | Sbjct 3749 TAGAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACTGAGCCGTTGTGCGAG 3690 Query 110603 ACCATGAGATCCTTCATATCCTTGG---ACCAGAGACCAATCTTCTTGAGGTCATTGACG 110659 || ||| | ||| | | || ||||||| || || || ||| || | Sbjct 3689 AC---GAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGA 3633 Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719 ||||||| |||||| | | || || || |||||| | | | | ||||||||| || Sbjct 3632 AGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGCGTGTAGATGTTGGTC 3573 Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 ||||| || |||||||| || || || |||| ||| || | ||| ||||| || ||||| Sbjct 3572 GTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATG 3513 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 || |||| | || ||| || || || | || ||||| | ||| || Sbjct 3512 GGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTGGGCGATGCTGGCGCGGAGCGTGGCC 3453 Query 110840 CAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGAC 110899 ||||| | || | | | | |||| | ||| ||| ||| || | |||| Sbjct 3452 CAGTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGAC 3393 Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG-- 110957 ||||| || ||||| |||| | |||| || | | | | || | || | ||| Sbjct 3392 GCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGGGCGAGCTC---GTTCGAG 3336 Query 110958 -CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA-TTCATCTCCTTGGCTTC 111015 | |||||| |||| || ||||| || ||||| | || || | ||| ||| || Sbjct 3335 GCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTC 3277 Query 111016 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075 || || | | |||||| | || || || || || || || || || || | Sbjct 3276 GTCGCTCTCCCACGGGTAGCGCATGATCATGAAGACGTCAGCCAGGCCCTGCACTCCGAT 3217 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATT 111132 ||| || || ||||| ||||| || || ||||| || ||| ||||| || | || Sbjct 3216 ACCGATGGGCCTGTGGCGCATGTTCGAGTTTCGGGC---CTCGGGCACGGGGTAGTAGTT 3160 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 |||| || || ||| || || ||||| || | ||| || || || || || | Sbjct 3159 GATGTCGATCACCTTGTTGAGGTTCTTGGTGACGACCTTCACGACGTCGTGCAGCTTCTT 3100 Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 | ||||| || || | | || || |||| || || |||| || || | || Sbjct 3099 GTGGTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCGAGGTT 3046 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 ||| || ||| ||| || ||||||| | | || || || | ||| || Sbjct 3045 GCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGA 2986 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || || || | | || ||||| ||| |||||| || |||||||| ||||| Sbjct 2985 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 2926 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGG 111432 ||||||||| || ||||| |||| || | ||| || || ||| | || ||| Sbjct 2925 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 2866 Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492 || | | | || || |||||| |||||| ||| | || ||||||| Sbjct 2865 GACCACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTT 2806 Query 111493 ACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 111552 ||| || ||| | ||||| || |||| || || ||||| || ||||| | || || Sbjct 2805 GCCCCACGAGTCAAACAGACCGGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCGCC 2746 Query 111553 TTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 111612 ||| || ||| ||||||| ||||| |||||||||||| | |||||||| | Sbjct 2745 CGACTCCACGCGCCTCATGAAGAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGC 2686 Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGT 111671 || ||| || | || ||||| || | | || ||||| || | || ||||||| Sbjct 2685 GCGGTTCTCCTCCTTGCCGTGGTT-CTTCTTCAGGTCGAGGAAGTCAAAAATGTCCGCGT 2627 Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708 |||| ||||| || |||| |||| | ||||| || Sbjct 2626 GCCAGGGCTCGAGGTAGATGGCGAAGGCGCCCTTGCG 2590 Score = 100 bits (110), Expect = 4e-16 Identities = 213/316 (67%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 || || || || ||| |||| ||||| | || |||| | | || || | ||||| || Sbjct 2364 CCGATGCCACCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 2305 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| ||||||||||| ||| || |||||||| || | |||||| | || || Sbjct 2304 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGAGAGCTGCGGACGCGGGGTG 2245 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || |||||||| || || || ||||| |||| | || |||| |||||| Sbjct 2244 CCGGCGTTGAAGAGCGTCGGAGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 2185 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | || | |||| ||| ||| | |||| || || ||||||| |||| Sbjct 2184 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGACAGCCACGCGCATGAGCATG 2125 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--TAGCTCTTCTCAAGGG 112133 | ||| ||| || | || |||| |||| || |||||| ||| ||| |||| Sbjct 2124 TGCTGGGGGCGCTCGACGATCTTGCCGTCGACCC--TGAAGAGGTAGGAGCGCTCGAGGG 2067 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 2066 TCTTGAAGCCAAAGTA 2051 >seq52962 Length=211977 Score = 100 bits (110), Expect = 4e-16 Identities = 249/374 (67%), Gaps = 18/374 (5%) Strand=Plus/Plus Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509 || ||||| ||||| ||||| || | || ||| || | ||| || || || || Sbjct 111048 CGGTCAAAGCGACCAGGGCGTAGCAAAGCCGGATCCAGAACATCGGGACGGTTGGTAGCG 111107 Query 11510 GCAATAACCACAATGCCAGTCTCATTGTC---AAAGCCATCCATCTCGGTGAGTAATTGA 11566 |||| || | | ||| ||||| || |||||||||||| || | | ||| Sbjct 111108 GCAACAATAATTACGCCT---TCATTTTCTTCAAAGCCATCCATTTCCACCAAGAGTTGG 111164 Query 11567 TTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCC 11626 || | |||||| || | ||||||||| | | || |||| || || || Sbjct 111165 TTCAATGTTTGCTCGCGTTCATCATTTCCACCGCCAAGGCCCGCACCACGATGGCGTCCA 111224 Query 11627 ACCGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTC 11682 ||||||||||| ||||||||||| |||||||| || || |||| || | ||| Sbjct 111225 ACCGCATCAATTTCATCAATGAAAACAATACAGGGGGCATTCTTTTTAGCCTG----TTC 111280 Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGC 11742 || | ||| ||||| | ||||||| ||||| |||||||| |||||||||| | | Sbjct 111281 GAACATATCACGAACACGGCTGGCACCTACACCGACAAACATTTCCACAAAGTCAGATCC 111340 Query 11743 AGAGCACTG--GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800 || | || | ||| || ||||| | |||||| ||||| | ||| || | | ||| Sbjct 111341 TGA--AATGCTAAAGAAGGGCACATTGGCTTCACCTGCGATCGATCGAGCCAATAAAGTC 111398 Query 11801 TTTCCCGTACCTGG 11814 || ||||| || || Sbjct 111399 TTACCCGTTCCGGG 111412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627586552603200