Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq36931 86.0 2e-12 >seq36931 Length=650932 Score = 86.0 bits (94), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 53677 TTCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCG 53736 ||| |||||| ||||||||| |||| ||||||||| ||||| || | |||||| ||||| Sbjct 153335 TTCCTCGCGGAACACGAACAGCACGACGTCGGCGTCCTGCTCGATCGAGCCGGATTCGCG 153394 Query 53737 CAGGTCGCTGAGGACCGGACGCTTGTCGGGGCGAGACTCGCACC 53780 |||||| ||| ||| ||||||||| ||| || || |||| Sbjct 153395 CAGGTCCGAGAGTTGCGGGCGCTTGTCGTCGCGCGATTC-CACC 153437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194687928631324