Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq42602 159 4e-34 seq38368 159 4e-34 seq38367 159 4e-34 seq30353 159 4e-34 seq52962 141 1e-28 seq47808 113 5e-20 seq47532 113 5e-20 seq38762 113 5e-20 seq38761 113 5e-20 >seq42602 Length=5458 Score = 159 bits (176), Expect = 4e-34 Identities = 698/1091 (64%), Gaps = 24/1091 (2%) Strand=Plus/Minus Query 104597 CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 104656 || ||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 4886 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 4827 Query 104657 GAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 104716 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 4826 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 4767 Query 104717 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 104776 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 4766 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 4707 Query 104777 CCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACA 104836 || || |||| || ||||| | || | ||| ||||||| || | ||| Sbjct 4706 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 4647 Query 104837 AAGTACGAGGAAGAAGGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 104892 |||||| | || || || ||| | ||| ||| | || ||| || ||||| Sbjct 4646 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 4591 Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952 || || ||| |||| || | |||||| || || || |||||||| ||||| |||||||| Sbjct 4590 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 4531 Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012 ||| ||| || || || | | || ||| || || || || || || || Sbjct 4530 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 4471 Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 4470 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 4411 Query 105073 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 105132 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 4410 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 4357 Query 105133 GAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 105189 ||| |||||||| ||||| |||| || || || | || | |||||||| || Sbjct 4356 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 4297 Query 105190 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGC 105249 | || || || || || ||| | ||| | || || ||| |||| || ||||| || || Sbjct 4296 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 4240 Query 105250 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 105308 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 4239 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 4180 Query 105309 CGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGG 105368 ||| ||| || |||||||| || ||||||| || | || ||| | || ||| Sbjct 4179 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGCCTCGAACGAGCTCGCCCAGG 4121 Query 105369 TTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTT 105427 | || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 4120 TCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAGCCC 4062 Query 105428 GATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATC 105487 || | |||| | | | | | | ||||||| | ||| | ||||| Sbjct 4061 GACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGCATC 4002 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 || | || || || ||| |||||| |||| || ||||| || ||||| ||| | Sbjct 4001 GCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACCTCG 3942 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 || ||| |||| || || || |||||||| ||||||||||| |||||||| | | | Sbjct 3941 CAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGCCGC 3882 Query 105608 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 105667 | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 3881 ATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAGCGC 3822 Query 105668 GGTCTCTGGTC 105678 || |||||||| Sbjct 3821 GGCCTCTGGTC 3811 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||||||||| ||||| | || ||| |||| | || Sbjct 5360 CCCCCAGCACATGCTCATGCGCGTGGCTGTCGGTCTGCACAAGGACAACATCCCCGCCGT 5301 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| |||||| |||| || | |||| ||||| || || || ||||| Sbjct 5300 GATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACTCCGACGCTCTT 5241 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || | || || | || |||||||| || ||| |||||||| Sbjct 5240 CAACGCCGGCACCCCGCGTCCGCAGCTCTCGTCGTGCTTCCTGCTCACCATGAAGGAGGA 5181 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| | || ||||| | || || | | |||| || | ||||| |||| ||| || Sbjct 5180 CTCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGG 5121 Query 104461 GGGTATTGG 104469 || || || Sbjct 5120 TGGCATCGG 5112 >seq38368 Length=5470 Score = 159 bits (176), Expect = 4e-34 Identities = 698/1091 (64%), Gaps = 24/1091 (2%) Strand=Plus/Plus Query 104597 CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 104656 || ||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 573 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 632 Query 104657 GAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 104716 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 633 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 692 Query 104717 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 104776 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 693 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 752 Query 104777 CCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACA 104836 || || |||| || ||||| | || | ||| ||||||| || | ||| Sbjct 753 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 812 Query 104837 AAGTACGAGGAAGAAGGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 104892 |||||| | || || || ||| | ||| ||| | || ||| || ||||| Sbjct 813 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 868 Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952 || || ||| |||| || | |||||| || || || |||||||| ||||| |||||||| Sbjct 869 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 928 Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012 ||| ||| || || || | | || ||| || || || || || || || Sbjct 929 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 988 Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 989 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 1048 Query 105073 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 105132 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 1049 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 1102 Query 105133 GAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 105189 ||| |||||||| ||||| |||| || || || | || | |||||||| || Sbjct 1103 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 1162 Query 105190 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGC 105249 | || || || || || ||| | ||| | || || ||| |||| || ||||| || || Sbjct 1163 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 1219 Query 105250 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 105308 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 1220 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 1279 Query 105309 CGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGG 105368 ||| ||| || |||||||| || ||||||| || | || ||| | || ||| Sbjct 1280 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGCCTCGAACGAGCTCGCCCAGG 1338 Query 105369 TTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTT 105427 | || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 1339 TCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAGCCC 1397 Query 105428 GATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATC 105487 || | |||| | | | | | | ||||||| | ||| | ||||| Sbjct 1398 GACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGCATC 1457 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 || | || || || ||| |||||| |||| || ||||| || ||||| ||| | Sbjct 1458 GCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACCTCG 1517 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 || ||| |||| || || || |||||||| ||||||||||| |||||||| | | | Sbjct 1518 CAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGCCGC 1577 Query 105608 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 105667 | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 1578 ATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAGCGC 1637 Query 105668 GGTCTCTGGTC 105678 || |||||||| Sbjct 1638 GGCCTCTGGTC 1648 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||||||||| ||||| | || ||| |||| | || Sbjct 99 CCCCCAGCACATGCTCATGCGCGTGGCTGTCGGTCTGCACAAGGACAACATCCCCGCCGT 158 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| |||||| |||| || | |||| ||||| || || || ||||| Sbjct 159 GATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACTCCGACGCTCTT 218 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || | || || | || |||||||| || ||| |||||||| Sbjct 219 CAACGCCGGCACCCCGCGTCCGCAGCTCTCGTCGTGCTTCCTGCTCACCATGAAGGAGGA 278 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| | || ||||| | || || | | |||| || | ||||| |||| ||| || Sbjct 279 CTCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGG 338 Query 104461 GGGTATTGG 104469 || || || Sbjct 339 TGGCATCGG 347 >seq38367 Length=4245 Score = 159 bits (176), Expect = 4e-34 Identities = 698/1091 (64%), Gaps = 24/1091 (2%) Strand=Plus/Minus Query 104597 CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 104656 || ||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 2484 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 2425 Query 104657 GAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 104716 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 2424 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 2365 Query 104717 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 104776 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 2364 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 2305 Query 104777 CCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACA 104836 || || |||| || ||||| | || | ||| ||||||| || | ||| Sbjct 2304 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 2245 Query 104837 AAGTACGAGGAAGAAGGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 104892 |||||| | || || || ||| | ||| ||| | || ||| || ||||| Sbjct 2244 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 2189 Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952 || || ||| |||| || | |||||| || || || |||||||| ||||| |||||||| Sbjct 2188 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 2129 Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012 ||| ||| || || || | | || ||| || || || || || || || Sbjct 2128 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 2069 Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 2068 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 2009 Query 105073 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 105132 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 2008 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 1955 Query 105133 GAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 105189 ||| |||||||| ||||| |||| || || || | || | |||||||| || Sbjct 1954 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 1895 Query 105190 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGC 105249 | || || || || || ||| | ||| | || || ||| |||| || ||||| || || Sbjct 1894 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 1838 Query 105250 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 105308 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 1837 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 1778 Query 105309 CGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGG 105368 ||| ||| || |||||||| || ||||||| || | || ||| | || ||| Sbjct 1777 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGCCTCGAACGAGCTCGCCCAGG 1719 Query 105369 TTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTT 105427 | || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 1718 TCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAGCCC 1660 Query 105428 GATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATC 105487 || | |||| | | | | | | ||||||| | ||| | ||||| Sbjct 1659 GACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGCATC 1600 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 || | || || || ||| |||||| |||| || ||||| || ||||| ||| | Sbjct 1599 GCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACCTCG 1540 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 || ||| |||| || || || |||||||| ||||||||||| |||||||| | | | Sbjct 1539 CAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGCCGC 1480 Query 105608 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 105667 | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 1479 ATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAGCGC 1420 Query 105668 GGTCTCTGGTC 105678 || |||||||| Sbjct 1419 GGCCTCTGGTC 1409 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||||||||| ||||| | || ||| |||| | || Sbjct 2958 CCCCCAGCACATGCTCATGCGCGTGGCTGTCGGTCTGCACAAGGACAACATCCCCGCCGT 2899 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| |||||| |||| || | |||| ||||| || || || ||||| Sbjct 2898 GATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACTCCGACGCTCTT 2839 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || | || || | || |||||||| || ||| |||||||| Sbjct 2838 CAACGCCGGCACCCCGCGTCCGCAGCTCTCGTCGTGCTTCCTGCTCACCATGAAGGAGGA 2779 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| | || ||||| | || || | | |||| || | ||||| |||| ||| || Sbjct 2778 CTCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGG 2719 Query 104461 GGGTATTGG 104469 || || || Sbjct 2718 TGGCATCGG 2710 >seq30353 Length=5073 Score = 159 bits (176), Expect = 4e-34 Identities = 698/1091 (64%), Gaps = 24/1091 (2%) Strand=Plus/Plus Query 104597 CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 104656 || ||||| | |||| |||| || ||||| ||||||||||| || | || ||||| Sbjct 2590 CGCAAGGGCGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATTTTTGACTTCCTC 2649 Query 104657 GAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 104716 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 2650 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 2709 Query 104717 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 104776 |||||||| || |||||||||| | | || ||| | | ||| | ||||| ||||| || Sbjct 2710 TGGATTCCCGACCTCTTCATGAGGCGCGTGGAGTCGGGCGGCGACTGGTCGCTCTTCTGC 2769 Query 104777 CCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACA 104836 || || |||| || ||||| | || | ||| ||||||| || | ||| Sbjct 2770 CCCAACGAGGCCCCCGGTCTGTTTGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 2829 Query 104837 AAGTACGAGGAAGAAGGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 104892 |||||| | || || || ||| | ||| ||| | || ||| || ||||| Sbjct 2830 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 2885 Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952 || || ||| |||| || | |||||| || || || |||||||| ||||| |||||||| Sbjct 2886 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 2945 Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012 ||| ||| || || || | | || ||| || || || || || || || Sbjct 2946 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 3005 Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072 || | | | || || ||| ||| ||||| |||||||| || |||| || Sbjct 3006 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTCGCCTCGCTCGCGCT 3065 Query 105073 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 105132 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 3066 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACAAGAAGCTGCACGACGTCGT 3119 Query 105133 GAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 105189 ||| |||||||| ||||| |||| || || || | || | |||||||| || Sbjct 3120 GAAGGTCGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 3179 Query 105190 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGC 105249 | || || || || || ||| | ||| | || || ||| |||| || ||||| || || Sbjct 3180 G---GCCCGAAACTCGAACATGCGCCACAGGCCCATCGGTATCGGAGTGCAGGGCCTGGC 3236 Query 105250 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 105308 || || ||||| | ||| || | | || |||||| || || |||| | Sbjct 3237 TGACGTCTTCATGATCATGCGCTACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 3296 Query 105309 CGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGG 105368 ||| ||| || |||||||| || ||||||| || | || ||| | || ||| Sbjct 3297 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGCCTCGAACGAGCTCGCCCAGG 3355 Query 105369 TTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTT 105427 | || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 3356 TCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAGCCC 3414 Query 105428 GATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATC 105487 || | |||| | | | | | | ||||||| | ||| | ||||| Sbjct 3415 GACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAGCATC 3474 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 || | || || || ||| |||||| |||| || ||||| || ||||| ||| | Sbjct 3475 GCCCAGCACGGCCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACCTCG 3534 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 || ||| |||| || || || |||||||| ||||||||||| |||||||| | | | Sbjct 3535 CAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGCCGC 3594 Query 105608 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 105667 | |||||| || || || | |||||| |||| || || || ||| | || Sbjct 3595 ATCCTCGCCGGCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAGCGC 3654 Query 105668 GGTCTCTGGTC 105678 || |||||||| Sbjct 3655 GGCCTCTGGTC 3665 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||||||||| ||||| | || ||| |||| | || Sbjct 2116 CCCCCAGCACATGCTCATGCGCGTGGCTGTCGGTCTGCACAAGGACAACATCCCCGCCGT 2175 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| |||||| |||| || | |||| ||||| || || || ||||| Sbjct 2176 GATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACTCCGACGCTCTT 2235 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || | || || | || |||||||| || ||| |||||||| Sbjct 2236 CAACGCCGGCACCCCGCGTCCGCAGCTCTCGTCGTGCTTCCTGCTCACCATGAAGGAGGA 2295 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| | || ||||| | || || | | |||| || | ||||| |||| ||| || Sbjct 2296 CTCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGG 2355 Query 104461 GGGTATTGG 104469 || || || Sbjct 2356 TGGCATCGG 2364 >seq52962 Length=211977 Score = 141 bits (156), Expect = 1e-28 Identities = 329/493 (67%), Gaps = 10/493 (2%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||||||||| || || || | || ||| || | ||| || || || ||| Sbjct 111048 CGGTCAAAGCGACCAGGGCGTAGCAAAGCCGGATCCAGAACATCGGGACGGTTGGTAGCG 111107 Query 9584 GCGATGACAACAATACCTGTTTCATTATC---AAAACCATCCATCTCTGTCAAAAGTTGG 9640 || | ||| ||| | |||||| || ||| |||||||| || ||| |||||| Sbjct 111108 GCAA---CAATAATTACGCCTTCATTTTCTTCAAAGCCATCCATTTCCACCAAGAGTTGG 111164 Query 9641 TTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTC 9698 || | ||||| || ||||||||||| | | | || | | |||| || || || Sbjct 111165 TTCAATGTTTGCTCGCGTTCATCATTTCCACCGCCAAGGCCC--GCACCACGATGGCGTC 111222 Query 9699 CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAA 9758 | || |||||||| ||||||||||| || || || || ||| | ||| ||| | Sbjct 111223 CAACCGCATCAATTTCATCAATGAAAACAATACAGGGGGCATTCTTTTTAGCCTGTTCGA 111282 Query 9759 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9818 | | ||| || ||||| |||| || ||||| |||||||| |||||||||| | | | Sbjct 111283 ACATATCACGAACACGGCTGGCACCTACACCGACAAACATTTCCACAAAGTCAGATCCTG 111342 Query 9819 AACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9878 || | |||||| ||||| | |||||| || || | ||| || | | |||||||| Sbjct 111343 AAATGCTAAAGAAGGGCACATTGGCTTCACCTGCGATCGATCGAGCCAATAAAGTCTTAC 111402 Query 9879 CCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGT 9938 |||| || || || | || | |||| || ||||| |||| | | Sbjct 111403 CCGTTCCGGGAGGGCCTACCAGCAAAACACCCCGCGGAATTCGCCCGCCCAACCGTTGGA 111462 Query 9939 ATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAA 9998 || | | ||| | |||||| ||||| || |||||||| | ||| ||||||| | |||| Sbjct 111463 ATTTTTGAGGATCCTTAAGGAAATCAACGATTTCTTCAAGTTCGGCTTTGGCTTCATCAA 111522 Query 9999 TCCCCTCAACATC 10011 | || | ||||| Sbjct 111523 TTCCTGCGACATC 111535 >seq47808 Length=3094 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 94746 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 94800 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 666 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 608 Query 94801 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 94860 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 607 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 548 Query 94861 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 94920 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 547 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 488 Query 94921 ATCTCTCGTGACGAGGGACTCCAC 94944 ||| || |||||||| |||||| Sbjct 487 ATCAGCCGCGACGAGGGCCTCCAC 464 >seq47532 Length=3156 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 94746 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 94800 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 2491 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 2549 Query 94801 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 94860 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 2550 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 2609 Query 94861 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 94920 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 2610 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 2669 Query 94921 ATCTCTCGTGACGAGGGACTCCAC 94944 ||| || |||||||| |||||| Sbjct 2670 ATCAGCCGCGACGAGGGCCTCCAC 2693 >seq38762 Length=2104 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 94746 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 94800 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 1497 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 1439 Query 94801 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 94860 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 1438 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 1379 Query 94861 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 94920 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 1378 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 1319 Query 94921 ATCTCTCGTGACGAGGGACTCCAC 94944 ||| || |||||||| |||||| Sbjct 1318 ATCAGCCGCGACGAGGGCCTCCAC 1295 >seq38761 Length=2091 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 94746 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT----CCTTT 94800 |||| ||||| || || ||||| ||||||||| | | | || |||| |||| Sbjct 1484 TCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCGTCGAGACCTTC 1426 Query 94801 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 94860 || ||||| ||| ||| |||||| || ||||| ||||||||||| || ||||||| Sbjct 1425 GCCGAGCGCCTCATCGGATTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 1366 Query 94861 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 94920 | || | |||||||||||||| || |||||||| || ||| |||| |||||| | Sbjct 1365 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATG 1306 Query 94921 ATCTCTCGTGACGAGGGACTCCAC 94944 ||| || |||||||| |||||| Sbjct 1305 ATCAGCCGCGACGAGGGCCTCCAC 1282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582847107696080