Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_028843.1 Length=75816 Score E Sequences producing significant alignments: (Bits) Value seq54491 82.4 4e-11 seq27440 82.4 4e-11 >seq54491 Length=272697 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/60 (92%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 66065 GGGATCGAACCCCGGACCCGCTGATTAAAAGTCAGCTGCTCTACCAACTGAGCTA-GCGC 66123 ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 139451 GGGCTCGAACCTGGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTATGCGC 139510 >seq27440 Length=426762 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/60 (92%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 66065 GGGATCGAACCCCGGACCCGCTGATTAAAAGTCAGCTGCTCTACCAACTGAGCTA-GCGC 66123 ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 386803 GGGCTCGAACCTGGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTATGCGC 386744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242318710197174