Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq54335 87.8 2e-12 >seq54335 Length=118188 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 27090 CTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAATCCTAC 27149 |||||||||| ||||||||| | ||| ||||||||| ||||||| | ||||||||||| | Sbjct 14494 CTTAGCTCAGCTGGTAGAGCAACTGATTTGTAATCAGTAGGTCGCGAGTTCGAATCCTGC 14553 Query 27150 AGTCGGCACCA 27160 || |||||||| Sbjct 14554 AGCCGGCACCA 14564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519458499562720